Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_I18
         (879 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical pr...    29   3.3  
AF047661-5|AAU05544.1|  822|Caenorhabditis elegans Hypothetical ...    29   3.3  
Z81454-4|CAD89725.1|  483|Caenorhabditis elegans Hypothetical pr...    28   7.7  
Z54216-2|CAA90945.1|  242|Caenorhabditis elegans Hypothetical pr...    28   7.7  
AC084159-11|ABO16465.1|  449|Caenorhabditis elegans F-box a prot...    28   7.7  

>Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical
           protein T23F1.5 protein.
          Length = 1262

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
 Frame = +1

Query: 532 SSLTIKSPGKTDSEDSL--SNENNLK--PINYLFKMVRKRKTQMPIQNYNSELKENPEEI 699
           SS   KSPG T S D+   SNEN  +  P           KT  PI   +S  +E+ E +
Sbjct: 328 SSTPSKSPGSTSSSDTTPSSNENGKETTPFEMTKNPFNDLKTIRPIYLGSSSDEEDDEPL 387

Query: 700 TNFHKGT 720
            +  K T
Sbjct: 388 EDISKAT 394


>AF047661-5|AAU05544.1|  822|Caenorhabditis elegans Hypothetical
           protein M70.4 protein.
          Length = 822

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 17/54 (31%), Positives = 28/54 (51%)
 Frame = +1

Query: 643 TQMPIQNYNSELKENPEEITNFHKGTVDTDISNSTSSKTLEKKHTNAFKLLMDS 804
           TQM +  Y+ E  EN + ++ FH  +V    SN + +  L    +NAF +  D+
Sbjct: 537 TQMVLVTYDKEYSENADLVSLFHVKSVAIQ-SNGSYNAHLLLSLSNAFSIFPDA 589


>Z81454-4|CAD89725.1|  483|Caenorhabditis elegans Hypothetical
           protein B0391.6 protein.
          Length = 483

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/54 (25%), Positives = 23/54 (42%)
 Frame = +1

Query: 265 TSLIRIPVSYLR*GMTSFCEITSAVIEESIKSKFTKKIHKNHHSFAFVAKHIAH 426
           TS + +P+  +   +     +   +I   +  K    + KNHHS   VA H  H
Sbjct: 167 TSFVDLPIQIVS-DILDGLTVLDRMIVRRVSRKLEALVDKNHHSIKSVAAHSLH 219


>Z54216-2|CAA90945.1|  242|Caenorhabditis elegans Hypothetical
           protein T24H10.3 protein.
          Length = 242

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/53 (26%), Positives = 23/53 (43%)
 Frame = +1

Query: 556 GKTDSEDSLSNENNLKPINYLFKMVRKRKTQMPIQNYNSELKENPEEITNFHK 714
           G  D E    NE+ LK    +FK V K      ++ Y    ++  E + ++ K
Sbjct: 83  GSVDDEAGELNEDALKAWRMIFKKVTKEDIDSFMKTYQGSREQKDELVVHYEK 135


>AC084159-11|ABO16465.1|  449|Caenorhabditis elegans F-box a protein
           protein 221 protein.
          Length = 449

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/54 (25%), Positives = 23/54 (42%)
 Frame = +1

Query: 265 TSLIRIPVSYLR*GMTSFCEITSAVIEESIKSKFTKKIHKNHHSFAFVAKHIAH 426
           TS + +P+  +   +     +   +I   +  K    + KNHHS   VA H  H
Sbjct: 133 TSFVDLPIQIVS-DILDGSTVLDRMIVRRVSRKLEALVDKNHHSIKSVAAHSLH 185


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,057,669
Number of Sequences: 27780
Number of extensions: 338542
Number of successful extensions: 984
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 984
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)