Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_H14
(891 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82069-1|CAB04902.1| 667|Caenorhabditis elegans Hypothetical pr... 35 0.068
Z81586-5|CAB04696.1| 484|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z81516-7|CAB04207.1| 1377|Caenorhabditis elegans Hypothetical pr... 32 0.63
Z81467-6|CAB03874.1| 1377|Caenorhabditis elegans Hypothetical pr... 32 0.63
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 32 0.63
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 32 0.63
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 32 0.63
U50135-2|AAM98043.1| 1584|Caenorhabditis elegans Uncoordinated p... 31 1.5
U50135-1|AAM98044.2| 1628|Caenorhabditis elegans Uncoordinated p... 31 1.5
M58582-1|AAA03517.1| 1584|Caenorhabditis elegans kinesin-related... 31 1.5
Z77659-8|CAB01170.1| 958|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z77657-11|CAB01153.1| 958|Caenorhabditis elegans Hypothetical p... 30 1.9
U53344-3|AAA96224.1| 702|Caenorhabditis elegans Hypothetical pr... 30 1.9
AF295093-1|AAG03081.1| 958|Caenorhabditis elegans bimC kinesin ... 30 1.9
AB024428-1|BAC19818.1| 958|Caenorhabditis elegans kinesin like ... 30 1.9
Z81496-1|CAB04067.1| 226|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z69787-10|CAH65466.1| 398|Caenorhabditis elegans Hypothetical p... 30 2.6
Z30423-1|CAA83003.1| 1681|Caenorhabditis elegans Hypothetical pr... 30 2.6
AL021492-4|CAA16384.1| 492|Caenorhabditis elegans Hypothetical ... 30 2.6
Z92793-2|CAD56589.1| 684|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z92793-1|CAB07229.1| 681|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z72503-11|CAD56560.1| 684|Caenorhabditis elegans Hypothetical p... 29 3.4
Z72503-10|CAA96601.1| 681|Caenorhabditis elegans Hypothetical p... 29 3.4
Z68161-9|CAA92298.2| 688|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z50070-8|CAA90397.1| 263|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z99280-6|CAB16502.1| 418|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z96047-2|CAB09411.1| 566|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z82284-9|CAB05295.1| 418|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z81513-2|CAB04186.2| 489|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z50109-1|CAA90433.3| 142|Caenorhabditis elegans Hypothetical pr... 29 4.5
X74027-1|CAA52188.1| 566|Caenorhabditis elegans lamin protein. 29 4.5
U80453-12|AAN63454.1| 419|Caenorhabditis elegans Hypothetical p... 29 4.5
AF515833-1|AAM55225.1| 489|Caenorhabditis elegans synaptonemal ... 29 4.5
U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily as... 29 5.9
U39645-5|AAU05591.1| 345|Caenorhabditis elegans Hypothetical pr... 29 5.9
U39645-4|AAU05592.1| 341|Caenorhabditis elegans Hypothetical pr... 29 5.9
U13876-2|AAM48539.1| 373|Caenorhabditis elegans Hypothetical pr... 29 5.9
U13876-1|AAM48538.1| 353|Caenorhabditis elegans Hypothetical pr... 29 5.9
AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical ... 29 5.9
AF000261-9|AAB52923.3| 200|Caenorhabditis elegans Hypothetical ... 29 5.9
Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical p... 28 7.8
Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical p... 28 7.8
U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromos... 28 7.8
U00066-1|AAA50742.1| 490|Caenorhabditis elegans High incidence ... 28 7.8
AY204190-1|AAO39194.1| 382|Caenorhabditis elegans nuclear recep... 28 7.8
AL132862-2|CAB70224.1| 1019|Caenorhabditis elegans Hypothetical ... 28 7.8
AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical ... 28 7.8
AF022978-5|AAG24181.2| 382|Caenorhabditis elegans Nuclear hormo... 28 7.8
>Z82069-1|CAB04902.1| 667|Caenorhabditis elegans Hypothetical
protein W04A8.1 protein.
