Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_H22
(892 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 39 0.004
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 36 0.039
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 36 0.039
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 36 0.039
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.051
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.051
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.051
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 35 0.068
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 35 0.068
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 35 0.090
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 35 0.090
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 35 0.090
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 35 0.090
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 33 0.27
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 33 0.27
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 33 0.27
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 33 0.27
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 33 0.27
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 33 0.36
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 33 0.36
U58764-3|AAB00725.1| 122|Caenorhabditis elegans Hypothetical pr... 32 0.63
U41558-4|AAK39246.1| 117|Caenorhabditis elegans Ribosomal prote... 32 0.63
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 31 0.84
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 31 0.84
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 31 0.84
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.1
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 31 1.1
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 31 1.1
Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 31 1.5
AF067219-1|AAC17036.1| 74|Caenorhabditis elegans Hypothetical ... 31 1.5
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 1.5
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 30 1.9
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 30 1.9
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 30 1.9
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 29 3.4
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 29 4.5
AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical ... 29 4.5
AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical ... 29 4.5
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 29 5.9
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 5.9
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 29 5.9
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 29 5.9
Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 28 7.8
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 28 7.8
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 28 7.8
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 28 7.8
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 28 7.8
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 28 7.8
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 23 8.9
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/44 (47%), Positives = 21/44 (47%)
Frame = +3
Query: 492 GXGGXFXXPPPPPPXKKXXPXGXGGGGGGXPPXXGGXXLPPKGG 623
G GG PPPPPP P G GGGGG P LP GG
Sbjct: 23 GGGGCGCAPPPPPPS----PCGCGGGGGLALPQLPPLSLPSLGG 62
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.9 bits (79), Expect = 0.039
Identities = 21/59 (35%), Positives = 22/59 (37%), Gaps = 3/59 (5%)
Frame = +3
Query: 516 PPPPPPXKKXXPXGXGGGGGGXPPXXGGXXLPPKGGXTXXKKFXXXXP---XXXPPPXR 683
PPPPPP K P G G PP G PP+ G P PPP R
Sbjct: 237 PPPPPPPKGSPP--LAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR 293
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 3/34 (8%)
Frame = -1
Query: 310 GGPPPPXXFFFXGGPXPPPXGG---XXXGGXPPP 218
G PPPP G P PPP GG G PPP
Sbjct: 270 GSPPPPPT----GSPPPPPAGGSPPPPRAGSPPP 299
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Frame = +3
Query: 516 PPPPPPXKKXXPXG--XGGGGGGXPPXXGGXXLPP 614
PPPPPP + P G GG PP G PP
Sbjct: 297 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 331
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -1
Query: 310 GGPPPPXXFFFXGGPXPPPXGGXXXGGXPPP 218
G PPPP P PPP G G PPP
Sbjct: 287 GSPPPPRAG--SPPPPPPPRGSPPTGSLPPP 315
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/64 (31%), Positives = 21/64 (32%), Gaps = 7/64 (10%)
Frame = +3
Query: 516 PPPPPPXKKXXPXGXGGG-----GGGXPPXXGGXXLPPKGGXTXXKKFXXXXP--XXXPP 674
PPPPP P G G PP GG PP+ G P PP
