SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_H16
         (890 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X77244-1|CAA54460.1|  572|Homo sapiens malate dehydrogenase (oxa...   118   2e-26
U43944-1|AAC50613.1|  565|Homo sapiens cytosolic NADP(+)-depende...   118   2e-26
BC025246-1|AAH25246.1|  572|Homo sapiens malic enzyme 1, NADP(+)...   118   2e-26
BC017403-1|AAH17403.1|  233|Homo sapiens Unknown (protein for IM...   118   2e-26
AL391416-2|CAH73129.1|  572|Homo sapiens malic enzyme 1, NADP(+)...   118   2e-26
AL136970-1|CAC19505.2|  572|Homo sapiens malic enzyme 1, NADP(+)...   118   2e-26
AL049699-1|CAI22634.1|  572|Homo sapiens malic enzyme 1, NADP(+)...   118   2e-26
AK223417-1|BAD97137.1|  572|Homo sapiens cytosolic malic enzyme ...   118   2e-26
L34035-1|AAB01380.1|  572|Homo sapiens NADP-dependent malic enzy...   115   2e-25
X79440-1|CAA55956.1|  604|Homo sapiens malate dehydrogenase (oxa...   105   2e-22
BC022472-1|AAH22472.1|  604|Homo sapiens malic enzyme 3, NADP(+)...   105   2e-22
M55905-1|AAA36197.1|  584|Homo sapiens mitochondrial NAD(P)+ -de...    93   9e-19
AJ294818-1|CAC14574.1|  164|Homo sapiens malic enzyme 2 protein.       91   4e-18

>X77244-1|CAA54460.1|  572|Homo sapiens malate dehydrogenase
           (oxaloacetate decarboxylating) (NADP+) protein.
          Length = 572

 Score =  118 bits (285), Expect = 2e-26
 Identities = 53/116 (45%), Positives = 78/116 (67%)
 Frame = +3

Query: 27  GNSLRFIFPGLALGIICAGILDISDDFMLLAAEALAEIVSDDDLAYGSLYPPLHMIKDCS 206
           GN+  ++FPG+ALG++  G+  I+D+  L  AE +A+ VSD  L  G LYPPL+ I+D S
Sbjct: 452 GNN-SYVFPGVALGVVACGLRQITDNIFLTTAEVIAQQVSDKHLEEGRLYPPLNTIRDVS 510

Query: 207 VKIAKKIVEHAYNTGKASVQPQPLDTEEFIRAQMYSVEYGAALPPAYPWPDNQPRV 374
           +KIA+KIV+ AY    A+V P+P + E F+R+QMYS +Y   LP  Y WP+   ++
Sbjct: 511 LKIAEKIVKDAYQEKTATVYPEPQNKEAFVRSQMYSTDYDQILPDCYSWPEEVQKI 566


>U43944-1|AAC50613.1|  565|Homo sapiens cytosolic NADP(+)-dependent
           malic enzyme protein.
          Length = 565

 Score =  118 bits (285), Expect = 2e-26
 Identities = 53/116 (45%), Positives = 78/116 (67%)
 Frame = +3

Query: 27  GNSLRFIFPGLALGIICAGILDISDDFMLLAAEALAEIVSDDDLAYGSLYPPLHMIKDCS 206
           GN+  ++FPG+ALG++  G+  I+D+  L  AE +A+ VSD  L  G LYPPL+ I+D S
Sbjct: 445 GNN-SYVFPGVALGVVACGLRQITDNIFLTTAEVIAQQVSDKHLEEGRLYPPLNTIRDVS 503

Query: 207 VKIAKKIVEHAYNTGKASVQPQPLDTEEFIRAQMYSVEYGAALPPAYPWPDNQPRV 374
           +KIA+KIV+ AY    A+V P+P + E F+R+QMYS +Y   LP  Y WP+   ++
Sbjct: 504 LKIAEKIVKDAYQEKTATVYPEPQNKEAFVRSQMYSTDYDQILPDCYSWPEEVQKI 559


>BC025246-1|AAH25246.1|  572|Homo sapiens malic enzyme 1,
           NADP(+)-dependent, cytosolic protein.
          Length = 572

