Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_I15
(904 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC037280-1|AAH37280.1| 953|Homo sapiens coatomer protein comple... 221 2e-57
AF111807-1|AAL39009.1| 953|Homo sapiens MSTP026 protein. 221 2e-57
AF084457-1|AAD41240.1| 953|Homo sapiens beta-cop homolog protein. 221 2e-57
BC014146-1|AAH14146.1| 739|Homo sapiens adaptor-related protein... 34 0.81
AL137856-9|CAI19074.1| 262|Homo sapiens adaptor-related protein... 34 0.81
AL137856-5|CAI19072.1| 739|Homo sapiens adaptor-related protein... 34 0.81
AF092094-1|AAD20448.1| 739|Homo sapiens AP-4 adaptor complex be... 34 0.81
AB209817-1|BAD93054.1| 771|Homo sapiens adaptor-related protein... 34 0.81
BC042592-1|AAH42592.1| 1124|Homo sapiens solute carrier family 9... 31 7.6
AL390236-2|CAH73170.1| 2896|Homo sapiens antigen identified by m... 31 7.6
AL390236-1|CAH73169.1| 3256|Homo sapiens antigen identified by m... 31 7.6
AL355529-2|CAI16903.1| 2896|Homo sapiens antigen identified by m... 31 7.6
AL355529-1|CAI16902.1| 3256|Homo sapiens antigen identified by m... 31 7.6
AL139142-3|CAI20938.1| 1124|Homo sapiens solute carrier family 9... 31 7.6
X65551-1|CAA46520.1| 2896|Homo sapiens antigen of the monoclonal... 30 10.0
X65550-1|CAA46519.1| 3256|Homo sapiens antigen of the monoclonal... 30 10.0
>BC037280-1|AAH37280.1| 953|Homo sapiens coatomer protein complex,
subunit beta 1 protein.
Length = 953
Score = 221 bits (541), Expect = 2e-57
Identities = 105/133 (78%), Positives = 113/133 (84%)
Frame = +1
Query: 229 MAVVEQPCYTLINFPTDLEPCNEMQLKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLM 408
M E CYTLIN P D EP +E+ LK DLEKGD K K EALKK I +IL+GEK+PGLLM
Sbjct: 1 MTAAENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLM 60
Query: 409 IIIRFVLPLQDHMIKKLLLIFWEIVPKTSPDGKLLQEMILVCDAYRKDLQHPNEFIRGST 588
IIRFVLPLQDH IKKLLL+FWEIVPKT+PDG+LL EMILVCDAYRKDLQHPNEFIRGST
Sbjct: 61 TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGST 120
Query: 589 LRFLCKLKEPELL 627
LRFLCKLKE ELL
Sbjct: 121 LRFLCKLKEAELL 133
Score = 45.6 bits (103), Expect = 2e-04
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +2
Query: 638 MPAIRACLEHRHSYVRRNA 694
MPAIRACLEHRHSYVRRNA
Sbjct: 137 MPAIRACLEHRHSYVRRNA 155
>AF111807-1|AAL39009.1| 953|Homo sapiens MSTP026 protein.
Length = 953
Score = 221 bits (541), Expect = 2e-57
Identities = 105/133 (78%), Positives = 113/133 (84%)
Frame = +1
Query: 229 MAVVEQPCYTLINFPTDLEPCNEMQLKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLM 408
M E CYTLIN P D EP +E+ LK DLEKGD K K EALKK I +IL+GEK+PGLLM
Sbjct: 1 MTAAENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLM 60
Query: 409 IIIRFVLPLQDHMIKKLLLIFWEIVPKTSPDGKLLQEMILVCDAYRKDLQHPNEFIRGST 588
IIRFVLPLQDH IKKLLL+FWEIVPKT+PDG+LL EMILVCDAYRKDLQHPNEFIRGST
Sbjct: 61 TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGST 120
Query: 589 LRFLCKLKEPELL 627
LRFLCKLKE ELL
Sbjct: 121 LRFLCKLKEAELL 133
Score = 45.6 bits (103), Expect = 2e-04
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +2
Query: 638 MPAIRACLEHRHSYVRRNA 694
MPAIRACLEHRHSYVRRNA
Sbjct: 137 MPAIRACLEHRHSYVRRNA 155
>AF084457-1|AAD41240.1| 953|Homo sapiens beta-cop homolog protein.
