Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_I03
         (1049 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    36   0.002
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    33   0.019
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    31   0.057
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   3.8  

>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 36.3 bits (80), Expect = 0.002
 Identities = 36/128 (28%), Positives = 39/128 (30%), Gaps = 1/128 (0%)
 Frame = -1

Query: 848 GXXGGXGP-GPRGAXXRXGGXQGXXGXXGXXXXGXXGGXRAGAXGGGXAPXGXPXGGXGG 672
           G  G  GP GPRG     G  +G  G  G    G  G  R G  G    P     G  G 
Sbjct: 45  GPPGAPGPVGPRGLTGHRG-EKGNSGPVGPP--GAPG--RDGMPGAPGLPGSK--GVKGD 97

Query: 671 PRXKXXGXAPXXXGGRXXAXAGGXGGXXPXRXPTXXGAXRXPRXXGGXXXXPPPGXXXGX 492
           P     G              G  GG      P   G+   P   G      PPG     
Sbjct: 98  PGLSMVGPPGPKGNPGLRGPKGERGGMGDRGDPGLPGSLGYPGEKGDLGTPGPPGYPGDV 157

Query: 491 GPRGRXXP 468
           GP+G   P
Sbjct: 158 GPKGEPGP 165



 Score = 26.6 bits (56), Expect = 1.2
 Identities = 36/132 (27%), Positives = 39/132 (29%), Gaps = 7/132 (5%)
 Frame = -1

Query: 854 PXGXXGGXG-PGPRGAXXRXG--GXQGXXGXXGXXXX-GXXG--GXRAGAXGGGXAPXGX 693
           P G  G  G PG +G     G  G QG  G  G     G  G  G R      G      
Sbjct: 10  PQGLQGEKGAPGIQGIRGDKGEMGEQGRTGAQGNAGPPGAPGPVGPRGLTGHRGEKGNSG 69

Query: 692 PXGGXGGPRXKXXGXAPXXXGGRXXAXAGGXGGXXPXRXPTXXGAXRXPR-XXGGXXXXP 516
           P G  G P       AP   G +      G     P   P      R P+   GG     
Sbjct: 70  PVGPPGAPGRDGMPGAPGLPGSKGVKGDPGLSMVGPP-GPKGNPGLRGPKGERGGMGDRG 128

Query: 515 PPGXXXGXGPRG 480
            PG     G  G
Sbjct: 129 DPGLPGSLGYPG 140



 Score = 25.0 bits (52), Expect = 3.8
 Identities = 19/57 (33%), Positives = 22/57 (38%), Gaps = 3/57 (5%)
 Frame = -3

Query: 537 GGPXXXAPAGXXXGGGAPGXXG--XXEGXRDXXTPXGXGNAPXQTPREGA-XXPXPR 376
           G P    PAG     GAPG  G    EG R      G      +  R+GA   P P+
Sbjct: 731 GLPGLAGPAGIPGAPGAPGEMGLRGFEGARGLQGLRGDVGPEGRPGRDGAPGLPGPK 787


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 32.7 bits (71), Expect = 0.019
 Identities = 27/87 (31%), Positives = 28/87 (32%), Gaps = 3/87 (3%)
 Frame = -1

Query: 848 GXXGGXGPGPRGAXXRXGGXQGXXGXXGXXXXGXXGGXRAGAXGGGXAPXGXPX---GGX 678
           G  GG G G   A  R    Q           G  GG   GA GGG    G P    GG 
Sbjct: 172 GGGGGGGAGSFAAALRNLAKQADVKEDEPGAGG--GGSGGGAPGGGGGSSGGPGPGGGGG 229

Query: 677 GGPRXKXXGXAPXXXGGRXXAXAGGXG 597
           GG R +          G      GG G
Sbjct: 230 GGGRDRDHRDRDREREGGGNGGGGGGG 256


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 31.1 bits (67), Expect = 0.057
 Identities = 18/52 (34%), Positives = 19/52 (36%)
 Frame = -1

Query: 752 GXXGGXRAGAXGGGXAPXGXPXGGXGGPRXKXXGXAPXXXGGRXXAXAGGXG 597
           G  GG  AGA GGG    G P    G       G      GG     +GG G
Sbjct: 813 GNGGGGGAGASGGGFLITGDPSDTIGAGGGGAGGPLRGSSGGAGGGSSGGGG 864



 Score = 25.0 bits (52), Expect = 3.8
 Identities = 16/49 (32%), Positives = 17/49 (34%)
 Frame = -1

Query: 776 GXXGXXXXGXXGGXRAGAXGGGXAPXGXPXGGXGGPRXKXXGXAPXXXG 630
           G  G       G   +G  GGG A  G P GG G       G A    G
Sbjct: 674 GAVGGGSGAGGGAGSSGGSGGGLAS-GSPYGGGGHHLSHHHGGAAAATG 721


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.0 bits (52), Expect = 3.8
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = +2

Query: 668 GGPXPPPXAXPXGXXPPXGPPXXXPP 745
           GGP  PP   P G      PP   PP
Sbjct: 525 GGPLGPPPPPPPGGAVLNIPPQFLPP 550



 Score = 24.2 bits (50), Expect = 6.6
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = +1

Query: 481 PRGPXPXXXPGGGXXXXPP 537
           P GP P   PGG     PP
Sbjct: 527 PLGPPPPPPPGGAVLNIPP 545


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 497,521
Number of Sequences: 2352
Number of extensions: 6888
Number of successful extensions: 36
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 116752116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)