Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_H14
(891 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0076 + 22558105-22558261,22558356-22558405,22559837-225600... 36 0.057
02_05_0702 - 31027908-31027958,31028062-31029311,31029665-310298... 34 0.17
10_07_0063 - 12502305-12503361,12503567-12503668,12504251-125043... 30 2.1
01_01_0568 - 4207812-4209587,4210056-4210291,4210647-4210793,421... 30 2.1
03_05_0325 + 23135816-23135894,23136161-23136333,23136440-231366... 30 2.8
01_01_0384 - 2970369-2970726,2970812-2970882,2971428-2971509,297... 30 2.8
11_05_0035 - 18509505-18509615,18509840-18509950,18510318-185103... 29 3.8
05_04_0285 - 19825106-19826988,19828479-19828529,19830013-19830361 29 6.6
02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,265... 29 6.6
07_03_1462 + 26716197-26716484,26716618-26716746,26716963-267170... 28 8.7
>04_04_0076 +
22558105-22558261,22558356-22558405,22559837-22560044,
22560112-22560237,22560469-22560567,22560729-22561405,
22561483-22561731,22561808-22561936,22562021-22562089,
22562183-22562256,22563086-22563098,22563361-22563468,
22563541-22563651,22563725-22563811,22564043-22564068,
22564840-22564906,22565123-22565212,22565295-22565387,
22565515-22565604,22565699-22565761,22566349-22566447
Length = 894
Score = 35.5 bits (78), Expect = 0.057
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +1
Query: 313 QTKLVARRSSDDCDELQDEIEKLRENLKEKQNELFQLQ 426
Q K + ++ ++C +LQDE+E L+++ +EKQ L QLQ
Sbjct: 665 QMKSLTKKHEENCQKLQDELE-LQKSKEEKQRALLQLQ 701
>02_05_0702 - 31027908-31027958,31028062-31029311,31029665-31029842,
31029955-31030017,31031597-31031704,31031772-31031836,
31031928-31032015,31032104-31032157,31032234-31032380,
31033358-31033429,31034077-31034226,31034317-31034430,
31034762-31034875,31035925-31036077,31037437-31037529,
31038202-31038318,31038984-31039086,31039192-31039376,
31039448-31039522,31040451-31040534,31041547-31041588,
31041668-31041847,31042109-31042162,31042239-31042280,
31042869-31042967,31043040-31043174,31043325-31043427,
31045061-31045134,31045227-31045270,31045393-31045471,
31045592-31045705,31045842-31045946,31046027-31046161,
31046447-31046546,31046870-31046883,31046936-31047004,
31047079-31047182,31047299-31047347,31047931-31048023,
31048102-31048210,31048619-31048755,31048851-31048928,
31049015-31049104,31049402-31049467,31049546-31049638,
31049711-31049839,31050024-31050122,31051366-31051512,
31051605-31051910
Length = 2050
Score = 33.9 bits (74), Expect = 0.17
Identities = 21/76 (27%), Positives = 45/76 (59%)
Frame = +1
Query: 313 QTKLVARRSSDDCDELQDEIEKLRENLKEKQNELFQLQRNSYKHKSSPVKKKSEQFVRPQ 492
+TKL +R+ +D+ +L++E+EK +E + + N+ + LQ + + K+ E ++
Sbjct: 956 ETKLKSRKENDELFQLKEELEKYKE--EAQANKSYMLQYKEIANSNESALKQMESALQDF 1013
Query: 493 KIVLTNSIDSLKRNLE 540
K T S +++K++LE
Sbjct: 1014 K---TES-ETIKKSLE 1025
>10_07_0063 -
12502305-12503361,12503567-12503668,12504251-12504378,
12504653-12504764,12504876-12504927,12505260-12505517,
12505943-12506079,12506296-12506606
Length = 718
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Frame = +1
Query: 376 KLRE-NLKEKQNELFQLQRNSYKHKSSP---VKKKSEQFVRPQKIVLTNSI 516
K RE +K+K+NE + + ++KS + KKS Q V PQ V TN++
Sbjct: 314 KTREVRIKDKENERMRRLNRNKENKSKGQDNMNKKSSQAVFPQHTVTTNTV 364
>01_01_0568 -
4207812-4209587,4210056-4210291,4210647-4210793,
4211857-4212145
Length = 815
Score = 30.3 bits (65), Expect = 2.1
Identities = 25/97 (25%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Frame = +1
Query: 283 MKQTKITKLFQTKLVARRSSDDCDELQDEIEKLRENLKEKQNELFQL--QRNSYKHKSSP 456
M++ KL + + V++ SD+ +++ + K +E L+ NEL + R++ K +
Sbjct: 552 MQEGLTNKLGEVESVSKALSDELVSVKEMVHKGQEELEATSNELASIVEARDNLKKELLD 611
Query: 457 VKKK----SEQFVRPQKIV--LTNSIDSLKRNLELMS 549
V KK S++ V +K V L +++L + L++ S
Sbjct: 612 VFKKLESTSQELVDERKTVTTLNRELEALVKQLQMDS 648
>03_05_0325 +
23135816-23135894,23136161-23136333,23136440-23136613,
