Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_I02
(929 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 33 0.38
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 32 0.51
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 32 0.51
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 0.89
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 31 1.6
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 31 1.6
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.6
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.6
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.6
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.1
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 30 2.7
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 3.6
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 3.6
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 3.6
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 3.6
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 29 3.6
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 3.6
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 29 3.6
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 4.7
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 4.7
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 6.3
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 6.3
AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical ... 29 6.3
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 28 8.3
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 32.7 bits (71), Expect = 0.38
Identities = 22/77 (28%), Positives = 24/77 (31%), Gaps = 5/77 (6%)
Frame = +1
Query: 694 PXGXXXYPAFPXXXPXXPPPXRXXXXXGXXXGXAPPP--EXXXXXXXPP---XXXPXPXX 858
P G YP P PPP + G PPP + PP P
Sbjct: 709 PPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPPMFQQGFNAGAPPPPFGRGAGPMS 768
Query: 859 XFPPXXRXXXXTPPLPP 909
FPP R P PP
Sbjct: 769 SFPPPPRGGMHHMPPPP 785
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 32.3 bits (70), Expect = 0.51
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Frame = -2
Query: 559 GGGAPDXVDXXXPAGGGGXX--AXXSRPP---XPPAPVXXGXGXAPXY 431
GGGAP GGGG A + PP PPAP+ G G A +
Sbjct: 36 GGGAPPCSSSSYATGGGGGSYAAAPALPPPPPPPPAPIGGGAGYAAPF 83
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 32.3 bits (70), Expect = 0.51
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Frame = -2
Query: 559 GGGAPDXVDXXXPAGGGGXX--AXXSRPP---XPPAPVXXGXGXAPXY 431
GGGAP GGGG A + PP PPAP+ G G A +
Sbjct: 36 GGGAPPCSSSSYATGGGGGSYAAAPALPPPPPPPPAPIGGGAGYAAPF 83
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.5 bits (68), Expect = 0.89
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = -1
Query: 869 GGKXXXGXGXXXGGXXXXXXXSGGGAXPXXXPXXXXXLXGGGXXGXXXGNAG 714
GG G G GG GGG P P GGG G G G
Sbjct: 27 GGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGG 78
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/71 (30%), Positives = 22/71 (30%)
Frame = -1
Query: 926 GXAPXXGGRGGVXXXXRXXGGKXXXGXGXXXGGXXXXXXXSGGGAXPXXXPXXXXXLXGG 747
G GG GG GG G G GG GGG P P GG
Sbjct: 68 GGGGCGGGGGGCGGGGGCGGGGGGCGGG---GGGCGGGGGCGGGCAPPPPPPACGGGCGG 124
Query: 746 GXXGXXXGNAG 714
G G G G
Sbjct: 125 GGGGCGGGCGG 135
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/65 (29%), Positives = 19/65 (29%)
Frame = -1
Query: 908 GGRGGVXXXXRXXGGKXXXGXGXXXGGXXXXXXXSGGGAXPXXXPXXXXXLXGGGXXGXX 729
GG GG GG G G G GGG P GGG G
Sbjct: 67 GGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGG 126
Query: 728 XGNAG 714
G G
Sbjct: 127 GGCGG 131
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +3
Query: 471 GGXGGRLXXAXXPPPPAGXXXSTXSGAPPP 560
GG GG + PPP G S + APPP
Sbjct: 667 GGLGGFMPPPPPPPPMPGDLSSLLAAAPPP 696
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +3
Query: 471 GGXGGRLXXAXXPPPPAGXXXSTXSGAPPP 560
GG GG + PPP G S + APPP
Sbjct: 667 GGLGGFMPPPPPPPPMPGDLSSLLAAAPPP 696
