Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_H16
(890 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0585 - 5237547-5237930,5237995-5238072,5238163-5238405,523... 83 2e-16
01_06_0551 + 30159789-30159946,30160509-30160629,30160714-301607... 77 1e-14
01_06_0670 + 31069976-31070073,31070461-31070581,31070669-310707... 77 3e-14
01_01_0629 - 4738519-4738607,4738700-4738828,4738921-4739011,473... 77 3e-14
07_03_0474 + 18534071-18534238,18534349-18534445,18534992-185351... 57 2e-08
10_08_0551 + 18702081-18702251,18702328-18702424,18702533-187026... 52 5e-07
07_01_0225 - 1650665-1652743 30 2.1
04_01_0069 - 697811-697876,697956-698166,698265-698359,698448-69... 29 5.0
02_01_0704 - 5254458-5254760,5255091-5255182,5255285-5255501,525... 29 5.0
01_06_1314 + 36215607-36215734,36215911-36216043,36216135-362162... 29 5.0
05_04_0356 - 20584212-20584628,20584798-20584899,20585658-205857... 29 6.6
01_06_1582 - 38430573-38430599,38430750-38430857,38431503-384315... 29 6.6
>05_01_0585 -
5237547-5237930,5237995-5238072,5238163-5238405,
5238515-5238661,5238780-5238863,5238969-5239040,
5239153-5239248,5239345-5239410,5239537-5239642,
5239749-5239900,5240238-5240433,5240791-5240879
Length = 570
Score = 83.4 bits (197), Expect = 2e-16
Identities = 39/94 (41%), Positives = 58/94 (61%)
Frame = +3
Query: 42 FIFPGLALGIICAGILDISDDFMLLAAEALAEIVSDDDLAYGSLYPPLHMIKDCSVKIAK 221
+IFPG LG++ +G + + DD +L A+EALAE VS+D+ A G ++PP I+ S IA
Sbjct: 473 YIFPGFGLGVVISGAIRVHDDMLLAASEALAEQVSEDNFARGLIFPPFTNIRKISAHIAA 532
Query: 222 KIVEHAYNTGKASVQPQPLDTEEFIRAQMYSVEY 323
K+ AY G AS P+P D ++ + MY+ Y
Sbjct: 533 KVAAKAYELGLASRLPRPDDLVKYAESCMYTPAY 566
>01_06_0551 +
30159789-30159946,30160509-30160629,30160714-30160788,
30160877-30161028,30161103-30161208,30161298-30161363,
30161623-30161694,30161849-30161932,30162108-30162206,
30162841-30162888,30162986-30163039,30163137-30163235,
30163321-30163410,30163503-30163580,30163699-30163773,
30163866-30163956,30164282-30164410,30164501-30164589
Length = 561
Score = 77.4 bits (182), Expect = 1e-14
Identities = 36/94 (38%), Positives = 55/94 (58%)
Frame = +3
Query: 42 FIFPGLALGIICAGILDISDDFMLLAAEALAEIVSDDDLAYGSLYPPLHMIKDCSVKIAK 221
+IFPG LG++ +G + + DD +L A+EALA+ V+ ++ G YPP I+ S IA
Sbjct: 464 YIFPGFGLGVVMSGAIRVHDDMLLAASEALAQQVTQENFDKGLTYPPFSNIRKISAHIAA 523
Query: 222 KIVEHAYNTGKASVQPQPLDTEEFIRAQMYSVEY 323
+ AY G AS +P+P D ++ + MYS Y
Sbjct: 524 NVAAKAYELGLASRRPRPKDLVKYAESCMYSPLY 557
>01_06_0670 +
31069976-31070073,31070461-31070581,31070669-31070743,
31070863-31071014,31071171-31071276,31071409-31071474,
31071562-31071657,31071764-31071835,31071925-31072008,
31072147-31072245,31072721-31072768,31072857-31072910,
31072991-31073089,31073182-31073271,31073371-31073448,
31073584-31073658,31073806-31073896,31074014-31074142,
31074235-31074323
Length = 573
