Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_I10
         (887 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L29440-1|AAA98752.1|  570|Caenorhabditis elegans endoprotease pr...    30   1.9  
Z81101-6|CAE53732.1|  840|Caenorhabditis elegans Hypothetical pr...    29   5.9  
Z81101-5|CAB03199.3|  705|Caenorhabditis elegans Hypothetical pr...    29   5.9  
AB125702-1|BAD01496.1|  705|Caenorhabditis elegans D2-like dopam...    29   5.9  
AB125701-1|BAD01495.1|  840|Caenorhabditis elegans D2-like dopam...    29   5.9  
Z78016-5|CAB01442.2|  479|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>L29440-1|AAA98752.1|  570|Caenorhabditis elegans endoprotease
           protein.
          Length = 570

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +3

Query: 294 EAAMASFEDLAFDWATLCQECPECWTESDKA 386
           E+A +SF DL   W   C EC    TES  A
Sbjct: 287 ESARSSFPDLTSGWKLSCDECNGGCTESSSA 317


>Z81101-6|CAE53732.1|  840|Caenorhabditis elegans Hypothetical
           protein K09G1.4b protein.
          Length = 840

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 18/42 (42%), Positives = 22/42 (52%)
 Frame = +3

Query: 495 RDKTAHVKMSPINSSNSTTPRKNY*KVPGPIKMMVMQTHTES 620
           RDKT   K S I ++  T P K Y +V  PI     QT TE+
Sbjct: 530 RDKTDIKKHSMILANPITEPPKEYRRVSMPIHPTNSQTETET 571


>Z81101-5|CAB03199.3|  705|Caenorhabditis elegans Hypothetical
           protein K09G1.4a protein.
          Length = 705

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 18/42 (42%), Positives = 22/42 (52%)
 Frame = +3

Query: 495 RDKTAHVKMSPINSSNSTTPRKNY*KVPGPIKMMVMQTHTES 620
           RDKT   K S I ++  T P K Y +V  PI     QT TE+
Sbjct: 395 RDKTDIKKHSMILANPITEPPKEYRRVSMPIHPTNSQTETET 436


>AB125702-1|BAD01496.1|  705|Caenorhabditis elegans D2-like dopamine
           receptor shortvariant protein.
          Length = 705

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 18/42 (42%), Positives = 22/42 (52%)
 Frame = +3

Query: 495 RDKTAHVKMSPINSSNSTTPRKNY*KVPGPIKMMVMQTHTES 620
           RDKT   K S I ++  T P K Y +V  PI     QT TE+
Sbjct: 395 RDKTDIKKHSMILANPITEPPKEYRRVSMPIHPTNSQTETET 436


>AB125701-1|BAD01495.1|  840|Caenorhabditis elegans D2-like dopamine
           receptor longvariant protein.
          Length = 840

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 18/42 (42%), Positives = 22/42 (52%)
 Frame = +3

Query: 495 RDKTAHVKMSPINSSNSTTPRKNY*KVPGPIKMMVMQTHTES 620
           RDKT   K S I ++  T P K Y +V  PI     QT TE+
Sbjct: 530 RDKTDIKKHSMILANPITEPPKEYRRVSMPIHPTNSQTETET 571


>Z78016-5|CAB01442.2|  479|Caenorhabditis elegans Hypothetical
           protein R186.5 protein.
          Length = 479

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +3

Query: 489 LHRDKTA-HVKMSPINSSNSTTPRKNY*KVP 578
           L  D+ A HVK +P+ +SN  T RKN    P
Sbjct: 436 LSMDQVAQHVKHAPVRNSNGPTQRKNMENTP 466


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,816,988
Number of Sequences: 27780
Number of extensions: 326958
Number of successful extensions: 822
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 822
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)