Length = 667
Score = 35.1 bits (77), Expect = 0.068
Identities = 22/77 (28%), Positives = 37/77 (48%)
Frame = +1
Query: 319 KLVARRSSDDCDELQDEIEKLRENLKEKQNELFQLQRNSYKHKSSPVKKKSEQFVRPQKI 498
+L R DD D + D L+ +K L + +N SP++KK + VR K+
Sbjct: 454 QLQKRHEEDDDDFISDVSAFLQRKTMKKSRNLGENSKNEVIFTGSPIEKKLKTIVRRFKM 513
Query: 499 VLTNSIDSLKRNLELMS 549
++ ID +R L ++S
Sbjct: 514 TISTEIDE-ERTLCVVS 529
>Z81586-5|CAB04696.1| 484|Caenorhabditis elegans Hypothetical
protein T05F1.7 protein.
Length = 484
Score = 33.5 bits (73), Expect = 0.21
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Frame = +1
Query: 313 QTKLVARRSSDDCDELQDEIEKLRENLKEKQNEL--FQLQR--NSYKHKSSPVKKKSEQF 480
Q KL R+ DE+ + + R + +KQNE+ F++ R NS K K KKK ++
Sbjct: 84 QEKLPQRQKQ--IDEILRALNEKRREVLQKQNEIAGFRVNRTENSMKSKMEKAKKKLDE- 140
Query: 481 VRPQKIVLTNSIDSLKRNL 537
++ +KIV I L+ ++
Sbjct: 141 MKKKKIVQDKKISRLRSDI 159
>Z81516-7|CAB04207.1| 1377|Caenorhabditis elegans Hypothetical
protein F26H9.8 protein.
Length = 1377
Score = 31.9 bits (69), Expect = 0.63
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +1
Query: 355 ELQDEIEKLRENLKEKQNELFQLQRNSYKHKSSPV--KKKSEQFVRPQKIVL 504
ELQ+E+E LRENL EKQ E+ L++ K K KS +R +I+L
Sbjct: 260 ELQNELESLRENL-EKQGEIVPLKQWQLKDLGFKTCQKLKSLTEIREMEILL 310
>Z81467-6|CAB03874.1| 1377|Caenorhabditis elegans Hypothetical
protein F26H9.8 protein.
Length = 1377
Score = 31.9 bits (69), Expect = 0.63
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +1
Query: 355 ELQDEIEKLRENLKEKQNELFQLQRNSYKHKSSPV--KKKSEQFVRPQKIVL 504
ELQ+E+E LRENL EKQ E+ L++ K K KS +R +I+L
Sbjct: 260 ELQNELESLRENL-EKQGEIVPLKQWQLKDLGFKTCQKLKSLTEIREMEILL 310
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical
protein T10G3.5b protein.
Length = 1203
Score = 31.9 bits (69), Expect = 0.63
Identities = 25/100 (25%), Positives = 48/100 (48%)
Frame = +1
Query: 292 TKITKLFQTKLVARRSSDDCDELQDEIEKLRENLKEKQNELFQLQRNSYKHKSSPVKKKS 471
TK ++L + K S+ +EL+ ++EK+ + EKQ E+ L + K + K K
Sbjct: 678 TKESELSELKGKLTESNSFIEELKVQVEKVSNEISEKQQEVENLMA-EMRDKEAHWKTKR 736
Query: 472 EQFVRPQKIVLTNSIDSLKRNLELMSILTGMEVQSYVVGE 591
++F + +L N D+ + + L S+ + + GE
Sbjct: 737 DEF---EAQMLRNQEDNEEASSTLKSVQEQLMKEKETSGE 773
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical
protein T10G3.5a protein.