 Score =  118 bits (285), Expect = 2e-26
 Identities = 53/116 (45%), Positives = 78/116 (67%)
 Frame = +3

Query: 27  GNSLRFIFPGLALGIICAGILDISDDFMLLAAEALAEIVSDDDLAYGSLYPPLHMIKDCS 206
           GN+  ++FPG+ALG++  G+  I+D+  L  AE +A+ VSD  L  G LYPPL+ I+D S
Sbjct: 452 GNN-SYVFPGVALGVVACGLRQITDNIFLTTAEVIAQQVSDKHLEEGRLYPPLNTIRDVS 510

Query: 207 VKIAKKIVEHAYNTGKASVQPQPLDTEEFIRAQMYSVEYGAALPPAYPWPDNQPRV 374
           +KIA+KIV+ AY    A+V P+P + E F+R+QMYS +Y   LP  Y WP+   ++
Sbjct: 511 LKIAEKIVKDAYQEKTATVYPEPQNKEAFVRSQMYSTDYDQILPDCYSWPEEVQKI 566


>BC017403-1|AAH17403.1|  233|Homo sapiens Unknown (protein for
           IMAGE:4290619) protein.
          Length = 233

 Score =  118 bits (285), Expect = 2e-26
 Identities = 53/116 (45%), Positives = 78/116 (67%)
 Frame = +3

Query: 27  GNSLRFIFPGLALGIICAGILDISDDFMLLAAEALAEIVSDDDLAYGSLYPPLHMIKDCS 206
           GN+  ++FPG+ALG++  G+  I+D+  L  AE +A+ VSD  L  G LYPPL+ I+D S
Sbjct: 113 GNN-SYVFPGVALGVVACGLRQITDNIFLTTAEVIAQQVSDKHLEEGRLYPPLNTIRDVS 171

Query: 207 VKIAKKIVEHAYNTGKASVQPQPLDTEEFIRAQMYSVEYGAALPPAYPWPDNQPRV 374
           +KIA+KIV+ AY    A+V P+P + E F+R+QMYS +Y   LP  Y WP+   ++
Sbjct: 172 LKIAEKIVKDAYQEKTATVYPEPQNKEAFVRSQMYSTDYDQILPDCYSWPEEVQKI 227


>AL391416-2|CAH73129.1|  572|Homo sapiens malic enzyme 1,
           NADP(+)-dependent, cytosolic protein.
          Length = 572

 Score =  118 bits (285), Expect = 2e-26
 Identities = 53/116 (45%), Positives = 78/116 (67%)
 Frame = +3

Query: 27  GNSLRFIFPGLALGIICAGILDISDDFMLLAAEALAEIVSDDDLAYGSLYPPLHMIKDCS 206
           GN+  ++FPG+ALG++  G+  I+D+  L  AE +A+ VSD  L  G LYPPL+ I+D S
Sbjct: 452 GNN-SYVFPGVALGVVACGLRQITDNIFLTTAEVIAQQVSDKHLEEGRLYPPLNTIRDVS 510

Query: 207 VKIAKKIVEHAYNTGKASVQPQPLDTEEFIRAQMYSVEYGAALPPAYPWPDNQPRV 374
           +KIA+KIV+ AY    A+V P+P + E F+R+QMYS +Y   LP  Y WP+   ++
Sbjct: 511 LKIAEKIVKDAYQEKTATVYPEPQNKEAFVRSQMYSTDYDQILPDCYSWPEEVQKI 566


>AL136970-1|CAC19505.2|  572|Homo sapiens malic enzyme 1,
           NADP(+)-dependent, cytosolic protein.
          Length = 572

 Score =  118 bits (285), Expect = 2e-26
 Identities = 53/116 (45%), Positives = 78/116 (67%)
 Frame = +3

Query: 27  GNSLRFIFPGLALGIICAGILDISDDFMLLAAEALAEIVSDDDLAYGSLYPPLHMIKDCS 206
           GN+  ++FPG+ALG++  G+  I+D+  L  AE +A+ VSD  L  G LYPPL+ I+D S
Sbjct: 452 GNN-SYVFPGVALGVVACGLRQITDNIFLTTAEVIAQQVSDKHLEEGRLYPPLNTIRDVS 510