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/68 (27%), Positives = 22/68 (32%)
Frame = +1
Query: 724 PXXXPXXPPPXRXXXXXGXXXGXAPPPEXXXXXXXPPXXXPXPXXXFPPXXRXXXXTPPL 903
P P PPP + G PPP P P P P +PP
Sbjct: 233 PAGSPPPPPPPKGSPPLA-GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP- 290
Query: 904 PPXXGAXP 927
PP G+ P
Sbjct: 291 PPRAGSPP 298
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/47 (29%), Positives = 15/47 (31%)
Frame = +1
Query: 787 GXAPPPEXXXXXXXPPXXXPXPXXXFPPXXRXXXXTPPLPPXXGAXP 927
G PPP P P P P PP PP G+ P
Sbjct: 262 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 308
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +3
Query: 507 PPPPAGXXXSTXSGAPPPKXXVXXXP 584
PPPP G SG+PPP P
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPP 265
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/68 (27%), Positives = 22/68 (32%)
Frame = +1
Query: 724 PXXXPXXPPPXRXXXXXGXXXGXAPPPEXXXXXXXPPXXXPXPXXXFPPXXRXXXXTPPL 903
P P PPP + G PPP P P P P +PP
Sbjct: 254 PAGSPPPPPPPKGSPPLA-GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP- 311
Query: 904 PPXXGAXP 927
PP G+ P
Sbjct: 312 PPRAGSPP 319
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/47 (29%), Positives = 15/47 (31%)
Frame = +1
Query: 787 GXAPPPEXXXXXXXPPXXXPXPXXXFPPXXRXXXXTPPLPPXXGAXP 927
G PPP P P P P PP PP G+ P
Sbjct: 283 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 329
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +3
Query: 507 PPPPAGXXXSTXSGAPPPKXXVXXXP 584
PPPP G SG+PPP P
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPP 286
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/68 (27%), Positives = 22/68 (32%)
Frame = +1
Query: 724 PXXXPXXPPPXRXXXXXGXXXGXAPPPEXXXXXXXPPXXXPXPXXXFPPXXRXXXXTPPL 903
P P PPP + G PPP P P P P +PP
Sbjct: 239 PAGSPPPPPPPKGSPPLA-GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP- 296
Query: 904 PPXXGAXP 927
PP G+ P
Sbjct: 297 PPRAGSPP 304
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/47 (29%), Positives = 15/47 (31%)
Frame = +1
Query: 787 GXAPPPEXXXXXXXPPXXXPXPXXXFPPXXRXXXXTPPLPPXXGAXP 927
G PPP P P P P PP PP G+ P
Sbjct: 268 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 314
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +3
Query: 507 PPPPAGXXXSTXSGAPPPKXXVXXXP 584
PPPP G SG+PPP P
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPP 271
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -2
Query: 559 GGGAPDXVDXXXPAGGGGXXAXXSRPPXPPAP 464
GGG +GGGG A + PP PP P
Sbjct: 277 GGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPP 308
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -2
Query: 559 GGGAPDXVDXXXPAGGGGXXAXXSRPPXPPAP 464
GGG +GGGG A + PP PP P
Sbjct: 277 GGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPP 308
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/66 (28%), Positives = 20/66 (30%)
Frame = -1
Query: 908 GGRGGVXXXXRXXGGKXXXGXGXXXGGXXXXXXXSGGGAXPXXXPXXXXXLXGGGXXGXX 729
GG GG GG G G G GGG + GGG G
Sbjct: 150 GGYGGGGGGGGDFGGYGGGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGGGG 209
Query: 728 XGNAGY 711
G GY
Sbjct: 210 MGGGGY 215
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/57 (28%), Positives = 18/57 (31%)
Frame = +3
Query: 747 PPXKXXXXXGXPXRXGPPPGXXXXSPXSPXXXPPXXLXFPXXXSXXXXNXPPPPXGG 917
PP G PPP +P S PP + S PPPP G
Sbjct: 489 PPPPMPSINGHAPNPPPPPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPPPPVG 545
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/71 (28%), Positives = 21/71 (29%)
Frame = -1
Query: 926 GXAPXXGGRGGVXXXXRXXGGKXXXGXGXXXGGXXXXXXXSGGGAXPXXXPXXXXXLXGG 747
G + GGRGG G G G GG GGG GG
Sbjct: 60 GGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGG 119
Query: 746 GXXGXXXGNAG 714
G G G G
Sbjct: 120 GRGGGGGGRGG 130
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/69 (28%), Positives = 23/69 (33%)
Frame = +3
Query: 711 IPGVSPXXPXXAPPXKXXXXXGXPXRXGPPPGXXXXSPXSPXXXPPXXLXFPXXXSXXXX 890
+P ++ P PP G P PP G S P PP P