Length = 1205
Score = 31.9 bits (69), Expect = 0.63
Identities = 25/100 (25%), Positives = 48/100 (48%)
Frame = +1
Query: 292 TKITKLFQTKLVARRSSDDCDELQDEIEKLRENLKEKQNELFQLQRNSYKHKSSPVKKKS 471
TK ++L + K S+ +EL+ ++EK+ + EKQ E+ L + K + K K
Sbjct: 680 TKESELSELKGKLTESNSFIEELKVQVEKVSNEISEKQQEVENLMA-EMRDKEAHWKTKR 738
Query: 472 EQFVRPQKIVLTNSIDSLKRNLELMSILTGMEVQSYVVGE 591
++F + +L N D+ + + L S+ + + GE
Sbjct: 739 DEF---EAQMLRNQEDNEEASSTLKSVQEQLMKEKETSGE 775
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 31.9 bits (69), Expect = 0.63
Identities = 25/100 (25%), Positives = 48/100 (48%)
Frame = +1
Query: 292 TKITKLFQTKLVARRSSDDCDELQDEIEKLRENLKEKQNELFQLQRNSYKHKSSPVKKKS 471
TK ++L + K S+ +EL+ ++EK+ + EKQ E+ L + K + K K
Sbjct: 680 TKESELSELKGKLTESNSFIEELKVQVEKVSNEISEKQQEVENLMA-EMRDKEAHWKTKR 738
Query: 472 EQFVRPQKIVLTNSIDSLKRNLELMSILTGMEVQSYVVGE 591
++F + +L N D+ + + L S+ + + GE
Sbjct: 739 DEF---EAQMLRNQEDNEEASSTLKSVQEQLMKEKETSGE 775
>U50135-2|AAM98043.1| 1584|Caenorhabditis elegans Uncoordinated
protein 104, isoforma protein.
Length = 1584
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 355 ELQDEIEKLRENLKEKQNELFQLQRNSYKHKSSP 456
EL +E+ KLR LK+K ++ +Q KHK P
Sbjct: 364 ELNEEVIKLRHILKDKGIDVTDVQETPGKHKKGP 397
>U50135-1|AAM98044.2| 1628|Caenorhabditis elegans Uncoordinated
protein 104, isoformb protein.
Length = 1628
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 355 ELQDEIEKLRENLKEKQNELFQLQRNSYKHKSSP 456
EL +E+ KLR LK+K ++ +Q KHK P
Sbjct: 364 ELNEEVIKLRHILKDKGIDVTDVQETPGKHKKGP 397
>M58582-1|AAA03517.1| 1584|Caenorhabditis elegans kinesin-related
protein protein.
Length = 1584
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 355 ELQDEIEKLRENLKEKQNELFQLQRNSYKHKSSP 456
EL +E+ KLR LK+K ++ +Q KHK P
Sbjct: 364 ELNEEVIKLRHILKDKGIDVTDVQETPGKHKKGP 397
>Z77659-8|CAB01170.1| 958|Caenorhabditis elegans Hypothetical
protein F23B12.8 protein.
Length = 958
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/83 (22%), Positives = 40/83 (48%)
Frame = +1
Query: 343 DDCDELQDEIEKLRENLKEKQNELFQLQRNSYKHKSSPVKKKSEQFVRPQKIVLTNSIDS 522
D DE++ ++ E++K + L Q +SY+ +++ KK E VR + +S+ +
Sbjct: 637 DKLDEVKKQVSDFTEDMKPLVSTLHQTTCDSYEARTNESKKNVEH-VRAACSSMADSMKA 695
Query: 523 LKRNLELMSILTGMEVQSYVVGE 591
L +E +S + V+ +
Sbjct: 696 LMLQVEQLSTKVAENHEKQVIAD 718
>Z77657-11|CAB01153.1| 958|Caenorhabditis elegans Hypothetical
protein F23B12.8 protein.
Length = 958
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/83 (22%), Positives = 40/83 (48%)
Frame = +1
Query: 343 DDCDELQDEIEKLRENLKEKQNELFQLQRNSYKHKSSPVKKKSEQFVRPQKIVLTNSIDS 522
D DE++ ++ E++K + L Q +SY+ +++ KK E VR + +S+ +
Sbjct: 637 DKLDEVKKQVSDFTEDMKPLVSTLHQTTCDSYEARTNESKKNVEH-VRAACSSMADSMKA 695
Query: 523 LKRNLELMSILTGMEVQSYVVGE 591
L +E +S + V+ +
Sbjct: 696 LMLQVEQLSTKVAENHEKQVIAD 718
>U53344-3|AAA96224.1| 702|Caenorhabditis elegans Hypothetical
protein T07H6.4 protein.