Sbjct: 255 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 314
Query: 675 PXRG 686
P G
Sbjct: 315 PQAG 318
Score = 29.1 bits (62), Expect = 4.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 269 PPPPPXGGGXXGGXPPP 219
PPPPP G G PPP
Sbjct: 299 PPPPPRGSPPTGSLPPP 315
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.9 bits (79), Expect = 0.039
Identities = 21/59 (35%), Positives = 22/59 (37%), Gaps = 3/59 (5%)
Frame = +3
Query: 516 PPPPPPXKKXXPXGXGGGGGGXPPXXGGXXLPPKGGXTXXKKFXXXXP---XXXPPPXR 683
PPPPPP K P G G PP G PP+ G P PPP R
Sbjct: 258 PPPPPPPKGSPP--LAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR 314
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 3/34 (8%)
Frame = -1
Query: 310 GGPPPPXXFFFXGGPXPPPXGG---XXXGGXPPP 218
G PPPP G P PPP GG G PPP
Sbjct: 291 GSPPPPPT----GSPPPPPAGGSPPPPRAGSPPP 320
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Frame = +3
Query: 516 PPPPPPXKKXXPXG--XGGGGGGXPPXXGGXXLPP 614
PPPPPP + P G GG PP G PP
Sbjct: 318 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 352
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -1
Query: 310 GGPPPPXXFFFXGGPXPPPXGGXXXGGXPPP 218
G PPPP P PPP G G PPP
Sbjct: 308 GSPPPPRAG--SPPPPPPPRGSPPTGSLPPP 336
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/64 (31%), Positives = 21/64 (32%), Gaps = 7/64 (10%)
Frame = +3
Query: 516 PPPPPPXKKXXPXGXGGG-----GGGXPPXXGGXXLPPKGGXTXXKKFXXXXP--XXXPP 674
PPPPP P G G PP GG PP+ G P PP
Sbjct: 276 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 335
Query: 675 PXRG 686
P G
Sbjct: 336 PQAG 339
Score = 29.1 bits (62), Expect = 4.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 269 PPPPPXGGGXXGGXPPP 219
PPPPP G G PPP
Sbjct: 320 PPPPPRGSPPTGSLPPP 336
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.9 bits (79), Expect = 0.039
Identities = 21/59 (35%), Positives = 22/59 (37%), Gaps = 3/59 (5%)
Frame = +3
Query: 516 PPPPPPXKKXXPXGXGGGGGGXPPXXGGXXLPPKGGXTXXKKFXXXXP---XXXPPPXR 683
PPPPPP K P G G PP G PP+ G P PPP R
Sbjct: 243 PPPPPPPKGSPP--LAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR 299
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 3/34 (8%)
Frame = -1
Query: 310 GGPPPPXXFFFXGGPXPPPXGG---XXXGGXPPP 218
G PPPP G P PPP GG G PPP
Sbjct: 276 GSPPPPPT----GSPPPPPAGGSPPPPRAGSPPP 305
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Frame = +3
Query: 516 PPPPPPXKKXXPXG--XGGGGGGXPPXXGGXXLPP 614
PPPPPP + P G GG PP G PP
Sbjct: 303 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 337
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -1
Query: 310 GGPPPPXXFFFXGGPXPPPXGGXXXGGXPPP 218
G PPPP P PPP G G PPP
Sbjct: 293 GSPPPPRAG--SPPPPPPPRGSPPTGSLPPP 321
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/64 (31%), Positives = 21/64 (32%), Gaps = 7/64 (10%)
Frame = +3
Query: 516 PPPPPPXKKXXPXGXGGG-----GGGXPPXXGGXXLPPKGGXTXXKKFXXXXP--XXXPP 674
PPPPP P G G PP GG PP+ G P PP
Sbjct: 261 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 320
Query: 675 PXRG 686
P G
Sbjct: 321 PQAG 324
Score = 29.1 bits (62), Expect = 4.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 269 PPPPPXGGGXXGGXPPP 219
PPPPP G G PPP
Sbjct: 305 PPPPPRGSPPTGSLPPP 321
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.5 bits (78), Expect = 0.051
Identities = 18/35 (51%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Frame = -1
Query: 310 GGPPPPXXFF-FXGGPXPPPXGG---XXXGGXPPP 218
GGPPPP GGP PPP G GG PPP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPP 745
Score = 34.3 bits (75), Expect = 0.12
Identities = 23/58 (39%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Frame = +3
Query: 516 PPPPPPXKKXXPXGXGGGGGGXPPXXGGXXLPP-KGGXTXXKKFXXXXPXXXPPPXRG 686
PPPPPP P GG PP GG LPP GG P PPP G
Sbjct: 726 PPPPPPPGGLPPI---TGGPPPPPPPGG--LPPISGGPPPPPPPPGGCPPPPPPPPPG 778
Score = 33.9 bits (74), Expect = 0.16
Identities = 18/35 (51%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Frame = -1
Query: 310 GGPPPPXXFFFXGG----PXPPPXGGXXXGGXPPP 218
GGPPPP GG P PPP GG G PPP
Sbjct: 756 GGPPPPPPP--PGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 33.9 bits (74), Expect = 0.16
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -3
Query: 269 PPPPPXGGGXXGGXPPP 219
PPPPP GG GG PPP
Sbjct: 771 PPPPPPPGGFKGGPPPP 787
Score = 31.9 bits (69), Expect = 0.63
Identities = 18/38 (47%), Positives = 18/38 (47%), Gaps = 7/38 (18%)
Frame = -1
Query: 310 GGPPPPXXFF----FXGGPXPPPXGG---XXXGGXPPP 218
GGPPPP GGP PPP G GG PPP
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/54 (37%), Positives = 20/54 (37%)
Frame = +3
Query: 516 PPPPPPXKKXXPXGXGGGGGGXPPXXGGXXLPPKGGXTXXKKFXXXXPXXXPPP 677