Query: 207 VKIAKKIVEHAYNTGKASVQPQPLDTEEFIRAQMYSVEYGAALPPAYPWPDNQPRV 374
           +KIA+KIV+ AY    A+V P+P + E F+R+QMYS +Y   LP  Y WP+   ++
Sbjct: 511 LKIAEKIVKDAYQEKTATVYPEPQNKEAFVRSQMYSTDYDQILPDCYSWPEEVQKI 566


>AL049699-1|CAI22634.1|  572|Homo sapiens malic enzyme 1,
           NADP(+)-dependent, cytosolic protein.
          Length = 572

 Score =  118 bits (285), Expect = 2e-26
 Identities = 53/116 (45%), Positives = 78/116 (67%)
 Frame = +3

Query: 27  GNSLRFIFPGLALGIICAGILDISDDFMLLAAEALAEIVSDDDLAYGSLYPPLHMIKDCS 206
           GN+  ++FPG+ALG++  G+  I+D+  L  AE +A+ VSD  L  G LYPPL+ I+D S
Sbjct: 452 GNN-SYVFPGVALGVVACGLRQITDNIFLTTAEVIAQQVSDKHLEEGRLYPPLNTIRDVS 510

Query: 207 VKIAKKIVEHAYNTGKASVQPQPLDTEEFIRAQMYSVEYGAALPPAYPWPDNQPRV 374
           +KIA+KIV+ AY    A+V P+P + E F+R+QMYS +Y   LP  Y WP+   ++
Sbjct: 511 LKIAEKIVKDAYQEKTATVYPEPQNKEAFVRSQMYSTDYDQILPDCYSWPEEVQKI 566


>AK223417-1|BAD97137.1|  572|Homo sapiens cytosolic malic enzyme 1
           variant protein.
          Length = 572

 Score =  118 bits (285), Expect = 2e-26
 Identities = 53/116 (45%), Positives = 78/116 (67%)
 Frame = +3

Query: 27  GNSLRFIFPGLALGIICAGILDISDDFMLLAAEALAEIVSDDDLAYGSLYPPLHMIKDCS 206
           GN+  ++FPG+ALG++  G+  I+D+  L  AE +A+ VSD  L  G LYPPL+ I+D S
Sbjct: 452 GNN-SYVFPGVALGVVACGLRQITDNIFLTTAEVIAQQVSDKHLEEGRLYPPLNTIRDVS 510

Query: 207 VKIAKKIVEHAYNTGKASVQPQPLDTEEFIRAQMYSVEYGAALPPAYPWPDNQPRV 374
           +KIA+KIV+ AY    A+V P+P + E F+R+QMYS +Y   LP  Y WP+   ++
Sbjct: 511 LKIAEKIVKDAYQEKTATVYPEPQNKEAFVRSQMYSTDYDQILPDCYSWPEEVQKI 566


>L34035-1|AAB01380.1|  572|Homo sapiens NADP-dependent malic enzyme
           protein.
          Length = 572

 Score =  115 bits (277), Expect = 2e-25
 Identities = 53/110 (48%), Positives = 72/110 (65%)
 Frame = +3

Query: 27  GNSLRFIFPGLALGIICAGILDISDDFMLLAAEALAEIVSDDDLAYGSLYPPLHMIKDCS 206
           GN+  ++FPG+ALG++  G+  I D   L  AE +++ VSD  L  G LYPPL+ I+D S
Sbjct: 452 GNN-SYVFPGVALGVVACGLRHIDDKVFLTTAEVISQQVSDKHLQEGRLYPPLNTIRDVS 510

Query: 207 VKIAKKIVEHAYNTGKASVQPQPLDTEEFIRAQMYSVEYGAALPPAYPWP 356
           +KIA KIV+ AY    A+V P+P + EEF+ +QMYS  Y   LP  YPWP
Sbjct: 511 LKIAVKIVQDAYKEKMATVYPEPQNKEEFVSSQMYSTNYDQILPDCYPWP 560


>X79440-1|CAA55956.1|  604|Homo sapiens malate dehydrogenase
           (oxaloacetate decarboxylating) (NADP+) protein.
          Length = 604

 Score =  105 bits (252), Expect = 2e-22
 Identities = 49/119 (41%), Positives = 75/119 (63%)
 Frame = +3

