Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_I01
         (864 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0583 - 25838016-25838684                                         33   0.39 
08_02_0347 + 16065800-16065974,16066178-16066306,16067407-160674...    31   1.6  
03_06_0008 - 30978448-30978593,30978673-30978733,30978822-309790...    31   1.6  
03_06_0006 + 30963331-30963457,30963751-30964715,30965166-309653...    31   1.6  
12_02_0082 - 13372997-13373863,13373928-13374386                       30   2.7  
07_01_1201 - 11419851-11419913,11420090-11420311                       29   6.3  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.4  
06_01_1042 + 8187536-8187616,8187713-8188315                           28   8.4  
01_02_0036 + 10468636-10468938,10469014-10469109,10469247-104694...    28   8.4  

>03_05_0583 - 25838016-25838684
          Length = 222

 Score = 32.7 bits (71), Expect = 0.39
 Identities = 17/52 (32%), Positives = 22/52 (42%)
 Frame = +1

Query: 628 PGKLPRALSCSDPCRLPDTCPPFSLREAWRFLXSSRCRYLSXGVGRSLQXXA 783
           PG+L     CS+PCR   TC P    E ++ L      Y   G G +    A
Sbjct: 161 PGELRAKAGCSNPCRGNSTCGPTKDTEFFKKLCPETVTYARDGQGTTFTCPA 212


>08_02_0347 +
           16065800-16065974,16066178-16066306,16067407-16067432,
           16067474-16067557
          Length = 137

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 17/47 (36%), Positives = 27/47 (57%)
 Frame = -2

Query: 770 SERPTPXLRYLQRELMRKRHASRREKGGQVSGKRQGSEQESARGSXP 630
           S R  P +RY +R L+R++ +  R +G    GKR+  +  S RG+ P
Sbjct: 9   SSRLLPLVRYGRRPLVRQKWSFERGEG----GKREHQQNGSGRGARP 51


>03_06_0008 -
           30978448-30978593,30978673-30978733,30978822-30979007,
           30979458-30980422,30980716-30980842
          Length = 494

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -2

Query: 746 RYLQRELMRKRHASRREKGGQVSGKRQGSEQESARGSXP 630
           R  QR   RKR A+ +++GG  + +  G E   A+G  P
Sbjct: 19  RNQQRRQRRKRAAAGKKQGGSPASENNGEEHADAQGCLP 57


>03_06_0006 +
           30963331-30963457,30963751-30964715,30965166-30965351,
           30965440-30965500,30965580-30965623
          Length = 460

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -2

Query: 746 RYLQRELMRKRHASRREKGGQVSGKRQGSEQESARGSXP 630
           R  QR   RKR A+ +++GG  + +  G E   A+G  P
Sbjct: 19  RNQQRRQRRKRAAAGKKQGGSPASENNGEEHADAQGCLP 57


>12_02_0082 - 13372997-13373863,13373928-13374386
          Length = 441

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = +3

Query: 642 SCALLFRPLPLTGYLSAFLPS 704
           SCALLF P+PL G     LPS
Sbjct: 164 SCALLFSPMPLDGPTLGLLPS 184


>07_01_1201 - 11419851-11419913,11420090-11420311
          Length = 94

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
 Frame = +1

Query: 538 LRPPDEHHKNRRSSQRWRN--PTGL*RYQAFPPGKLPRALSCSDPCRLPDTCP 690
           L PP          Q+WR+  PTG   + +FP G LP A     P   PD  P
Sbjct: 13  LLPPPPPLPALPQGQQWRSTGPTGKLCFCSFPAGALPPAAGAGQPA--PDRQP 63


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 298 NESAN---ARGEAVCVLGALPLPRSLTRCAR 381
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>06_01_1042 + 8187536-8187616,8187713-8188315
          Length = 227

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = -2

Query: 758 TPXLRYLQRELMRKRHASRREKGGQVSGKRQGSEQESARGSXPGGNAWY 612
           TP     +R  +  R A   E+G +  G R+   +   RGS   G +W+
Sbjct: 60  TPARTERERAPLAARPAGEEEEGRRAGGWRRRRRRRQRRGSRSLGGSWW 108


>01_02_0036 +
           10468636-10468938,10469014-10469109,10469247-10469453,
           10470762-10471097,10471469-10471582,10471634-10471639
          Length = 353

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -2

Query: 719 KRHASRREKGGQVSGKRQGSEQESARGSXPGGNAW 615
           K H  RR +GG      +  E+E+ R S  GG  W
Sbjct: 9   KHHHHRRRRGGGGEDGGEEEEEETGRLSLRGGGFW 43


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,101,412
Number of Sequences: 37544
Number of extensions: 472564
Number of successful extensions: 1594
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1593
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)