Sbjct: 719 LPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP------- 771
Query: 891 NXPPPPXGG 917
PPPP GG
Sbjct: 772 -PPPPPPGG 779
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +3
Query: 462 TGAGGXGGRLXXAXXPPPPAGXXXSTXSGAPPP 560
T AGG PPPP G T PPP
Sbjct: 698 TSAGGSSALPPITGGPPPPPGLPPITGGPPPPP 730
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/69 (28%), Positives = 23/69 (33%)
Frame = +3
Query: 711 IPGVSPXXPXXAPPXKXXXXXGXPXRXGPPPGXXXXSPXSPXXXPPXXLXFPXXXSXXXX 890
+P ++ P PP G P PP G S P PP P
Sbjct: 719 LPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP------- 771
Query: 891 NXPPPPXGG 917
PPPP GG
Sbjct: 772 -PPPPPPGG 779
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +3
Query: 462 TGAGGXGGRLXXAXXPPPPAGXXXSTXSGAPPP 560
T AGG PPPP G T PPP
Sbjct: 698 TSAGGSSALPPITGGPPPPPGLPPITGGPPPPP 730
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = -1
Query: 869 GGKXXXGXGXXXGGXXXXXXXSGGGAXPXXXPXXXXXLXGGGXXGXXXGNAG 714
GG G G GG SGGG L GGG G G G
Sbjct: 59 GGGGGGGFGGGNGGFGGGGGGSGGGGGGNNIGSLVGSLIGGGGGGGNYGGGG 110
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/69 (28%), Positives = 23/69 (33%)
Frame = +3
Query: 711 IPGVSPXXPXXAPPXKXXXXXGXPXRXGPPPGXXXXSPXSPXXXPPXXLXFPXXXSXXXX 890
+P ++ P PP G P PP G S P PP P
Sbjct: 302 LPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP------- 354
Query: 891 NXPPPPXGG 917
PPPP GG
Sbjct: 355 -PPPPPPGG 362
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +3
Query: 462 TGAGGXGGRLXXAXXPPPPAGXXXSTXSGAPPP 560
T AGG PPPP G T PPP
Sbjct: 281 TSAGGSSALPPITGGPPPPPGLPPITGGPPPPP 313
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Frame = +3
Query: 468 AGGXGGRLXXAXXPPPPA---GXXXSTXSGAPPPKXXVXXXP 584
AGG GG PPPPA + GAPPP P
Sbjct: 22 AGGGGGGCGCGAPPPPPACAPPPAPACGGGAPPPPAYAAPAP 63
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/64 (26%), Positives = 19/64 (29%), Gaps = 2/64 (3%)
Frame = +1
Query: 724 PXXXPXXPPPXRXXXXXGXXXGXAPPPEXXXXXXXPPXXXPXPXXXFPP--XXRXXXXTP 897
P P PP + G PP PP P P P + P
Sbjct: 434 PPPPPSAPPTIKFPISTGTSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPP 493
Query: 898 PLPP 909
PLPP
Sbjct: 494 PLPP 497
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/64 (26%), Positives = 19/64 (29%), Gaps = 2/64 (3%)
Frame = +1
Query: 724 PXXXPXXPPPXRXXXXXGXXXGXAPPPEXXXXXXXPPXXXPXPXXXFPP--XXRXXXXTP 897
P P PP + G PP PP P P P + P
Sbjct: 441 PPPPPSAPPTIKFPISTGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPP 500
Query: 898 PLPP 909
PLPP
Sbjct: 501 PLPP 504
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.7 bits (61), Expect = 6.3
Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 2/59 (3%)
Frame = +1
Query: 736 PXXPPPXRXXXXXGXXXGXAPPPEXXXXXXXPPXXXP--XPXXXFPPXXRXXXXTPPLP 906
P PPP R G PPP PP P P P R TPP P
Sbjct: 122 PPPPPPPRKSRAGG--SSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSP 178
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = +1
Query: 736 PXXPPPXRXXXXXGXXXGXAPPPEXXXXXXXPPXXXPXPXXXFPPXXRXXXXTPPLP 906
P PPP PPP P P P F P PPLP
Sbjct: 1341 PPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPPPLP 1397
>AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical
protein Y55F3AR.2 protein.
Length = 254
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = +3
Query: 438 GAXPXPXXTGAGGXGGRLXXAXXPPPPAGXXXSTXSG 548
G P P AGG G A PPPPAG SG
Sbjct: 214 GGGPAPGAPRAGGSGA--GGAPRPPPPAGPRAFGGSG 248
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 523 PAGGGGXXAXXSRPPXPPAPVXXGXG 446
P+GGGG + PP PP+P G G
Sbjct: 20 PSGGGGGCGC-APPPPPPSPCGCGGG 44
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,004,518
Number of Sequences: 27780
Number of extensions: 236777
Number of successful extensions: 1223
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 982
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2391724104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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