Length = 953
Score = 221 bits (541), Expect = 2e-57
Identities = 105/133 (78%), Positives = 113/133 (84%)
Frame = +1
Query: 229 MAVVEQPCYTLINFPTDLEPCNEMQLKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLM 408
M E CYTLIN P D EP +E+ LK DLEKGD K K EALKK I +IL+GEK+PGLLM
Sbjct: 1 MTAAENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLM 60
Query: 409 IIIRFVLPLQDHMIKKLLLIFWEIVPKTSPDGKLLQEMILVCDAYRKDLQHPNEFIRGST 588
IIRFVLPLQDH IKKLLL+FWEIVPKT+PDG+LL EMILVCDAYRKDLQHPNEFIRGST
Sbjct: 61 TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGST 120
Query: 589 LRFLCKLKEPELL 627
LRFLCKLKE ELL
Sbjct: 121 LRFLCKLKEAELL 133
Score = 45.6 bits (103), Expect = 2e-04
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +2
Query: 638 MPAIRACLEHRHSYVRRNA 694
MPAIRACLEHRHSYVRRNA
Sbjct: 137 MPAIRACLEHRHSYVRRNA 155
>BC014146-1|AAH14146.1| 739|Homo sapiens adaptor-related protein
complex 4, beta 1 subunit protein.
Length = 739
Score = 33.9 bits (74), Expect = 0.81
Identities = 26/99 (26%), Positives = 45/99 (45%)
Frame = +1
Query: 322 KGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFVLPLQDHMIKKLLLIFWEIVPKTSPD 501
+ D + +++ I + G + G+ M +++ + D + KKL+ ++ PD
Sbjct: 23 QADRLRYRNVIQRVIRYMTQGLDMSGVFMEMVKASATV-DIVQKKLVYLYMCTYAPLKPD 81
Query: 502 GKLLQEMILVCDAYRKDLQHPNEFIRGSTLRFLCKLKEP 618
LL L C KD PN +RG LR +C L+ P
Sbjct: 82 LALLAINTL-C----KDCSDPNPMVRGLALRSMCSLRMP 115
>AL137856-9|CAI19074.1| 262|Homo sapiens adaptor-related protein
complex 4, beta 1 subunit protein.
Length = 262
Score = 33.9 bits (74), Expect = 0.81
Identities = 26/99 (26%), Positives = 45/99 (45%)
Frame = +1
Query: 322 KGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFVLPLQDHMIKKLLLIFWEIVPKTSPD 501
+ D + +++ I + G + G+ M +++ + D + KKL+ ++ PD
Sbjct: 23 QADRLRYRNVIQRVIRYMTQGLDMSGVFMEMVKASATV-DIVQKKLVYLYMCTYAPLKPD 81
Query: 502 GKLLQEMILVCDAYRKDLQHPNEFIRGSTLRFLCKLKEP 618
LL L C KD PN +RG LR +C L+ P
Sbjct: 82 LALLAINTL-C----KDCSDPNPMVRGLALRSMCSLRMP 115
>AL137856-5|CAI19072.1| 739|Homo sapiens adaptor-related protein
complex 4, beta 1 subunit protein.
Length = 739
Score = 33.9 bits (74), Expect = 0.81
Identities = 26/99 (26%), Positives = 45/99 (45%)
Frame = +1
Query: 322 KGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFVLPLQDHMIKKLLLIFWEIVPKTSPD 501
+ D + +++ I + G + G+ M +++ + D + KKL+ ++ PD
Sbjct: 23 QADRLRYRNVIQRVIRYMTQGLDMSGVFMEMVKASATV-DIVQKKLVYLYMCTYAPLKPD 81
Query: 502 GKLLQEMILVCDAYRKDLQHPNEFIRGSTLRFLCKLKEP 618
LL L C KD PN +RG LR +C L+ P
Sbjct: 82 LALLAINTL-C----KDCSDPNPMVRGLALRSMCSLRMP 115
>AF092094-1|AAD20448.1| 739|Homo sapiens AP-4 adaptor complex beta4
subunit protein.
Length = 739
Score = 33.9 bits (74), Expect = 0.81
Identities = 26/99 (26%), Positives = 45/99 (45%)
Frame = +1
Query: 322 KGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFVLPLQDHMIKKLLLIFWEIVPKTSPD 501
+ D + +++ I + G + G+ M +++ + D + KKL+ ++ PD
Sbjct: 23 QADRLRYRNVIQRVIRYMTQGLDMSGVFMEMVKASATV-DIVQKKLVYLYMCTYAPLKPD 81
Query: 502 GKLLQEMILVCDAYRKDLQHPNEFIRGSTLRFLCKLKEP 618
LL L C KD PN +RG LR +C L+ P
Sbjct: 82 LALLAINTL-C----KDCSDPNPMVRGLALRSMCSLRMP 115
>AB209817-1|BAD93054.1| 771|Homo sapiens adaptor-related protein
complex 4, beta 1 subunit variant protein.
