Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_H21
         (1061 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    29   0.31 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    28   0.54 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   1.7  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   2.2  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    24   8.8  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 28.7 bits (61), Expect = 0.31
 Identities = 16/36 (44%), Positives = 16/36 (44%)
 Frame = -3

Query: 882 GGGRXWXGGPXGXGXXGXXPRGAPXGGGXXGGXXXG 775
           GGGR   GG  G    G   RG   GGG  GG   G
Sbjct: 66  GGGRGGRGGRGGGRGRGRG-RGGRDGGGGFGGGGYG 100


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.9 bits (59), Expect = 0.54
 Identities = 14/32 (43%), Positives = 14/32 (43%)
 Frame = -3

Query: 882 GGGRXWXGGPXGXGXXGXXPRGAPXGGGXXGG 787
           GGG    G P G G     P   P GGG  GG
Sbjct: 203 GGGGSGGGAPGGGGGSSGGP--GPGGGGGGGG 232



 Score = 25.0 bits (52), Expect = 3.8
 Identities = 20/57 (35%), Positives = 20/57 (35%), Gaps = 6/57 (10%)
 Frame = -3

Query: 927 GGEGVXGXXPXXXXXGGGRXWXGGPXGXGXXGXXPRG------APXGGGXXGGXXXG 775
           GG G  G  P     GGG     GP G G  G   R          GGG  GG   G
Sbjct: 203 GGGGSGGGAPGG---GGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGGGGGG 256


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.2 bits (55), Expect = 1.7
 Identities = 26/107 (24%), Positives = 29/107 (27%), Gaps = 6/107 (5%)
 Frame = +2

Query: 578 PSXXPPKXGGXXXX-----PXAPPTPXXPKNRRXGRPCXXEXPPPPPXLXKXXXXXXXXX 742
           P+  PP   G         P  PP P  P       P   +  PPP  L +         
Sbjct: 508 PNDGPPHGAGYDGRDLTGGPLGPPPPPPPGGAVLNIP--PQFLPPPLNLLRAPFFPLNPA 565

Query: 743 XXXXXXTXXXXPXXXPPXXPP-PXGAPRGXXPXXPXPXGPPXQXLPP 880
                      P   PP  PP P        P    P G P    PP
Sbjct: 566 QLRFPAGFPNLPNAQPPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPP 612


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.8 bits (54), Expect = 2.2
 Identities = 19/59 (32%), Positives = 20/59 (33%), Gaps = 6/59 (10%)
 Frame = +2

Query: 800 PPPXG---APRGXXPXXPXPXGPP-XQXLPPPS--XXXXGXXPXTPSPPXXXPXNXXPP 958
           PPP     AP    P  P P  PP  Q + PP          P  P PP        PP
Sbjct: 164 PPPIAHQQAPFAMDPARPNPGMPPGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPP 222



 Score = 25.8 bits (54), Expect = 2.2
 Identities = 16/52 (30%), Positives = 16/52 (30%), Gaps = 3/52 (5%)
 Frame = +2

Query: 800 PPPXGAPRGXXPXXPX---PXGPPXQXLPPPSXXXXGXXPXTPSPPXXXPXN 946
           P P G P    P  P    P   P     PPS       P    PP   P N
Sbjct: 219 PQPPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRPPMMGQPPPIRPPN 270


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.8 bits (49), Expect = 8.8
 Identities = 12/34 (35%), Positives = 12/34 (35%)
 Frame = -3

Query: 900 PXXXXXGGGRXWXGGPXGXGXXGXXPRGAPXGGG 799
           P     GGG    GG  G G  G    G   G G
Sbjct: 650 PGSGGGGGGGGGGGGSVGSGGIGSSSLGGGGGSG 683


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.317    0.140    0.486 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 522,061
Number of Sequences: 2352
Number of extensions: 7970
Number of successful extensions: 60
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 118396512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)