Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_I19
(862 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 5.6
U40187-2|AAA81159.1| 282|Caenorhabditis elegans Collagen protei... 29 5.6
M25479-1|AAA27993.1| 282|Caenorhabditis elegans collagen protein. 29 5.6
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 29 5.6
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 28 9.8
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 461 YVAAAAPSELFLVSLMVGNKFLQDDGEDDEVICS 562
Y+ PS + VS++ G+ D GE E+IC+
Sbjct: 1974 YIEVVEPSRIATVSILGGSSQWFDQGEKGELICT 2007
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 461 YVAAAAPSELFLVSLMVGNKFLQDDGEDDEVICS 562
Y+ PS + VS++ G+ D GE E+IC+
Sbjct: 2067 YIEVVEPSRIATVSILGGSSQWFDQGEKGELICT 2100
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 461 YVAAAAPSELFLVSLMVGNKFLQDDGEDDEVICS 562
Y+ PS + VS++ G+ D GE E+IC+
Sbjct: 1880 YIEVVEPSRIATVSILGGSSQWFDQGEKGELICT 1913
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 461 YVAAAAPSELFLVSLMVGNKFLQDDGEDDEVICS 562
Y+ PS + VS++ G+ D GE E+IC+
Sbjct: 2067 YIEVVEPSRIATVSILGGSSQWFDQGEKGELICT 2100
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 461 YVAAAAPSELFLVSLMVGNKFLQDDGEDDEVICS 562
Y+ PS + VS++ G+ D GE E+IC+
Sbjct: 1974 YIEVVEPSRIATVSILGGSSQWFDQGEKGELICT 2007
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 461 YVAAAAPSELFLVSLMVGNKFLQDDGEDDEVICS 562
Y+ PS + VS++ G+ D GE E+IC+
Sbjct: 2067 YIEVVEPSRIATVSILGGSSQWFDQGEKGELICT 2100
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 461 YVAAAAPSELFLVSLMVGNKFLQDDGEDDEVICS 562
Y+ PS + VS++ G+ D GE E+IC+
Sbjct: 1880 YIEVVEPSRIATVSILGGSSQWFDQGEKGELICT 1913
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 461 YVAAAAPSELFLVSLMVGNKFLQDDGEDDEVICS 562
Y+ PS + VS++ G+ D GE E+IC+
Sbjct: 2067 YIEVVEPSRIATVSILGGSSQWFDQGEKGELICT 2100
>U40187-2|AAA81159.1| 282|Caenorhabditis elegans Collagen protein 8
protein.
Length = 282
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Frame = -2
Query: 858 GEXXPASPXGX-GXXGPGAGXXGPXXQGXXAXXGAGGXQVP 739
G PA G G GP G GP QG GA G P
Sbjct: 153 GPAGPAGDQGRHGPPGPTGGQGGPGEQGDAGRPGAAGRPGP 193
>M25479-1|AAA27993.1| 282|Caenorhabditis elegans collagen protein.
Length = 282
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Frame = -2
Query: 858 GEXXPASPXGX-GXXGPGAGXXGPXXQGXXAXXGAGGXQVP 739
G PA G G GP G GP QG GA G P
Sbjct: 153 GPAGPAGDQGRHGPPGPTGGQGGPGEQGDAGRPGAAGCPGP 193
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 461 YVAAAAPSELFLVSLMVGNKFLQDDGEDDEVICS 562
Y+ PS + VS++ G+ D GE E+IC+
Sbjct: 2066 YIEVVEPSRIATVSILGGSSQWFDQGEKGELICT 2099
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +2
Query: 740 GTWXPPAPXLAXXPXXXGPXXPAPGPXXP*PXGLAGLCSP 859
G + PP P P GP PG P P G G P
Sbjct: 407 GGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGP 446
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,081,315
Number of Sequences: 27780
Number of extensions: 320174
Number of successful extensions: 977
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 968
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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