Score = 76.6 bits (180), Expect = 3e-14
Identities = 35/94 (37%), Positives = 56/94 (59%)
Frame = +3
Query: 42 FIFPGLALGIICAGILDISDDFMLLAAEALAEIVSDDDLAYGSLYPPLHMIKDCSVKIAK 221
+IFPG LG++ +G + + D+ +L AAE LA+ V+ + + G +YPP I+ S IA
Sbjct: 476 YIFPGFGLGVVISGAIRVKDEMILAAAEGLADQVTPEHVDKGLIYPPFSCIRKISANIAA 535
Query: 222 KIVEHAYNTGKASVQPQPLDTEEFIRAQMYSVEY 323
++ AY+ G AS P+P D ++ + MYS Y
Sbjct: 536 RVAAKAYDLGLASHLPRPKDLVKYAESCMYSPIY 569
>01_01_0629 -
4738519-4738607,4738700-4738828,4738921-4739011,
4739103-4739177,4739529-4739618,4739742-4739840,
4739934-4739987,4740084-4740131,4740232-4740330,
4740458-4740541,4740650-4740721,4740812-4740907,
4741012-4741077,4741148-4741253,4741350-4741501,
4741634-4741708,4741792-4741912,4742968-4743209,
4743328-4743381
Length = 613
Score = 76.6 bits (180), Expect = 3e-14
Identities = 33/94 (35%), Positives = 56/94 (59%)
Frame = +3
Query: 42 FIFPGLALGIICAGILDISDDFMLLAAEALAEIVSDDDLAYGSLYPPLHMIKDCSVKIAK 221
+IFPG LG++ +G + + +D +L A+E LA+ + ++ GS++PP I+ S +IA
Sbjct: 516 YIFPGFGLGVVISGAVRVHEDMLLAASETLADQATQENFEKGSIFPPFTNIRKISARIAA 575
Query: 222 KIVEHAYNTGKASVQPQPLDTEEFIRAQMYSVEY 323
+ AY G A+ PQP D E++ + MY+ Y
Sbjct: 576 SVAAKAYELGLATRLPQPRDLEKYAESCMYTPVY 609
>07_03_0474 +
18534071-18534238,18534349-18534445,18534992-18535122,
18535191-18535286,18535459-18535464,18535521-18535688,
18535892-18536020,18536613-18536673,18536928-18537031,
18537137-18537220,18538433-18538461,18538506-18538617,
18539200-18539313,18539767-18539832,18540237-18540309,
18540396-18540482,18540710-18540764,18540869-18540940,
18541039-18541101,18541177-18541294,18541377-18541451
Length = 635
Score = 56.8 bits (131), Expect = 2e-08
Identities = 25/71 (35%), Positives = 46/71 (64%)
Frame = +3
Query: 27 GNSLRFIFPGLALGIICAGILDISDDFMLLAAEALAEIVSDDDLAYGSLYPPLHMIKDCS 206
GN++ ++FPG+ LG + +G ISD + AAE LA + ++++ G +YPP+ I+D +
Sbjct: 519 GNNM-YLFPGIGLGTLLSGARVISDGMLQAAAERLASYMKEEEVLEGIVYPPISRIRDIT 577
Query: 207 VKIAKKIVEHA 239
++A +V+ A
Sbjct: 578 KEVAAAVVKEA 588
>10_08_0551 +
18702081-18702251,18702328-18702424,18702533-18702651,
18702757-18702924,18703296-18703424,18703659-18703719,
18703813-18703916,18704173-18704279,18704319-18704493,
18704657-18704770,18704883-18704966,18705536-18705608,
18705689-18705775,18705863-18705917,18706007-18706078,
18706470-18706532,18706640-18706754,18706844-18706915
Length = 621
Score = 52.4 bits (120), Expect = 5e-07
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 10/100 (10%)
Frame = +3
Query: 42 FIFPGLALGIICAGILDISDDFMLLAAEALAEIVSDDDLAYGSLYPPLHMIKDCSVKIAK 221
++FPG+ LG + +G I+D + AAE LA ++DD++ G L+P + I+ + ++
Sbjct: 511 YLFPGIGLGALLSGARHITDGMLQSAAECLASYITDDEIRKGILFPSISSIRHITARVGA 570
Query: 222 KIVEHAYN----TGKASVQPQPL------DTEEFIRAQMY 311
+V A + G+ V + L DT +F+ +M+
Sbjct: 571 AVVRAAVDEDLAEGRCDVDARDLKSMTEADTVDFVARKMW 610