PPPPPP P GG PP GG PP K P PPP
Sbjct: 742 PPPPPPPGGLPP--ISGGPPPPPPPPGGCPPPPPPPPPGGFK---GGPPPPPPP 790
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -1
Query: 304 PPPPXXFFFXGGPXPPPXGG 245
PPPP F GGP PPP G
Sbjct: 772 PPPPPPGGFKGGPPPPPPPG 791
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/35 (48%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Frame = -1
Query: 310 GGPPPPXXFF----FXGGPXPPPXGGXXXGGXPPP 218
GGPPPP GGP PPP GG PPP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPP---PPPGGCPPP 771
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/32 (50%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = +3
Query: 222 GGXPPXXXPPXGGGXGPPXKKKXXGG--GGPP 311
GG PP PP GG PP GG GGPP
Sbjct: 756 GGPPPPPPPP--GGCPPPPPPPPPGGFKGGPP 785
Score = 29.9 bits (64), Expect = 2.6
Identities = 27/103 (26%), Positives = 27/103 (26%)
Frame = +3
Query: 519 PPPPPXKKXXPXGXGGGGGGXPPXXGGXXLPPKGGXTXXKKFXXXXPXXXPPPXRGXXXX 698
PPP P GG PP GG PP P PPP G
Sbjct: 686 PPPTKMNLSAPSTSAGGSSALPPITGGPPPPP-----GLPPITGGPP--PPPPPGGLPP- 737
Query: 699 XF*XXXXXXXXXXXXXXXXXXGGPPXGX*KXXGXPPXKXPPXP 827
GGPP G PP PP P
Sbjct: 738 ---ITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 761 GGPPPGXIKKXXXPPPKXPPXPPXF 835
GGPPP PPP PP P F
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGF 780
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.5 bits (78), Expect = 0.051
Identities = 18/35 (51%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Frame = -1
Query: 310 GGPPPPXXFF-FXGGPXPPPXGG---XXXGGXPPP 218
GGPPPP GGP PPP G GG PPP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPP 745
Score = 34.3 bits (75), Expect = 0.12
Identities = 23/58 (39%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Frame = +3
Query: 516 PPPPPPXKKXXPXGXGGGGGGXPPXXGGXXLPP-KGGXTXXKKFXXXXPXXXPPPXRG 686
PPPPPP P GG PP GG LPP GG P PPP G
Sbjct: 726 PPPPPPPGGLPPI---TGGPPPPPPPGG--LPPISGGPPPPPPPPGGCPPPPPPPPPG 778
Score = 33.9 bits (74), Expect = 0.16
Identities = 18/35 (51%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Frame = -1
Query: 310 GGPPPPXXFFFXGG----PXPPPXGGXXXGGXPPP 218
GGPPPP GG P PPP GG G PPP
Sbjct: 756 GGPPPPPPP--PGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 33.9 bits (74), Expect = 0.16
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -3
Query: 269 PPPPPXGGGXXGGXPPP 219
PPPPP GG GG PPP
Sbjct: 771 PPPPPPPGGFKGGPPPP 787
Score = 31.9 bits (69), Expect = 0.63
Identities = 18/38 (47%), Positives = 18/38 (47%), Gaps = 7/38 (18%)
Frame = -1
Query: 310 GGPPPPXXFF----FXGGPXPPPXGG---XXXGGXPPP 218
GGPPPP GGP PPP G GG PPP
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/54 (37%), Positives = 20/54 (37%)
Frame = +3
Query: 516 PPPPPPXKKXXPXGXGGGGGGXPPXXGGXXLPPKGGXTXXKKFXXXXPXXXPPP 677
PPPPPP P GG PP GG PP K P PPP
Sbjct: 742 PPPPPPPGGLPP--ISGGPPPPPPPPGGCPPPPPPPPPGGFK---GGPPPPPPP 790
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -1
Query: 304 PPPPXXFFFXGGPXPPPXGG 245
PPPP F GGP PPP G
Sbjct: 772 PPPPPPGGFKGGPPPPPPPG 791
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/35 (48%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Frame = -1
Query: 310 GGPPPPXXFF----FXGGPXPPPXGGXXXGGXPPP 218
GGPPPP GGP PPP GG PPP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPP---PPPGGCPPP 771
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/32 (50%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = +3
Query: 222 GGXPPXXXPPXGGGXGPPXKKKXXGG--GGPP 311
GG PP PP GG PP GG GGPP
Sbjct: 756 GGPPPPPPPP--GGCPPPPPPPPPGGFKGGPP 785
Score = 29.9 bits (64), Expect = 2.6
Identities = 27/103 (26%), Positives = 27/103 (26%)
Frame = +3
Query: 519 PPPPPXKKXXPXGXGGGGGGXPPXXGGXXLPPKGGXTXXKKFXXXXPXXXPPPXRGXXXX 698
PPP P GG PP GG PP P PPP G
Sbjct: 686 PPPTKMNLSAPSTSAGGSSALPPITGGPPPPP-----GLPPITGGPP--PPPPPGGLPP- 737
Query: 699 XF*XXXXXXXXXXXXXXXXXXGGPPXGX*KXXGXPPXKXPPXP 827
GGPP G PP PP P
Sbjct: 738 ---ITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 761 GGPPPGXIKKXXXPPPKXPPXPPXF 835
GGPPP PPP PP P F
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGF 780
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.5 bits (78), Expect = 0.051
Identities = 18/35 (51%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Frame = -1
Query: 310 GGPPPPXXFF-FXGGPXPPPXGG---XXXGGXPPP 218
GGPPPP GGP PPP G GG PPP
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPP 328
Score = 34.3 bits (75), Expect = 0.12
Identities = 23/58 (39%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Frame = +3
Query: 516 PPPPPPXKKXXPXGXGGGGGGXPPXXGGXXLPP-KGGXTXXKKFXXXXPXXXPPPXRG 686
PPPPPP P GG PP GG LPP GG P PPP G