Length = 771
Score = 33.9 bits (74), Expect = 0.81
Identities = 26/99 (26%), Positives = 45/99 (45%)
Frame = +1
Query: 322 KGDTKKKIEALKKTIGIILSGEKIPGLLMIIIRFVLPLQDHMIKKLLLIFWEIVPKTSPD 501
+ D + +++ I + G + G+ M +++ + D + KKL+ ++ PD
Sbjct: 55 QADRLRYRNVIQRVIRYMTQGLDMSGVFMEMVKASATV-DIVQKKLVYLYMCTYAPLKPD 113
Query: 502 GKLLQEMILVCDAYRKDLQHPNEFIRGSTLRFLCKLKEP 618
LL L C KD PN +RG LR +C L+ P
Sbjct: 114 LALLAINTL-C----KDCSDPNPMVRGLALRSMCSLRMP 147
>BC042592-1|AAH42592.1| 1124|Homo sapiens solute carrier family 9,
member 11 protein.
Length = 1124
Score = 30.7 bits (66), Expect = 7.6
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Frame = +1
Query: 400 LLMIIIRFVLPLQDHMIKKLLLIFWEIVP---KTSPDGKLLQEMILVCDA-YRK 549
L II+ ++ + D IKK L + + I K+ D KLL + I VC++ Y+K
Sbjct: 719 LFKIIVPILIRIADVQIKKRLSLMYSITKGYIKSQEDAKLLIKQIAVCESIYQK 772
>AL390236-2|CAH73170.1| 2896|Homo sapiens antigen identified by
monoclonal antibody Ki-67 protein.
Length = 2896
Score = 30.7 bits (66), Expect = 7.6
Identities = 35/154 (22%), Positives = 62/154 (40%), Gaps = 4/154 (2%)
Frame = +1
Query: 241 EQPCYTLINFPTDLEPCNEMQLKLDLEKGDTKKKIEALKK---TIGIILSGEKIP-GLLM 408
+ PC + D Q K LEK D +K++ ALKK T G +K+P G
Sbjct: 1010 KMPCESSPPESADTPTSTRRQPKTPLEKRDVQKELSALKKLTQTSGETTHTDKVPGGEDK 1069
Query: 409 IIIRFVLPLQDHMIKKLLLIFWEIVPKTSPDGKLLQEMILVCDAYRKDLQHPNEFIRGST 588
I F + + + + PKT + L+++ + + ++ + T
Sbjct: 1070 SINAFRETAKQKLDPAASVTGSKRHPKTKEKAQPLEDLAGLKELFQTPVCTDKPTTHEKT 1129
Query: 589 LRFLCKLKEPELLXTPNASHTGLSRAQTFVCQEE 690
+ C+ +P+ + TP +S R+ V EE
Sbjct: 1130 TKIACR-SQPDPVDTPTSSKPQSKRSLRKVDVEE 1162
>AL390236-1|CAH73169.1| 3256|Homo sapiens antigen identified by
monoclonal antibody Ki-67 protein.
Length = 3256
Score = 30.7 bits (66), Expect = 7.6
Identities = 35/154 (22%), Positives = 62/154 (40%), Gaps = 4/154 (2%)
Frame = +1
Query: 241 EQPCYTLINFPTDLEPCNEMQLKLDLEKGDTKKKIEALKK---TIGIILSGEKIP-GLLM 408
+ PC + D Q K LEK D +K++ ALKK T G +K+P G
Sbjct: 1370 KMPCESSPPESADTPTSTRRQPKTPLEKRDVQKELSALKKLTQTSGETTHTDKVPGGEDK 1429
Query: 409 IIIRFVLPLQDHMIKKLLLIFWEIVPKTSPDGKLLQEMILVCDAYRKDLQHPNEFIRGST 588
I F + + + + PKT + L+++ + + ++ + T
Sbjct: 1430 SINAFRETAKQKLDPAASVTGSKRHPKTKEKAQPLEDLAGLKELFQTPVCTDKPTTHEKT 1489
Query: 589 LRFLCKLKEPELLXTPNASHTGLSRAQTFVCQEE 690
+ C+ +P+ + TP +S R+ V EE
Sbjct: 1490 TKIACR-SQPDPVDTPTSSKPQSKRSLRKVDVEE 1522
>AL355529-2|CAI16903.1| 2896|Homo sapiens antigen identified by
monoclonal antibody Ki-67 protein.