Length = 702
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +1
Query: 445 KSSPVKKKSEQFVRPQKIVLTNSIDSLKRNLELMSI---LTGMEVQSYVVGEHCCVVY 609
KS P+ + + + QK+ +T + LKR + + LT ++ Y+V +CC V+
Sbjct: 431 KSLPLTVRIRRSGQRQKLEITMILTDLKRKMPTSNWPDKLTSRSIEPYIVRRNCCSVF 488
>AF295093-1|AAG03081.1| 958|Caenorhabditis elegans bimC kinesin
BMK-1 protein.
Length = 958
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/83 (22%), Positives = 40/83 (48%)
Frame = +1
Query: 343 DDCDELQDEIEKLRENLKEKQNELFQLQRNSYKHKSSPVKKKSEQFVRPQKIVLTNSIDS 522
D DE++ ++ E++K + L Q +SY+ +++ KK E VR + +S+ +
Sbjct: 637 DKLDEVKKQVSDFTEDMKPLVSTLHQTTCDSYEARTNESKKNVEH-VRAACSSMADSMKA 695
Query: 523 LKRNLELMSILTGMEVQSYVVGE 591
L +E +S + V+ +
Sbjct: 696 LMLQVEQLSTKVAENHEKQVIAD 718
>AB024428-1|BAC19818.1| 958|Caenorhabditis elegans kinesin like
protein KLP-14 protein.
Length = 958
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/83 (22%), Positives = 40/83 (48%)
Frame = +1
Query: 343 DDCDELQDEIEKLRENLKEKQNELFQLQRNSYKHKSSPVKKKSEQFVRPQKIVLTNSIDS 522
D DE++ ++ E++K + L Q +SY+ +++ KK E VR + +S+ +
Sbjct: 637 DKLDEVKKQVSDFTEDMKPLVSTLHQTTCDSYEARTNESKKNVEH-VRAACSSMADSMKA 695
Query: 523 LKRNLELMSILTGMEVQSYVVGE 591
L +E +S + V+ +
Sbjct: 696 LMLQVEQLSTKVAENHEKQVIAD 718
>Z81496-1|CAB04067.1| 226|Caenorhabditis elegans Hypothetical
protein F09C6.1 protein.
Length = 226
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +1
Query: 463 KKSEQFVRPQKIVLTNSIDSLKRNLELMSIL 555
K SE+ R QK++LT + KR +EL+++L
Sbjct: 42 KDSEEVARLQKLILTQNEAESKRTMELLALL 72
>Z69787-10|CAH65466.1| 398|Caenorhabditis elegans Hypothetical
protein C44C10.11 protein.
Length = 398
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +1
Query: 283 MKQTKITKLFQTKLVARRSSDDCDELQDEIEKLRENLKEKQN-ELFQLQRNSYKHK 447
MK T+ITKL + D EL +E L+E LK+K + E + KH+
Sbjct: 293 MKTTQITKLENDVKLNGNFMDHISELTEENHNLKEQLKQKTDAETKMIAEMKKKHR 348
>Z30423-1|CAA83003.1| 1681|Caenorhabditis elegans Hypothetical protein
T20G5.1 protein.
Length = 1681
Score = 29.9 bits (64), Expect = 2.6
Identities = 24/86 (27%), Positives = 40/86 (46%)
Frame = +1
Query: 490 QKIVLTNSIDSLKRNLELMSILTGMEVQSYVVGEHCCVVYHMQHDSDNVVKHGLRIEMQA 669
+KIVL NS S RNL+ + ILT M V E+ + +D+ ++ + E+
Sbjct: 1011 EKIVLDNSAFSEHRNLQNLLILTAMRADRTRVMEY--IQKLDNYDAPDIANIAITSELYE 1068
Query: 670 GANVVPKSSLPLGFNINAVMEEYDNI 747
A + K IN ++E +N+
Sbjct: 1069 EAFAIFKKFDVNSSAINVLIENVNNL 1094
>AL021492-4|CAA16384.1| 492|Caenorhabditis elegans Hypothetical
protein Y45F10D.9 protein.