Sbjct: 309 PPPPPPPGGLPPI---TGGPPPPPPPGG--LPPISGGPPPPPPPPGGCPPPPPPPPPG 361
Score = 33.9 bits (74), Expect = 0.16
Identities = 18/35 (51%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Frame = -1
Query: 310 GGPPPPXXFFFXGG----PXPPPXGGXXXGGXPPP 218
GGPPPP GG P PPP GG G PPP
Sbjct: 339 GGPPPPPPP--PGGCPPPPPPPPPGGFKGGPPPPP 371
Score = 33.9 bits (74), Expect = 0.16
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -3
Query: 269 PPPPPXGGGXXGGXPPP 219
PPPPP GG GG PPP
Sbjct: 354 PPPPPPPGGFKGGPPPP 370
Score = 31.9 bits (69), Expect = 0.63
Identities = 18/38 (47%), Positives = 18/38 (47%), Gaps = 7/38 (18%)
Frame = -1
Query: 310 GGPPPPXXFF----FXGGPXPPPXGG---XXXGGXPPP 218
GGPPPP GGP PPP G GG PPP
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 344
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/54 (37%), Positives = 20/54 (37%)
Frame = +3
Query: 516 PPPPPPXKKXXPXGXGGGGGGXPPXXGGXXLPPKGGXTXXKKFXXXXPXXXPPP 677
PPPPPP P GG PP GG PP K P PPP
Sbjct: 325 PPPPPPPGGLPP--ISGGPPPPPPPPGGCPPPPPPPPPGGFK---GGPPPPPPP 373
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -1
Query: 304 PPPPXXFFFXGGPXPPPXGG 245
PPPP F GGP PPP G
Sbjct: 355 PPPPPPGGFKGGPPPPPPPG 374
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/35 (48%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Frame = -1
Query: 310 GGPPPPXXFF----FXGGPXPPPXGGXXXGGXPPP 218
GGPPPP GGP PPP GG PPP
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPP---PPPGGCPPP 354
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/32 (50%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = +3
Query: 222 GGXPPXXXPPXGGGXGPPXKKKXXGG--GGPP 311
GG PP PP GG PP GG GGPP
Sbjct: 339 GGPPPPPPPP--GGCPPPPPPPPPGGFKGGPP 368
Score = 29.9 bits (64), Expect = 2.6
Identities = 27/103 (26%), Positives = 27/103 (26%)
Frame = +3
Query: 519 PPPPPXKKXXPXGXGGGGGGXPPXXGGXXLPPKGGXTXXKKFXXXXPXXXPPPXRGXXXX 698
PPP P GG PP GG PP P PPP G
Sbjct: 269 PPPTKMNLSAPSTSAGGSSALPPITGGPPPPP-----GLPPITGGPP--PPPPPGGLPP- 320
Query: 699 XF*XXXXXXXXXXXXXXXXXXGGPPXGX*KXXGXPPXKXPPXP 827
GGPP G PP PP P
Sbjct: 321 ---ITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 360
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 761 GGPPPGXIKKXXXPPPKXPPXPPXF 835
GGPPP PPP PP P F
Sbjct: 339 GGPPPPPPPPGGCPPPPPPPPPGGF 363
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 35.1 bits (77), Expect = 0.068
Identities = 20/59 (33%), Positives = 22/59 (37%)
Frame = +3
Query: 501 GXFXXPPPPPPXKKXXPXGXGGGGGGXPPXXGGXXLPPKGGXTXXKKFXXXXPXXXPPP 677
G + PPPPPP + P G G PP G P GG P PPP
Sbjct: 294 GMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGP--PGMGGMPPPPPPGMRYPGGMPPP 350
Score = 33.9 bits (74), Expect = 0.16
Identities = 16/32 (50%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
Frame = -1
Query: 304 PPPPXXFF---FXGGPXPPPXGGXXXGGXPPP 218
PPPP F G P PPP G GG PPP
Sbjct: 319 PPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPP 350
Score = 33.5 bits (73), Expect = 0.21
Identities = 20/62 (32%), Positives = 23/62 (37%)
Frame = +3
Query: 492 GXGGXFXXPPPPPPXKKXXPXGXGGGGGGXPPXXGGXXLPPKGGXTXXKKFXXXXPXXXP 671
G G PPPPPP + P G GG PP G P ++ P P
Sbjct: 309 GPPGMPGMPPPPPPSRFGPP----GMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYP 364
Query: 672 PP 677
PP
Sbjct: 365 PP 366
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -3
Query: 269 PPPPPXGGGXXGGXPPP 219
PPPPP G GG PPP
Sbjct: 334 PPPPPPGMRYPGGMPPP 350
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 35.1 bits (77), Expect = 0.068
Identities = 20/59 (33%), Positives = 22/59 (37%)
Frame = +3
Query: 501 GXFXXPPPPPPXKKXXPXGXGGGGGGXPPXXGGXXLPPKGGXTXXKKFXXXXPXXXPPP 677
G + PPPPPP + P G G PP G P GG P PPP
Sbjct: 304 GMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGP--PGMGGMPPPPPPGMRYPGGMPPP 360
Score = 33.9 bits (74), Expect = 0.16
Identities = 16/32 (50%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
Frame = -1
Query: 304 PPPPXXFF---FXGGPXPPPXGGXXXGGXPPP 218
PPPP F G P PPP G GG PPP
Sbjct: 329 PPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPP 360
Score = 33.5 bits (73), Expect = 0.21
Identities = 20/62 (32%), Positives = 23/62 (37%)
Frame = +3
Query: 492 GXGGXFXXPPPPPPXKKXXPXGXGGGGGGXPPXXGGXXLPPKGGXTXXKKFXXXXPXXXP 671
G G PPPPPP + P G GG PP G P ++ P P
Sbjct: 319 GPPGMPGMPPPPPPSRFGPP----GMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYP 374
Query: 672 PP 677
PP
Sbjct: 375 PP 376
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -3
Query: 269 PPPPPXGGGXXGGXPPP 219
PPPPP G GG PPP
Sbjct: 344 PPPPPPGMRYPGGMPPP 360
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 34.7 bits (76), Expect = 0.090