Length = 2896
Score = 30.7 bits (66), Expect = 7.6
Identities = 35/154 (22%), Positives = 62/154 (40%), Gaps = 4/154 (2%)
Frame = +1
Query: 241 EQPCYTLINFPTDLEPCNEMQLKLDLEKGDTKKKIEALKK---TIGIILSGEKIP-GLLM 408
+ PC + D Q K LEK D +K++ ALKK T G +K+P G
Sbjct: 1010 KMPCESSPPESADTPTSTRRQPKTPLEKRDVQKELSALKKLTQTSGETTHTDKVPGGEDK 1069
Query: 409 IIIRFVLPLQDHMIKKLLLIFWEIVPKTSPDGKLLQEMILVCDAYRKDLQHPNEFIRGST 588
I F + + + + PKT + L+++ + + ++ + T
Sbjct: 1070 SINAFRETAKQKLDPAASVTGSKRHPKTKEKAQPLEDLAGLKELFQTPVCTDKPTTHEKT 1129
Query: 589 LRFLCKLKEPELLXTPNASHTGLSRAQTFVCQEE 690
+ C+ +P+ + TP +S R+ V EE
Sbjct: 1130 TKIACR-SQPDPVDTPTSSKPQSKRSLRKVDVEE 1162
>AL355529-1|CAI16902.1| 3256|Homo sapiens antigen identified by
monoclonal antibody Ki-67 protein.
Length = 3256
Score = 30.7 bits (66), Expect = 7.6
Identities = 35/154 (22%), Positives = 62/154 (40%), Gaps = 4/154 (2%)
Frame = +1
Query: 241 EQPCYTLINFPTDLEPCNEMQLKLDLEKGDTKKKIEALKK---TIGIILSGEKIP-GLLM 408
+ PC + D Q K LEK D +K++ ALKK T G +K+P G
Sbjct: 1370 KMPCESSPPESADTPTSTRRQPKTPLEKRDVQKELSALKKLTQTSGETTHTDKVPGGEDK 1429
Query: 409 IIIRFVLPLQDHMIKKLLLIFWEIVPKTSPDGKLLQEMILVCDAYRKDLQHPNEFIRGST 588
I F + + + + PKT + L+++ + + ++ + T
Sbjct: 1430 SINAFRETAKQKLDPAASVTGSKRHPKTKEKAQPLEDLAGLKELFQTPVCTDKPTTHEKT 1489
Query: 589 LRFLCKLKEPELLXTPNASHTGLSRAQTFVCQEE 690
+ C+ +P+ + TP +S R+ V EE
Sbjct: 1490 TKIACR-SQPDPVDTPTSSKPQSKRSLRKVDVEE 1522
>AL139142-3|CAI20938.1| 1124|Homo sapiens solute carrier family 9,
member 11 protein.
Length = 1124
Score = 30.7 bits (66), Expect = 7.6
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Frame = +1
Query: 400 LLMIIIRFVLPLQDHMIKKLLLIFWEIVP---KTSPDGKLLQEMILVCDA-YRK 549
L II+ ++ + D IKK L + + I K+ D KLL + I VC++ Y+K
Sbjct: 719 LFKIIVPILIRIADVQIKKRLSLMYSITKGYIKSQEDAKLLIKQIAVCESIYQK 772
>X65551-1|CAA46520.1| 2896|Homo sapiens antigen of the monoclonal
antibody Ki-67 protein.
Length = 2896
Score = 30.3 bits (65), Expect = 10.0
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +1
Query: 241 EQPCYTLINFPTDLEPCNEMQLKLDLEKGDTKKKIEALKK---TIGIILSGEKIPG 399
+ PC + D Q K LEK D +K++ ALKK T G +K+PG
Sbjct: 1010 KMPCESSPPESADTPTSTRRQPKTPLEKRDVQKELSALKKLTQTSGETTHTDKVPG 1065
>X65550-1|CAA46519.1| 3256|Homo sapiens antigen of the monoclonal
antibody Ki-67 protein.
Length = 3256
Score = 30.3 bits (65), Expect = 10.0
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +1
Query: 241 EQPCYTLINFPTDLEPCNEMQLKLDLEKGDTKKKIEALKK---TIGIILSGEKIPG 399
+ PC + D Q K LEK D +K++ ALKK T G +K+PG
Sbjct: 1370 KMPCESSPPESADTPTSTRRQPKTPLEKRDVQKELSALKKLTQTSGETTHTDKVPG 1425
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,743,959
Number of Sequences: 237096
Number of extensions: 2216535
Number of successful extensions: 3711
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3711
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11659288620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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