23136881-23137004,23137090-23137190,23137337-23137423,
23137801-23137896,23138209-23138329,23138475-23138603,
23139458-23139549,23139660-23139771,23140189-23140541,
23140670-23140899,23141179-23141278,23143357-23143411,
23143548-23145496,23145587-23145745,23146514-23146685,
23146758-23147056,23147246-23147521
Length = 1626
Score = 29.9 bits (64), Expect = 2.8
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +1
Query: 334 RSSDDCDELQDEIEKLRENLKEKQNELFQLQRNSYKHKSSPVKKKSEQF-VRPQKIVLTN 510
R++DDC L ++++ L +NL + +Q+ K ++ +K K+ F VR + + N
Sbjct: 349 RATDDCSMLFEKLDSLADNLAD------DMQKECLKGRTLTLKLKTAAFEVRTRAVTTQN 402
Query: 511 SIDS 522
I+S
Sbjct: 403 YINS 406
>01_01_0384 -
2970369-2970726,2970812-2970882,2971428-2971509,
2971757-2971818,2972308-2972401,2972502-2972569,
2972681-2972747,2972830-2972960,2973093-2973200,
2973577-2973642,2973706-2973774,2973990-2974115,
2974167-2974284,2974741-2974847,2975889-2976009,
2976162-2976235,2976955-2977051,2977564-2977679,
2978218-2978313,2978426-2978635,2979101-2979253
Length = 797
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +1
Query: 304 KLFQTK--LVARRSSDDCDELQDEIEKLRENLKEKQNELFQLQRNSYKHKSSPVKKKSEQ 477
KLF ++ + +RR +D L EIEKLRE + + ++ + P K+++E
Sbjct: 668 KLFYSEQGVNSRRDDEDVRNLFSEIEKLRERFESVERPTLDIE---VRRAKVPTKERAES 724
Query: 478 FVRPQKIVLTNSIDSL 525
P ++ T +++
Sbjct: 725 SPSPVQVPSTPKAETV 740
>11_05_0035 -
18509505-18509615,18509840-18509950,18510318-18510377,
18510459-18510576,18510711-18510811,18510891-18510962,
18511069-18511156,18511423-18511557,18511655-18511767,
18511980-18512051,18512154-18512258,18512371-18512484,
18512587-18512681,18513539-18513686
Length = 480
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/57 (28%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = +1
Query: 283 MKQTKITKLFQTK--LVARRSSDDCDELQDEIEKLRENLKEKQNELFQLQRNSYKHK 447
++ TKI +LF K L A++ DE+ +E+E+ +++ + E +L+++S + K
Sbjct: 212 LRVTKIDRLFSKKKQLRAKKDPKKTDEVNEEVEEQEFSVERIRLEKMELRKSSTEAK 268
>05_04_0285 - 19825106-19826988,19828479-19828529,19830013-19830361
Length = 760
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/89 (19%), Positives = 35/89 (39%), Gaps = 3/89 (3%)
Frame = +1
Query: 424 QRNSYKHKSSPVKKKSEQFVRPQKIVLTNSIDSLKRNLELMSILTGMEVQSYVVGEHC-- 597
Q+N KH+ ++ E R + +++ +++L + L M + + + E C
Sbjct: 268 QKNEKKHQRQKERRAQELHERCKGYLMSRKLEALAQKLVAMGFSSDQATMALIQNEGCLE 327
Query: 598 -CVVYHMQHDSDNVVKHGLRIEMQAGANV 681
V + D K + Q G N+
Sbjct: 328 ESVAWLCSFDGSEEAKQQTAADQQPGVNL 356
>02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,
2657523-2657649,2657731-2657812,2658172-2658196
Length = 2621
Score = 28.7 bits (61), Expect = 6.6
Identities = 24/111 (21%), Positives = 54/111 (48%), Gaps = 11/111 (9%)
Frame = +1
Query: 343 DDCDELQDEIEKLRENLKEKQNELFQLQ---RNSYKHKSSPVKKKSEQFVRPQKIV--LT 507
+DC++L+ I + ++ K +LF + +N + +++ ++ E + Q +
Sbjct: 2080 NDCNDLKSRIHEHGFSVDRKAADLFNVMSNLQNKFTSQNTELESLRENIIELQSEIKQRD 2139
Query: 508 NSIDSLKRNLELM-----SILTGMEVQSYV-VGEHCCVVYHMQHDSDNVVK 642
I S++RNL L+ S ++ +E + + G+H C V +D+ +K
Sbjct: 2140 EEILSMRRNLSLLYEACTSSVSEIEGMTGIESGDHSCSVVQNHLSADDHIK 2190
>07_03_1462 +
26716197-26716484,26716618-26716746,26716963-26717055,
26717581-26717721,26718021-26718089,26718207-26718290,
26718784-26718964,26719055-26719171,26719245-26719303,
26719595-26719729,26719865-26720014,26720170-26720208
Length = 494
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 355 ELQDEIEKLRENLKEKQNELFQLQRNSYKHKS 450
++++EIE LRE L EK + L + + H+S
Sbjct: 243 DIENEIEVLREQLAEKSSNCVHLLKELHLHQS 274
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,777,677
Number of Sequences: 37544
Number of extensions: 283310
Number of successful extensions: 878
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 877
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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