Length = 492
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/61 (27%), Positives = 34/61 (55%)
Frame = +1
Query: 352 DELQDEIEKLRENLKEKQNELFQLQRNSYKHKSSPVKKKSEQFVRPQKIVLTNSIDSLKR 531
+E Q+E+E + L+E+Q ++ QLQ+ + H+ K ++E + + + + LKR
Sbjct: 271 EENQEELEIVGNMLREEQGKVDQLQKRNVAHQKEIGKLRAELGTAQRNLEKADQL--LKR 328
Query: 532 N 534
N
Sbjct: 329 N 329
>Z92793-2|CAD56589.1| 684|Caenorhabditis elegans Hypothetical
protein C26C6.5b protein.
Length = 684
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/67 (23%), Positives = 35/67 (52%)
Frame = +1
Query: 313 QTKLVARRSSDDCDELQDEIEKLRENLKEKQNELFQLQRNSYKHKSSPVKKKSEQFVRPQ 492
Q ++A+++ +L ++ + +KQ EL + N+ +SP ++S+Q +PQ
Sbjct: 297 QAYIMAKKNPAQTTQLFQQLITINNQNLQKQKELSAAETNA-SASASPAVQQSQQAQQPQ 355
Query: 493 KIVLTNS 513
+ +T S
Sbjct: 356 QAQITQS 362
>Z92793-1|CAB07229.1| 681|Caenorhabditis elegans Hypothetical
protein C26C6.5a protein.
Length = 681
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/67 (23%), Positives = 35/67 (52%)
Frame = +1
Query: 313 QTKLVARRSSDDCDELQDEIEKLRENLKEKQNELFQLQRNSYKHKSSPVKKKSEQFVRPQ 492
Q ++A+++ +L ++ + +KQ EL + N+ +SP ++S+Q +PQ
Sbjct: 297 QAYIMAKKNPAQTTQLFQQLITINNQNLQKQKELSAAETNA-SASASPAVQQSQQAQQPQ 355
Query: 493 KIVLTNS 513
+ +T S
Sbjct: 356 QAQITQS 362
>Z72503-11|CAD56560.1| 684|Caenorhabditis elegans Hypothetical
protein C26C6.5b protein.
Length = 684
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/67 (23%), Positives = 35/67 (52%)
Frame = +1
Query: 313 QTKLVARRSSDDCDELQDEIEKLRENLKEKQNELFQLQRNSYKHKSSPVKKKSEQFVRPQ 492
Q ++A+++ +L ++ + +KQ EL + N+ +SP ++S+Q +PQ
Sbjct: 297 QAYIMAKKNPAQTTQLFQQLITINNQNLQKQKELSAAETNA-SASASPAVQQSQQAQQPQ 355
Query: 493 KIVLTNS 513
+ +T S
Sbjct: 356 QAQITQS 362
>Z72503-10|CAA96601.1| 681|Caenorhabditis elegans Hypothetical
protein C26C6.5a protein.
Length = 681
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/67 (23%), Positives = 35/67 (52%)
Frame = +1
Query: 313 QTKLVARRSSDDCDELQDEIEKLRENLKEKQNELFQLQRNSYKHKSSPVKKKSEQFVRPQ 492
Q ++A+++ +L ++ + +KQ EL + N+ +SP ++S+Q +PQ
Sbjct: 297 QAYIMAKKNPAQTTQLFQQLITINNQNLQKQKELSAAETNA-SASASPAVQQSQQAQQPQ 355
Query: 493 KIVLTNS 513
+ +T S
Sbjct: 356 QAQITQS 362
>Z68161-9|CAA92298.2| 688|Caenorhabditis elegans Hypothetical
protein F20C5.5 protein.
Length = 688
Score = 29.5 bits (63), Expect = 3.4
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 7/57 (12%)
Frame = +1
Query: 349 CDELQDEIEKLRENLKEKQ--NELFQLQRNS-----YKHKSSPVKKKSEQFVRPQKI 498
CD ++ +IEKL EN+KE+Q E+ +R Y K KK SEQF Q++
Sbjct: 570 CDYVR-KIEKLEENVKEEQMNTEMIMKERTREITELYYQKRVLEKKISEQFKEIQQV 625
>Z50070-8|CAA90397.1| 263|Caenorhabditis elegans Hypothetical
protein F43G6.8 protein.