Identities = 18/44 (40%), Positives = 18/44 (40%)
Frame = +3
Query: 492 GXGGXFXXPPPPPPXKKXXPXGXGGGGGGXPPXXGGXXLPPKGG 623
G GG PPPPP G GG GGG GG GG
Sbjct: 47 GCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGG 90
Score = 33.5 bits (73), Expect = 0.21
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = +3
Query: 492 GXGGXFXXPPPPPPXKKXXPXGXGGGGGGXPPXXGG 599
G GG PPPPP G GG GGG GG
Sbjct: 104 GCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGG 139
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = +3
Query: 492 GXGGXFXXPPPPPPXKKXXPXGXGGGGGGXPPXXGG 599
G GG PPPP G GGGGGG GG
Sbjct: 44 GGGGCGGGCAPPPPPPACG-GGCGGGGGGCGGGGGG 78
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = +3
Query: 492 GXGGXFXXPPPPPPXKKXXPXGXGGGGGGXPPXXGG 599
G GG PPPP G GGGGGG GG
Sbjct: 101 GGGGCGGGCAPPPPPPACG-GGCGGGGGGCGGGCGG 135
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 34.7 bits (76), Expect = 0.090
Identities = 41/168 (24%), Positives = 47/168 (27%), Gaps = 13/168 (7%)
Frame = +3
Query: 222 GGXPPXXXPPXGGGXGPPXKKKXXGGGGPPXKKXXKKKFFXXKXGXXFFXXPPXXXXKKX 401
GG PP P GG PP +++ G PP + F PP +
Sbjct: 294 GGPPPSGPPSEYGGYAPPQQQQQQFGAPPPQGAPQQG-----------FGAPPQGPPQGG 342
Query: 402 XXXKXXXXXXXXXXXXXXXXXXXXXXXXXXGXGGXFXXPP---PP-----PPXKKXXPXG 557
G F PP PP PP P G
Sbjct: 343 PPQGSFGAPPPQQFHAPSPQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQG 402
Query: 558 XGGGGGGXPPXXGGXXL-----PPKGGXTXXKKFXXXXPXXXPPPXRG 686
GG GG PP GG PP+GG P PP G
Sbjct: 403 PGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTG 450
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -1
Query: 310 GGPPPPXXFFFXGGPXPPPXGGXXXGGXPPP 218
GGPPPP G PPP G PPP
Sbjct: 365 GGPPPPVSSA-PGNFAPPPQSGPPGAFAPPP 394
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 34.7 bits (76), Expect = 0.090
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -1
Query: 304 PPPPXXFFFXGGPXPPPXGGXXXGGXPPP 218
PPPP G P PPP GG PPP
Sbjct: 564 PPPPLPQNLSGAPPPPPPPPPMLGGPPPP 592
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 34.7 bits (76), Expect = 0.090
Identities = 18/42 (42%), Positives = 20/42 (47%)
Frame = +3
Query: 492 GXGGXFXXPPPPPPXKKXXPXGXGGGGGGXPPXXGGXXLPPK 617
G GG PPPPPP GGG GG P GG + P+
Sbjct: 23 GGGGGCCAPPPPPP--------CGGGCGGGAPAAGGYAVAPQ 56
Score = 31.5 bits (68), Expect = 0.84
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -3
Query: 269 PPPPPXGGGXXGGXP 225
PPPPP GGG GG P
Sbjct: 32 PPPPPCGGGCGGGAP 46
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -3
Query: 269 PPPPPXGGGXXGGXPPPA 216
PPPPP GG GG P A
Sbjct: 31 PPPPPPCGGGCGGGAPAA 48
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 33.5 bits (73), Expect = 0.21
Identities = 16/31 (51%), Positives = 16/31 (51%)
Frame = -1
Query: 310 GGPPPPXXFFFXGGPXPPPXGGXXXGGXPPP 218
GG PPP F G P PPP GG PPP
Sbjct: 81 GGIPPPPPMFAGGIPPPPP----MMGGIPPP 107
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/62 (32%), Positives = 20/62 (32%), Gaps = 2/62 (3%)
Frame = +3
Query: 507 FXXPPPPPPXKKXXPXGXGGGGGGXPPXXGGXXLPP--KGGXTXXKKFXXXXPXXXPPPX 680
F PPP P P G GG P GG PP GG P PP
Sbjct: 63 FFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSG 122
Query: 681 RG 686
G
Sbjct: 123 LG 124
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 310 GGPPPPXXFFFXGGPXPPPXGGXXXGGXPP 221
GG PPP F P PPP G PP
Sbjct: 102 GGIPPPPP-MFGAPPPPPPPSGLGVAPQPP 130
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +3
Query: 522 PPPPXKKXXPXGXGGGGGGXPPXXGGXXLPPKGG 623
PPPP + P GGGGG PP P G
Sbjct: 790 PPPPGMRPPPGAPGGGGGMYPPLIPTRVPTPSNG 823
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 516 PPPPPPXKKXXPXGXGGGGGGXPP 587
P PPP P G GGGGG P
Sbjct: 787 PGAPPPPGMRPPPGAPGGGGGMYP 810
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 33.1 bits (72), Expect = 0.27
Identities = 31/114 (27%), Positives = 31/114 (27%), Gaps = 2/114 (1%)
Frame = +3
Query: 492 GXGGXFXXPPPPPPXKKXXPXGXGGG--GGGXPPXXGGXXLPPKGGXTXXKKFXXXXPXX 665
G G F PP P G G GG P PP GG T P
Sbjct: 165 GPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPSG 224
Query: 666 XPPPXRGXXXXXF*XXXXXXXXXXXXXXXXXXGGPPXGX*KXXGXPPXKXPPXP 827
PP G GGPP G G PP PP P
Sbjct: 225 GPP---GPFNPSGAPPSGGPPGPFDPSGAPPSGGPP-GPFNPSGAPPSGGPPGP 274
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -1
Query: 310 GGPPPPXXFFFXGGPXPPPXGGXXXGGXPP 221
G PPPP + GGP PP GG PP
Sbjct: 679 GPPPPPQGQQYYGGPPPPGQPYGPPGGYPP 708
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1
Query: 271 GPXPPPXGGXXXGGXPPP 218
GP PPP G GG PPP
Sbjct: 679 GPPPPPQGQQYYGGPPPP 696
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -1
Query: 310 GGPPPPXXFFFXGGPXPPPXGGXXXGGXPP 221
G PPPP + GGP PP GG PP