Query: 27  GNSLRFIFPGLALGIICAGILDISDDFMLLAAEALAEIVSDDDLAYGSLYPPLHMIKDCS 206
           GN+  ++FPG+ALG+I  GI  I D+  LL AE +A+ VS+  L+ G LYPPL  I+D S
Sbjct: 487 GNNA-YVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLSTIRDVS 545

Query: 207 VKIAKKIVEHAYNTGKASVQPQPLDTEEFIRAQMYSVEYGAALPPAYPWPDNQPRVAII 383
           ++IA K++++AY    AS  P+P D E F+R+ +Y+ +Y +    +Y WP     V  +
Sbjct: 546 LRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMNVQTV 604


>BC022472-1|AAH22472.1|  604|Homo sapiens malic enzyme 3,
           NADP(+)-dependent, mitochondrial protein.
          Length = 604

 Score =  105 bits (252), Expect = 2e-22
 Identities = 49/119 (41%), Positives = 75/119 (63%)
 Frame = +3

Query: 27  GNSLRFIFPGLALGIICAGILDISDDFMLLAAEALAEIVSDDDLAYGSLYPPLHMIKDCS 206
           GN+  ++FPG+ALG+I  GI  I D+  LL AE +A+ VS+  L+ G LYPPL  I+D S
Sbjct: 487 GNNA-YVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLSTIRDVS 545

Query: 207 VKIAKKIVEHAYNTGKASVQPQPLDTEEFIRAQMYSVEYGAALPPAYPWPDNQPRVAII 383
           ++IA K++++AY    AS  P+P D E F+R+ +Y+ +Y +    +Y WP     V  +
Sbjct: 546 LRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMNVQTV 604


>M55905-1|AAA36197.1|  584|Homo sapiens mitochondrial NAD(P)+
           -dependent malic enzyme protein.
          Length = 584

 Score = 93.5 bits (222), Expect = 9e-19
 Identities = 45/119 (37%), Positives = 71/119 (59%)
 Frame = +3

Query: 27  GNSLRFIFPGLALGIICAGILDISDDFMLLAAEALAEIVSDDDLAYGSLYPPLHMIKDCS 206
           GN++ +IFPG+AL +I      ISD   L AA+AL   ++D++LA G LYPPL  I++ S
Sbjct: 465 GNNV-YIFPGVALAVILCNTRHISDSVFLEAAKALTSQLTDEELAQGRLYPPLANIQEVS 523

Query: 207 VKIAKKIVEHAYNTGKASVQPQPLDTEEFIRAQMYSVEYGAALPPAYPWPDNQPRVAII 383
           + IA K+ E+ Y    A   P+P D  ++++ + +  EY + LP  Y WP++     +I
Sbjct: 524 INIAIKVTEYLYANKMAFRYPEPEDKAKYVKERTWRSEYDSLLPDVYEWPESASSPPVI 582


>AJ294818-1|CAC14574.1|  164|Homo sapiens malic enzyme 2 protein.
          Length = 164

 Score = 91.5 bits (217), Expect = 4e-18
 Identities = 44/119 (36%), Positives = 70/119 (58%)
 Frame = +3

Query: 27  GNSLRFIFPGLALGIICAGILDISDDFMLLAAEALAEIVSDDDLAYGSLYPPLHMIKDCS 206
           GN++ +IFPG+AL +       ISD   L AA+AL   ++D++LA G LYPPL  I++ S
Sbjct: 45  GNNV-YIFPGVALAVXLCNTRHISDSVFLEAAKALTSQLTDEELAQGRLYPPLANIQEVS 103

Query: 207 VKIAKKIVEHAYNTGKASVQPQPLDTEEFIRAQMYSVEYGAALPPAYPWPDNQPRVAII 383
           + IA K+ E+ Y    A   P+P D  ++++ + +  EY + LP  Y WP++     +I
Sbjct: 104 INIAIKVTEYLYANKMAFRYPEPEDKAKYVKERTWRSEYDSLLPDVYEWPESASSPPVI 162


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,225,947
Number of Sequences: 237096
Number of extensions: 1901146
Number of successful extensions: 7655
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 7535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7655
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -