Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_I16
         (945 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0163 + 9070781-9071320                                           30   3.1  
07_01_0678 - 5103836-5104613,5104697-5104888,5104994-5105036,510...    29   5.4  
01_01_1213 - 9769268-9769975                                           29   5.4  
08_01_0171 - 1447782-1447935,1448016-1448480,1448578-1450004           29   7.1  
08_01_0170 - 1440908-1441072,1441539-1441581,1442155-1442619,144...    29   7.1  

>05_03_0163 + 9070781-9071320
          Length = 179

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = +2

Query: 212 GPGSGGGANQRTA--PQWMLPLLLGLYGSVTSALKAARGFWRSLPAKIHVLQKSYY 373
           G  +  GA +  A   QW+   + G+Y  +    +   G++R +P + H + + Y+
Sbjct: 99  GAAAVAGAREEGALGRQWLAASMSGVYRVIPGRYRVIPGWYRMIPDRYHPIPRKYH 154


>07_01_0678 -
           5103836-5104613,5104697-5104888,5104994-5105036,
           5105712-5105835,5105924-5106016,5106754-5106931,
           5107032-5107138,5108098-5108179,5108277-5108314,
           5108409-5108495,5109025-5109135,5109282-5109773
          Length = 774

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 7/58 (12%)
 Frame = -1

Query: 603 IXXNYGRYQNIRNXVFVKNNYXEMNVFKK-------DVPKIHYNRYMYMKKEALETLL 451
           +  N+  + ++   +F   N  E N+ KK       D+ KIH  +   +KK+  E LL
Sbjct: 354 VASNFDEFDDVAEKLFSSRNRTEANLGKKLKIEYLPDIEKIHKKKERLLKKQQREALL 411


>01_01_1213 - 9769268-9769975
          Length = 235

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -3

Query: 133 PRPPKKPPHYFWNSSEAEAAI 71
           P PP  PPH+ W S  A+ AI
Sbjct: 16  PAPPPPPPHHTWLSPAADDAI 36


>08_01_0171 - 1447782-1447935,1448016-1448480,1448578-1450004
          Length = 681

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 7/31 (22%)
 Frame = -3

Query: 184 YQLTFWFFSSSRSFLQK-------PRPPKKP 113
           +QLT W+F SS SF QK       P PP  P
Sbjct: 253 HQLTSWYFKSSSSFEQKLAAKVASPPPPSSP 283


>08_01_0170 -
           1440908-1441072,1441539-1441581,1442155-1442619,
           1442714-1444149
          Length = 702

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 7/31 (22%)
 Frame = -3

Query: 184 YQLTFWFFSSSRSFLQK-------PRPPKKP 113
           +QLT W+F SS SF QK       P PP  P
Sbjct: 256 HQLTSWYFKSSSSFEQKLAAKVASPPPPSSP 286


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,252,142
Number of Sequences: 37544
Number of extensions: 377890
Number of successful extensions: 985
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 984
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2717819680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)