Sbjct: 679 GPPPPPQGQQYYGGPPPPGQPYGPPGGYPP 708
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1
Query: 271 GPXPPPXGGXXXGGXPPP 218
GP PPP G GG PPP
Sbjct: 679 GPPPPPQGQQYYGGPPPP 696
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +3
Query: 522 PPPPXKKXXPXGXGGGGGGXPPXXGGXXLPPKGG 623
PPPP + P GGGGG PP P G
Sbjct: 790 PPPPGMRPPPGAPGGGGGMYPPLIPTRVPTPSNG 823
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 516 PPPPPPXKKXXPXGXGGGGGGXPP 587
P PPP P G GGGGG P
Sbjct: 787 PGAPPPPGMRPPPGAPGGGGGMYP 810
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 32.7 bits (71), Expect = 0.36
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 522 PPPPXKKXXPXGXGGGGGGXPP 587
PPPP + P GGGGG PP
Sbjct: 790 PPPPGMRPPPGAPGGGGGMYPP 811
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +3
Query: 222 GGXPPXXXPPXGGGXGPPXKKKXXGGGGPP 311
G PP P GGG PP G GGPP
Sbjct: 794 GMRPPPGAPGGGGGMYPPLIPTRPGPGGPP 823
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 516 PPPPPPXKKXXPXGXGGGGGGXPP 587
P PPP P G GGGGG P
Sbjct: 787 PGAPPPPGMRPPPGAPGGGGGMYP 810
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +1
Query: 544 PXPXGXGGGGGVXPPXXGXXXSPXKGGXP 630
P P GGGGG+ PP P GG P
Sbjct: 797 PPPGAPGGGGGMYPPL--IPTRPGPGGPP 823
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 32.7 bits (71), Expect = 0.36
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 522 PPPPXKKXXPXGXGGGGGGXPP 587
PPPP + P GGGGG PP
Sbjct: 790 PPPPGMRPPPGAPGGGGGMYPP 811
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +3
Query: 222 GGXPPXXXPPXGGGXGPPXKKKXXGGGGPP 311
G PP P GGG PP G GGPP
Sbjct: 794 GMRPPPGAPGGGGGMYPPLIPTRPGPGGPP 823
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 516 PPPPPPXKKXXPXGXGGGGGGXPP 587
P PPP P G GGGGG P
Sbjct: 787 PGAPPPPGMRPPPGAPGGGGGMYP 810
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +1
Query: 544 PXPXGXGGGGGVXPPXXGXXXSPXKGGXP 630
P P GGGGG+ PP P GG P
Sbjct: 797 PPPGAPGGGGGMYPPL--IPTRPGPGGPP 823
>U58764-3|AAB00725.1| 122|Caenorhabditis elegans Hypothetical
protein M03E7.2 protein.
Length = 122
Score = 31.9 bits (69), Expect = 0.63
Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 5/49 (10%)
Frame = +3
Query: 492 GXGGXFXXPPPPPPXKKXXPXGXGGGGGGXP-----PXXGGXXLPPKGG 623
G G + PPP P P G GG GG P P G + P GG
Sbjct: 48 GMNGMYGGMPPPMPPPGMSPYGMGGMGGMSPYGMMGPMGGMGGMSPYGG 96
>U41558-4|AAK39246.1| 117|Caenorhabditis elegans Ribosomal protein,
small subunitprotein 25 protein.
Length = 117
Score = 31.9 bits (69), Expect = 0.63
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = +3
Query: 231 PPXXXPPXGGGXGPPXKKKXXGGGGPPXKKXXKK 332
PP P GG PP KKK GGG KK K
Sbjct: 2 PPKKDPK--GGKAPPSKKKEGSGGGKAKKKKWSK 33
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 31.5 bits (68), Expect = 0.84
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -3
Query: 269 PPPPPXGGGXXGGXPPP 219
PPPPP GGG PPP
Sbjct: 42 PPPPPCGGGYEAPPPPP 58
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 31.5 bits (68), Expect = 0.84
Identities = 19/43 (44%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +3
Query: 501 GXFXXPPPPPPXKKXX--PXGXGGGGGGXPPXXGGXXLPPKGG 623
G F P PPP P G GG GG PP GG PP G
Sbjct: 146 GMFNVPTGPPPLMGGGGDPRGPPGGMGG-PPGHGGMGGPPGHG 187
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/48 (41%), Positives = 20/48 (41%), Gaps = 5/48 (10%)
Frame = +3
Query: 492 GXGGXFXXPP-----PPPPXKKXXPXGXGGGGGGXPPXXGGXXLPPKG 620
G GG PP PP P G GG GG PP GG PP G
Sbjct: 159 GGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGG--PPGHGGMGGPPPG 204
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 31.5 bits (68), Expect = 0.84
Identities = 19/43 (44%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +3
Query: 501 GXFXXPPPPPPXKKXX--PXGXGGGGGGXPPXXGGXXLPPKGG 623
G F P PPP P G GG GG PP GG PP G
Sbjct: 426 GMFNVPTGPPPLMGGGGDPRGPPGGMGG-PPGHGGMGGPPGHG 467
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/48 (41%), Positives = 20/48 (41%), Gaps = 5/48 (10%)
Frame = +3
Query: 492 GXGGXFXXPP-----PPPPXKKXXPXGXGGGGGGXPPXXGGXXLPPKG 620
G GG PP PP P G GG GG PP GG PP G
Sbjct: 439 GGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGG--PPGHGGMGGPPPG 484
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -3
Query: 269 PPPPPXGGGXXGGXPPP 219
PPPPP G GG PPP
Sbjct: 538 PPPPPPVGMANGGPPPP 554
Score = 27.5 bits (58), Expect(2) = 1.0
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1
Query: 268 PXPPPXGGXXXGGXPPP 218
P PPP G GG PPP
Sbjct: 538 PPPPPPVGMANGGPPPP 554
Score = 22.2 bits (45), Expect(2) = 1.0
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = -1
Query: 304 PPPPXXFFFXGGPXPPP 254
PPPP P PPP
Sbjct: 489 PPPPMPSINGHAPNPPP 505
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = +3
Query: 492 GXGGXFXXPPPPPPXKKXXPXGXGGGGGGXPPXXGGXXLPPKGG 623
G GG PPP P G GG GGG GG GG
Sbjct: 65 GCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGG 108
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +3
Query: 516 PPPPPPXKKXXPXGXGGGGGGXPPXXGGXXLPPKGG 623
PPPPPP P GGG GG GG
Sbjct: 305 PPPPPPPPAPAPVSSGGGYSEQSSGGGGGSSYSGGG 340
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +3
Query: 549 PXGXGGGGGGXPPXXGGXXLPPKGG 623
P G GG GGG GG + P GG
Sbjct: 185 PSGGGGCGGGGSSGGGGYAVAPSGG 209
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 516 PPPPPPXKKXXPXGXGGGGGGXPPXXGG 599
PPPPPP P GGG GG
Sbjct: 303 PPPPPPPPPPAPAPVSSGGGYSEQSSGG 330
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +3
Query: 492 GXGGXFXXPPPPPPXKKXXPXGXGGGGGGXPPXXGGXXLPP 614
G GG PPP P G GG GGG GG PP
Sbjct: 41 GCGGGGGCAPPPAPCGGGCGGGGGGCGGG-----GGCAPPP 76
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = +3
Query: 492 GXGGXFXXPPPPPPXKKXXPXGXGGGGGGXPPXXGGXXLPPKGG 623
G GG PPP P G GG GGG GG GG
Sbjct: 65 GCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGG 108
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +3
Query: 516 PPPPPPXKKXXPXGXGGGGGGXPPXXGGXXLPPKGG 623
PPPPPP P GGG GG GG
Sbjct: 305 PPPPPPPPAPAPVSSGGGYSEQSSGGGGGSSYSGGG 340
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +3
Query: 549 PXGXGGGGGGXPPXXGGXXLPPKGG 623
P G GG GGG GG + P GG
Sbjct: 185 PSGGGGCGGGGSSGGGGYAVAPSGG 209
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 516 PPPPPPXKKXXPXGXGGGGGGXPPXXGG 599
PPPPPP P GGG GG
Sbjct: 303 PPPPPPPPPPAPAPVSSGGGYSEQSSGG 330
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +3
Query: 492 GXGGXFXXPPPPPPXKKXXPXGXGGGGGGXPPXXGGXXLPP 614
G GG PPP P G GG GGG GG PP
Sbjct: 41 GCGGGGGCAPPPAPCGGGCGGGGGGCGGG-----GGCAPPP 76
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = +3
Query: 492 GXGGXFXXPPPPPPXKKXXPXGXGGGGGG 578
G GG PPPPP G GGGGGG
Sbjct: 22 GGGGGCGCAPPPPP----PACGCGGGGGG 46
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = +3
Query: 492 GXGGXFXXPPPPPPXKKXXPXGXGGGGGGXPP 587
G GG PPPPPP G GGG PP
Sbjct: 23 GGGGCGCAPPPPPPA--CGCGGGGGGYAAPPP 52
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +3
Query: 492 GXGGXFXXPPPPPPXKKXXPXGXGGGGGGXPP 587
G GG PPPPP P GGG PP
Sbjct: 25 GGGGCGCGAPPPPPACAPPPAPACGGGAPPPP 56
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +3
Query: 492 GXGGXFXXPPPPPPXKKXXPXGXGGGGGGXPPXXGGXXLPPKG 620
G GG PPPP P GGG PP P G
Sbjct: 24 GGGGGCGCGAPPPPPACAPPPAPACGGGAPPPPAYAAPAPSYG 66
>Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical
protein T16G1.1 protein.
Length = 695
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +3
Query: 516 PPPPPPXKKXXPXGXGGGGGG 578
PPPPPP + G GGGG
Sbjct: 535 PPPPPPPRSSGANGNRNGGGG 555
>AF067219-1|AAC17036.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.15 protein.
Length = 74
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = +1
Query: 556 GXGGGGGVXPPXXGXXXSPXKGGXPXKKNFXAXXPXXXPXPXGGA 690
G GG GG PP +P +G P P P GGA
Sbjct: 24 GAGGAGGCCPPAQPGCGNPCQGAGPQYAAAPPPPPQYAAAPQGGA 68
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = -1
Query: 310 GGPPPPXXFF--FXGGPXPPPXGGXXXGGXPP 221
GG PPP + GGP PPP GG G PP
Sbjct: 1557 GGLPPPHGGMNGWRGGP-PPPRGGSHCQGPPP 1587
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -1
Query: 310 GGPPPPXXFFFXGGPXPPPXGGXXXGGXPPP 218
GGPPPP GP P G G PPP
Sbjct: 1571 GGPPPPRGGSHCQGPPPLMGGPPPRLGMPPP 1601
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = +3
Query: 519 PPPPPXKKXXPXGXGGGGGGXPPXXGGXXLPPKGGXTXXKKFXXXXPXXXPPP 677
PP PP + P G G PP G LP +K P PP
Sbjct: 115 PPGPPGRDGRPGAPGRPGNPGPPGRDGALLPGPPPKPPCQKCPPGPPGPAGPP 167
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -3
Query: 269 PPPPPXGGGXXGGXPPPA 216
PPPPP G G PPPA
Sbjct: 100 PPPPPQGADTWRGAPPPA 117
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = -2
Query: 891 PPXPXGGXXXXFFFXPXXXXXGGXGGFXGGGXXXFFXXPGGGPP 760
PP P GG P GG GG G F GGGPP
Sbjct: 771 PPPPRGGMHH---MPPPPSFRGGRGGHGGPPPPHFDRRGGGGPP 811
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/60 (31%), Positives = 21/60 (35%)
Frame = +3
Query: 498 GGXFXXPPPPPPXKKXXPXGXGGGGGGXPPXXGGXXLPPKGGXTXXKKFXXXXPXXXPPP 677
G + PPP P G GGGGG P G PP T + P P P
Sbjct: 63 GNNYNNGPPPFDGGYNRPYGGGGGGGYGRPQ--GYVPPPPPPPTQPEPEPEPRPEPQPEP 120
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 498 GGXFXXPPPPPPXKKXXPXGXGGGGGGXPPXXGG 599
GG PP PP P G GG PP GG
Sbjct: 153 GGPGPKGPPGPPGGHGEPGPAGRGGPRGPPGPGG 186
>AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical
protein F13C5.2 protein.
Length = 374
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Frame = +3
Query: 258 GGXGPPX--KKKXXGGGGPPXKKXXKKK 335
GG G P K G GGPP K+ KKK
Sbjct: 74 GGRGRPRGSKNSDGGAGGPPAKRGRKKK 101
>AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical
protein C02E7.6 protein.
Length = 70
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -3
Query: 269 PPPPPXGGGXXGGXPPPA 216
PPPPP G G PPPA
Sbjct: 31 PPPPPACGCGGGAAPPPA 48
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -2
Query: 828 GGXGGFXGGGXXXFFXXPGGG 766
GG GGF GGG F GGG
Sbjct: 262 GGGGGFGGGGRDRFNDRSGGG 282
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/59 (28%), Positives = 19/59 (32%), Gaps = 2/59 (3%)
Frame = +3
Query: 516 PPPPPPXKKXXPXGXGGGGGGXPPXXGGXXL--PPKGGXTXXKKFXXXXPXXXPPPXRG 686
PPPPP + G G PP G PP G PPP +G
Sbjct: 137 PPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSTEGNASRRPPPPPKG 195
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +3
Query: 516 PPPPPPXKKXXPXGXGGGGGGXPPXXGGXXLPP 614
PPPPP + G G PP G PP
Sbjct: 43 PPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPP 75
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/59 (28%), Positives = 19/59 (32%), Gaps = 2/59 (3%)
Frame = +3
Query: 516 PPPPPPXKKXXPXGXGGGGGGXPPXXGGXXL--PPKGGXTXXKKFXXXXPXXXPPPXRG 686
PPPPP + G G PP G PP G PPP +G
Sbjct: 106 PPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKG 164
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +3
Query: 516 PPPPPPXKKXXPXGXGGGGGGXPPXXGGXXLPP 614
PPPPP + G G PP G PP
Sbjct: 261 PPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPP 293
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +3
Query: 492 GXGGXFXXPPPPPPXKKXXPXGXGGGGGGXPPXXG 596
G GG + P PP P GGG G P G
Sbjct: 51 GGGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGG 85
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +3
Query: 492 GXGGXFXXPPPPPPXKKXXPXGXGGGGGGXPPXXG 596
G GG + P PP P GGG G P G
Sbjct: 51 GGGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGG 85
>Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical
protein K02E2.2 protein.
Length = 1021
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 767 PPPGXIKKXXXPPPKXPPXPPXF 835
PPP PPP PP PP F
Sbjct: 777 PPPFFALPVPPPPPVPPPPPPPF 799
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 28.3 bits (60), Expect = 7.8
Identities = 21/79 (26%), Positives = 24/79 (30%), Gaps = 1/79 (1%)
Frame = +1
Query: 427 FFXXXGGGGGIFXXKKXXPPPXGXGXFFXXXXXXXXXKXP-XPXGXGGGGGVXPPXXGXX 603
F GGGGG PPP G G + P GGGG P
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPPCGCGGPSLPPLQLPRFELPRLSLPSFGGGGCGGPAPCGG 76
Query: 604 XSPXKGGXPXKKNFXAXXP 660
+P P + A P
Sbjct: 77 AAPAYVAPPPAAGYAAPPP 95
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +3
Query: 492 GXGGXFXXPPPPPPXKKXXPXGXGGGGGGXPPXXGGXXLPP 614
G G PPP PP GG GG P G + P
Sbjct: 438 GAPGGSGAPPPGPPGAYPGNGAPGGPPGGPPQFPGHPGMDP 478
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +3
Query: 519 PPPPPXKKXXPXGXGGGGGGXPPXXGGXXLPPK 617
P P P G GGGGGG P G PPK
Sbjct: 618 PGGPGGGGGPPRGPGGGGGGGPT---GPPAPPK 647
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 255 GGGXGPPXKKKXXGGGGP 308
GGG GPP GGGGP
Sbjct: 622 GGGGGPPRGPGGGGGGGP 639
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 28.3 bits (60), Expect = 7.8
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 767 PPPGXIKKXXXPPPKXPPXP 826
PPPG + PPP PP P
Sbjct: 664 PPPGGLGGFMPPPPPPPPMP 683
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 28.3 bits (60), Expect = 7.8
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 767 PPPGXIKKXXXPPPKXPPXP 826
PPPG + PPP PP P
Sbjct: 664 PPPGGLGGFMPPPPPPPPMP 683
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +3
Query: 519 PPPPPXKKXXPXGXGGGGGGXPPXXGGXXLPPK 617
P P P G GGGGGG P G PPK
Sbjct: 618 PGGPGGGGGPPRGPGGGGGGGPT---GPPAPPK 647
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 255 GGGXGPPXKKKXXGGGGP 308
GGG GPP GGGGP
Sbjct: 622 GGGGGPPRGPGGGGGGGP 639
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 23.4 bits (48), Expect(2) = 8.9
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +2
Query: 800 PPPKXPPXPPXF 835
PPP PP PP +
Sbjct: 137 PPPHYPPPPPHY 148
Score = 23.0 bits (47), Expect(2) = 8.9
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = +2
Query: 767 PPPGXIKKXXXPPPKXPPXP 826
PPP + P P PP P
Sbjct: 97 PPPAPYPQHAVPAPAPPPAP 116
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.154 0.553
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,230,808
Number of Sequences: 27780
Number of extensions: 349556
Number of successful extensions: 4198
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3229
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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