Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_I01
(864 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 28 0.13
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 26 0.52
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 23 2.7
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 23 2.7
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 22 6.3
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 22 6.3
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 22 6.3
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 22 6.3
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 22 8.4
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 22 8.4
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 22 8.4
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 22 8.4
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 27.9 bits (59), Expect = 0.13
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +1
Query: 586 WRNPTGL*RYQAFPPGKLPRALSCSDPCRLPDTCPPF 696
+ NP RYQ P GK+ R L RL D P F
Sbjct: 91 YENPDEEKRYQEHPNGKILRELQTDYDRRLHDNSPSF 127
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 25.8 bits (54), Expect = 0.52
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -1
Query: 474 SHVLSCVIPLILWITVLPPLSELIPLAA 391
S +LS V+ L+L +LPP S ++PL A
Sbjct: 270 SILLSLVVFLLLVSKILPPTSLVLPLIA 297
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 23.4 bits (48), Expect = 2.7
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -1
Query: 495 GLLLAFCSHVL-SCVIPLILWITVLPPLSELIPL 397
G ++ CS +L S + +L ++PP S IPL
Sbjct: 278 GEKVSLCSSILLSLTVFFLLLAEIIPPTSLAIPL 311
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 23.4 bits (48), Expect = 2.7
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -1
Query: 291 EKTSHTSTLNLKHKMNAIVVV 229
E T TLNLKH A++V+
Sbjct: 56 EDAEDTQTLNLKHLRAAVLVL 76
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 22.2 bits (45), Expect = 6.3
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 1 TVFXTXXYREFLKI*IVGTAAAD 69
T+ +R+F+K I GT+ AD
Sbjct: 88 TIIDAPGHRDFIKNMITGTSQAD 110
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 22.2 bits (45), Expect = 6.3
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 1 TVFXTXXYREFLKI*IVGTAAAD 69
T+ +R+F+K I GT+ AD
Sbjct: 15 TIIDAPGHRDFIKNMITGTSQAD 37
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 22.2 bits (45), Expect = 6.3
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 1 TVFXTXXYREFLKI*IVGTAAAD 69
T+ +R+F+K I GT+ AD
Sbjct: 31 TIIDAPGHRDFIKNMITGTSQAD 53
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 22.2 bits (45), Expect = 6.3
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 1 TVFXTXXYREFLKI*IVGTAAAD 69
T+ +R+F+K I GT+ AD
Sbjct: 88 TIIDAPGHRDFIKNMITGTSQAD 110
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.8 bits (44), Expect = 8.4
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -1
Query: 474 SHVLSCVIPLILWITVLPPLSELIPL 397
S +LS + +L ++PP S ++PL
Sbjct: 277 SILLSLTVFFLLLAEIIPPTSLVVPL 302
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 21.8 bits (44), Expect = 8.4
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -3
Query: 706 PEGRKADRYPVSGRGRNRRAHEG 638
P G Y +SG G+ A+EG
Sbjct: 28 PLGAIKGYYKISGNGKQYEAYEG 50
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.8 bits (44), Expect = 8.4
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -1
Query: 291 EKTSHTSTLNLKHKM 247
++ H+STL++ HKM
Sbjct: 238 DENRHSSTLDIDHKM 252
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 21.8 bits (44), Expect = 8.4
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -3
Query: 706 PEGRKADRYPVSGRGRNRRAHEG 638
P G Y +SG G+ A+EG
Sbjct: 28 PLGAIKGYYKISGNGKQYEAYEG 50
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,137
Number of Sequences: 438
Number of extensions: 5410
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27916710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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