Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_I18
(879 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC119766-1|AAI19767.1| 220|Homo sapiens chromosome 18 open read... 34 0.78
BC119765-1|AAI19766.1| 220|Homo sapiens chromosome 18 open read... 34 0.78
BC108730-1|AAI08731.1| 220|Homo sapiens chromosome 18 open read... 34 0.78
BC025950-1|AAH25950.2| 227|Homo sapiens C18orf21 protein protein. 34 0.78
AY631401-1|AAT51696.1| 132|Homo sapiens HBV X-transactivated pr... 34 0.78
AF277189-1|AAK07547.1| 130|Homo sapiens PNAS-131 protein. 34 0.78
AF277182-1|AAK07541.1| 132|Homo sapiens PNAS-124 protein. 34 0.78
M74088-1|AAA03586.1| 2843|Homo sapiens APC protein. 31 4.2
M73548-2|AAA60354.1| 2743|Homo sapiens polyposis locus-encoded p... 31 4.2
M73548-1|AAA60353.1| 2844|Homo sapiens polyposis locus-encoded p... 31 4.2
AB210001-1|BAE06083.1| 2845|Homo sapiens APC variant protein pro... 31 4.2
>BC119766-1|AAI19767.1| 220|Homo sapiens chromosome 18 open reading
frame 21 protein.
Length = 220
Score = 33.9 bits (74), Expect = 0.78
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = +1
Query: 541 TIKSPGKTDSEDSLSNENNLKPINYLFKMVRKRKTQMPIQNYNSELKENPEEITNFHKGT 720
T+K GK+ S S N P + L +R+T P + + ++P + F T
Sbjct: 110 TVKHHGKSRSFVSTLKSNPATPTSKLSLKTPERRTANPNHDMSGSKGKSPASV--FRTPT 167
Query: 721 VDTDISNSTSSKTLE-KKHTNAFKLLMDSRNKS 816
+S +S T + KKH + K+L+ S+N+S
Sbjct: 168 SGQSVSTCSSKNTSKTKKHFSQLKMLL-SQNES 199
>BC119765-1|AAI19766.1| 220|Homo sapiens chromosome 18 open reading
frame 21 protein.
Length = 220
Score = 33.9 bits (74), Expect = 0.78
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = +1
Query: 541 TIKSPGKTDSEDSLSNENNLKPINYLFKMVRKRKTQMPIQNYNSELKENPEEITNFHKGT 720
T+K GK+ S S N P + L +R+T P + + ++P + F T
Sbjct: 110 TVKHHGKSRSFVSTLKSNPATPTSKLSLKTPERRTANPNHDMSGSKGKSPASV--FRTPT 167
Query: 721 VDTDISNSTSSKTLE-KKHTNAFKLLMDSRNKS 816
+S +S T + KKH + K+L+ S+N+S
Sbjct: 168 SGQSVSTCSSKNTSKTKKHFSQLKMLL-SQNES 199
>BC108730-1|AAI08731.1| 220|Homo sapiens chromosome 18 open reading
frame 21 protein.
Length = 220
Score = 33.9 bits (74), Expect = 0.78
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = +1
Query: 541 TIKSPGKTDSEDSLSNENNLKPINYLFKMVRKRKTQMPIQNYNSELKENPEEITNFHKGT 720
T+K GK+ S S N P + L +R+T P + + ++P + F T
Sbjct: 110 TVKHHGKSRSFVSTLKSNPATPTSKLSLKTPERRTANPNHDMSGSKGKSPASV--FRTPT 167
Query: 721 VDTDISNSTSSKTLE-KKHTNAFKLLMDSRNKS 816
+S +S T + KKH + K+L+ S+N+S
Sbjct: 168 SGQSVSTCSSKNTSKTKKHFSQLKMLL-SQNES 199
>BC025950-1|AAH25950.2| 227|Homo sapiens C18orf21 protein protein.
Length = 227
Score = 33.9 bits (74), Expect = 0.78
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = +1
Query: 541 TIKSPGKTDSEDSLSNENNLKPINYLFKMVRKRKTQMPIQNYNSELKENPEEITNFHKGT 720
T+K GK+ S S N P + L +R+T P + + ++P + F T
Sbjct: 117 TVKHHGKSRSFVSTLKSNPATPASKLSLKTPERRTANPNHDMSGSKGKSPASV--FRTPT 174
Query: 721 VDTDISNSTSSKTLE-KKHTNAFKLLMDSRNKS 816
+S +S T + KKH + K+L+ S+N+S
Sbjct: 175 SGQSVSTCSSKNTSKTKKHFSQLKMLL-SQNES 206
>AY631401-1|AAT51696.1| 132|Homo sapiens HBV X-transactivated
protein 13 protein.