>07_01_0225 - 1650665-1652743
Length = 692
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 6 ISXRLTIGNSLRFIFPGLALGIICAGILDISDDFMLLAAEALAEIVSDD 152
+ R T F+F ++ GI CA + SDD +L A +++DD
Sbjct: 16 VQVRQTSHTKFFFLFLLVSFGINCASFTNTSDDQLLYLGFTSANLITDD 64
>04_01_0069 -
697811-697876,697956-698166,698265-698359,698448-698513,
698595-698643,698720-698770,698856-698908,699263-699331,
699874-699928,700011-700099,700217-700302,700376-700432,
700575-700716,701637-702032
Length = 494
Score = 29.1 bits (62), Expect = 5.0
Identities = 18/53 (33%), Positives = 22/53 (41%)
Frame = +3
Query: 330 ALPPAYPWPDNQPRVAII*PPHTTTHNRLVSKATLRTVCLVRVNVLDNVKVNE 488
A+ PA P P QP VA+ PP TT + N DN + NE
Sbjct: 88 AVTPARP-PPQQPAVAVAAPPPATTMATATEEVAAPATGNPMANAADNEEKNE 139
>02_01_0704 -
5254458-5254760,5255091-5255182,5255285-5255501,
5255972-5256068,5256175-5256415,5257100-5257180,
5257236-5257383
Length = 392
Score = 29.1 bits (62), Expect = 5.0
Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Frame = +3
Query: 54 GLALGIICAGILDISDDFMLLAAEALAEIVSDDDLAYGSLYPPLHMIKDCS--VKIAKKI 227
GLA+G+ +LD DD ++ A I++ D + + P I D + IA +
Sbjct: 38 GLAVGVGFGLVLDEKDDMARAGSDTFAAIITQVDCLHELVQRPREQIADAETLLDIANTL 97
Query: 228 VEHAYNTGKASVQPQPLDT 284
V + + P T
Sbjct: 98 VTSVRSQSSEGITPSDFVT 116
>01_06_1314 +
36215607-36215734,36215911-36216043,36216135-36216281,
36217172-36217348,36217469-36217717,36217917-36217964,
36218364-36218419,36218639-36218720,36219260-36219515,
36219563-36219629,36219688-36219724,36219918-36220030,
36220838-36220988,36221352-36221538,36221768-36221841
Length = 634
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 748 CPQPTYCS*MTSILDVELCTVSLRCPEILASCKLXIRSE 864
C QP ++S EL + L P I+ CKL +R E
Sbjct: 66 CDQPATLERLSSFWFPELRRLQLEAPVIVVGCKLDLRGE 104
>05_04_0356 -
20584212-20584628,20584798-20584899,20585658-20585705,
20586046-20586186,20586315-20586437,20587166-20587252,
20587630-20587742,20587844-20587943,20588217-20588601,
20588841-20588917,20589501-20589593,20589697-20589774,
20590923-20591246
Length = 695
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +3
Query: 297 RAQMYSVEYGAALPPAYPWPDNQPRVAII*PPHTTTH 407
R + + GAALPP P QP VA + P TH
Sbjct: 74 RKMLKEADLGAALPPPPPAAAAQPAVAPLPGPSGATH 110
>01_06_1582 -
38430573-38430599,38430750-38430857,38431503-38431569,
38431847-38432070,38432154-38432246,38432665-38432717,
38433122-38433572
Length = 340
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = -1
Query: 641 VQRDVDEGGYVVSCVLRVNVLDSVKVSSYLYGMVSFSYV 525
+ + + E G+ V +LR++ L + +YLYG+ S ++
Sbjct: 230 IDKAIGENGFKVVTLLRLSPLLPFSLGNYLYGLTSVKFL 268
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,784,718
Number of Sequences: 37544
Number of extensions: 378568
Number of successful extensions: 837
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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