Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_H17
         (939 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical p...   136   3e-32
AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical ...    46   4e-05
AC025721-13|AAR85897.1|  139|Caenorhabditis elegans Hypothetical...    34   0.17 

>Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical
           protein F25H2.5 protein.
          Length = 153

 Score =  136 bits (328), Expect = 3e-32
 Identities = 71/147 (48%), Positives = 90/147 (61%), Gaps = 1/147 (0%)
 Frame = +2

Query: 167 FIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPGLXKY 346
           FI +KPDGV RGLVG II RFE++G+KLV LK +  S+  L+ HY DL  +PFFP L +Y
Sbjct: 8   FIAIKPDGVHRGLVGKIIARFEERGYKLVALKQMTASKAHLEVHYQDLKDKPFFPSLIEY 67

Query: 347 MSSGPVVPMVWEGLNVCEDWPSYASAXLTQLTXXPALSAVISXFXLGRNIIHGSDSVESA 526
           MSSGPVV MVW+GL+V +   S   A    L   P           GRNI HGSD+V+SA
Sbjct: 68  MSSGPVVAMVWQGLDVVKQGRSMLGA-TNPLASAPGTIRGDFCIQTGRNICHGSDAVDSA 126

Query: 527 XKXIGLWFTDTEVVGW-TPAXENXVYE 604
            + I  WF   E+  + +P   + VYE
Sbjct: 127 NREIAHWFKQEEINDYASPFINSWVYE 153


>AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical
           protein F55A3.6 protein.
          Length = 118

 Score = 46.0 bits (104), Expect = 4e-05
 Identities = 30/82 (36%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
 Frame = +2

Query: 317 RPFFPGLXKYMSSGPVVPMVWEGLNVCEDWPSYASAXLTQLTXXPALSAVISXFXL--GR 490
           +PFFP L  YMSSGPVV M+WEG +V +     A   L +        ++     +    
Sbjct: 33  KPFFPLLIDYMSSGPVVAMLWEGCDVVK----RARVILGEELEVGEFRSIFYDLVVRDTH 88

Query: 491 NIIHGSDSVESAXKXIGLWFTD 556
              H SDSV SA +   LWF +
Sbjct: 89  KGCHCSDSVASANREYVLWFEE 110


>AC025721-13|AAR85897.1|  139|Caenorhabditis elegans Hypothetical
           protein Y48G8AL.15 protein.
          Length = 139

 Score = 33.9 bits (74), Expect = 0.17
 Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 3/129 (2%)
 Frame = +2

Query: 170 IMVKPDGV-QRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPGLXKY 346
           +++KP+ V  R L    +      G ++  ++ +  S  L +Q Y+    + F+  L ++
Sbjct: 14  VVLKPEIVAHRVLAQVALSELRSNGIEIEEMRQMKISGSLAKQLYAQHQGKFFYDRLVRH 73

Query: 347 MSSGPVVPMVWEGLNVCEDWPSYASAXLTQLTXXPALSAVISXFXLG--RNIIHGSDSVE 520
           +SSGPV+ M   G N  +      S+ L      P +  +   F L   RN+ H SD  +
Sbjct: 74  ISSGPVIAMRVSG-NARK---CIGSSRLWP-RLEPTVQPIRQRFALSDVRNVAHASDE-D 127

Query: 521 SAXKXIGLW 547
           +A K + L+
Sbjct: 128 AAEKELQLF 136


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,163,489
Number of Sequences: 27780
Number of extensions: 221556
Number of successful extensions: 368
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 366
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2423194158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)