Length = 132
Score = 33.9 bits (74), Expect = 0.78
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = +1
Query: 541 TIKSPGKTDSEDSLSNENNLKPINYLFKMVRKRKTQMPIQNYNSELKENPEEITNFHKGT 720
T+K GK+ S S N P + L +R+T P + + ++P + F T
Sbjct: 22 TVKHHGKSRSFVSTLKSNPATPASKLSLKTPERRTANPNHDMSGSKGKSPASV--FRTPT 79
Query: 721 VDTDISNSTSSKTLE-KKHTNAFKLLMDSRNKS 816
+S +S T + KKH + K+L+ S+N+S
Sbjct: 80 SGQSVSTCSSKNTSKTKKHFSQLKMLL-SQNES 111
>AF277189-1|AAK07547.1| 130|Homo sapiens PNAS-131 protein.
Length = 130
Score = 33.9 bits (74), Expect = 0.78
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = +1
Query: 541 TIKSPGKTDSEDSLSNENNLKPINYLFKMVRKRKTQMPIQNYNSELKENPEEITNFHKGT 720
T+K GK+ S S N P + L +R+T P + + ++P + F T
Sbjct: 22 TVKHHGKSRSFVSTLKSNPATPTSKLSLKTPERRTANPNHDMSGSKGKSPASV--FRTPT 79
Query: 721 VDTDISNSTSSKTLE-KKHTNAFKLLMDSRNKS 816
+S +S T + KKH + K+L+ S+N+S
Sbjct: 80 SGQSVSTCSSKNTSKTKKHFSQLKMLL-SQNES 111
>AF277182-1|AAK07541.1| 132|Homo sapiens PNAS-124 protein.
Length = 132
Score = 33.9 bits (74), Expect = 0.78
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = +1
Query: 541 TIKSPGKTDSEDSLSNENNLKPINYLFKMVRKRKTQMPIQNYNSELKENPEEITNFHKGT 720
T+K GK+ S S N P + L +R+T P + + ++P + F T
Sbjct: 22 TVKHHGKSRSFVSTLKSNPATPTSKLSLKTPERRTANPNHDMSGSKGKSPASV--FRTPT 79
Query: 721 VDTDISNSTSSKTLE-KKHTNAFKLLMDSRNKS 816
+S +S T + KKH + K+L+ S+N+S
Sbjct: 80 SGQSVSTCSSKNTSKTKKHFSQLKMLL-SQNES 111
>M74088-1|AAA03586.1| 2843|Homo sapiens APC protein.
Length = 2843
Score = 31.5 bits (68), Expect = 4.2
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +1
Query: 532 SSLTIKSPGKTDSEDSLSNENNLKPINYLFKMVRKRKTQMPIQNYNSELKENPEEITNFH 711
SS +I S SE + S + K +N + + ++ Q+ + ++KEN TN
Sbjct: 2569 SSSSILSASSESSEKAKSEDE--KHVNSISGTKQSKENQVSAKGTWRKIKENEFSPTNST 2626
Query: 712 KGTVDTDISNSTSSKTL 762
TV + +N SKTL
Sbjct: 2627 SQTVSSGATNGAESKTL 2643
>M73548-2|AAA60354.1| 2743|Homo sapiens polyposis locus-encoded
protein protein.
Length = 2743
Score = 31.5 bits (68), Expect = 4.2
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +1
Query: 532 SSLTIKSPGKTDSEDSLSNENNLKPINYLFKMVRKRKTQMPIQNYNSELKENPEEITNFH 711
SS +I S SE + S + K +N + + ++ Q+ + ++KEN TN
Sbjct: 2469 SSSSILSASSESSEKAKSEDE--KHVNSISGTKQSKENQVSAKGTWRKIKENEFSPTNST 2526
Query: 712 KGTVDTDISNSTSSKTL 762
TV + +N SKTL
Sbjct: 2527 SQTVSSGATNGAESKTL 2543
>M73548-1|AAA60353.1| 2844|Homo sapiens polyposis locus-encoded
protein protein.
Length = 2844
Score = 31.5 bits (68), Expect = 4.2
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +1
Query: 532 SSLTIKSPGKTDSEDSLSNENNLKPINYLFKMVRKRKTQMPIQNYNSELKENPEEITNFH 711
SS +I S SE + S + K +N + + ++ Q+ + ++KEN TN
Sbjct: 2570 SSSSILSASSESSEKAKSEDE--KHVNSISGTKQSKENQVSAKGTWRKIKENEFSPTNST 2627
Query: 712 KGTVDTDISNSTSSKTL 762
TV + +N SKTL
Sbjct: 2628 SQTVSSGATNGAESKTL 2644
>AB210001-1|BAE06083.1| 2845|Homo sapiens APC variant protein protein.
Length = 2845
Score = 31.5 bits (68), Expect = 4.2
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +1
Query: 532 SSLTIKSPGKTDSEDSLSNENNLKPINYLFKMVRKRKTQMPIQNYNSELKENPEEITNFH 711
SS +I S SE + S + K +N + + ++ Q+ + ++KEN TN
Sbjct: 2571 SSSSILSASSESSEKAKSEDE--KHVNSISGTKQSKENQVSAKGTWRKIKENEFSPTNST 2628
Query: 712 KGTVDTDISNSTSSKTL 762
TV + +N SKTL
Sbjct: 2629 SQTVSSGATNGAESKTL 2645
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,686,032
Number of Sequences: 237096
Number of extensions: 1891792
Number of successful extensions: 3385
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3385
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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