Length = 263
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/60 (20%), Positives = 32/60 (53%)
Frame = +1
Query: 337 SSDDCDELQDEIEKLRENLKEKQNELFQLQRNSYKHKSSPVKKKSEQFVRPQKIVLTNSI 516
+ +D DELQD++++ N ++ ++ + +++ K+ ++K F R + + L +
Sbjct: 123 TEEDRDELQDKLDEEAANYRDLEDRIKEVRHRDRYMKTVETERKRTTFYRKKMLELAEQL 182
>Z99280-6|CAB16502.1| 418|Caenorhabditis elegans Hypothetical
protein Y57G11B.1 protein.
Length = 418
Score = 29.1 bits (62), Expect = 4.5
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 367 EIEKLRENLKEKQNELFQLQR-NSYKHKSSPVKKKSEQFVRPQKIVLTNSIDSLKRNLEL 543
E EK+ EN+K N L +QR N+ KH S ++ E +K+ +DS+K +EL
Sbjct: 234 EHEKISENMKNAFNALLNVQRENNAKHLVSNFQQLFEPVEDVKKL-----LDSVKIKIEL 288
Query: 544 M 546
+
Sbjct: 289 V 289
>Z96047-2|CAB09411.1| 566|Caenorhabditis elegans Hypothetical
protein DY3.2 protein.
Length = 566
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/53 (26%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +1
Query: 328 ARRSSDDCD-ELQDEIEKLRENLKEKQNELFQLQRNSYKHKSSPVKKKSEQFV 483
A++ +D+ +LQD+IE++R K ++ ++YK+K + +++ E+ V
Sbjct: 244 AKQINDEYQSKLQDQIEEMRAQFKNNLHQNKTAFEDAYKNKLNAARERQEEAV 296
>Z82284-9|CAB05295.1| 418|Caenorhabditis elegans Hypothetical
protein Y57G11B.1 protein.
Length = 418
Score = 29.1 bits (62), Expect = 4.5
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 367 EIEKLRENLKEKQNELFQLQR-NSYKHKSSPVKKKSEQFVRPQKIVLTNSIDSLKRNLEL 543
E EK+ EN+K N L +QR N+ KH S ++ E +K+ +DS+K +EL
Sbjct: 234 EHEKISENMKNAFNALLNVQRENNAKHLVSNFQQLFEPVEDVKKL-----LDSVKIKIEL 288
Query: 544 M 546
+
Sbjct: 289 V 289
>Z81513-2|CAB04186.2| 489|Caenorhabditis elegans Hypothetical
protein F26D2.2 protein.
Length = 489
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/70 (20%), Positives = 41/70 (58%), Gaps = 6/70 (8%)
Frame = +1
Query: 361 QDEIEKLRENLKEKQNELFQLQRNSYKHKSSPVKKKSEQF------VRPQKIVLTNSIDS 522
++++E++RE+ +++LFQ + + + K++ ++K+ E+ VR + L S+
Sbjct: 215 EEKLEQMREDCVTLRSQLFQFEASRSQDKTTEIEKEIEKITAETAKVRVENEQLKASLSK 274
Query: 523 LKRNLELMSI 552
+K + +++ +
Sbjct: 275 IKEDTKILKL 284
>Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical
protein T06E4.1 protein.
Length = 1295
Score = 29.1 bits (62), Expect = 4.5
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Frame = +1
Query: 358 LQDEIEKLRENLKEKQ-NELFQLQRNSYKHKSSPVKKKSEQFVRPQKIV--------LTN 510
+Q++ +KLR+ LKE+Q +L L+ S + + E++ K++ L +
Sbjct: 618 VQEDCQKLRDQLKEEQIQQLVSLRETSEVMHQESARHQEEKYQIQSKLMSTEAEVIELRS 677
Query: 511 SIDSLKRNLELMS 549
SIDSL+ + + S
Sbjct: 678 SIDSLQAEVRVQS 690
>Z50109-1|CAA90433.3| 142|Caenorhabditis elegans Hypothetical
protein C09H10.1 protein.
Length = 142
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/59 (27%), Positives = 33/59 (55%)
Frame = +1
Query: 328 ARRSSDDCDELQDEIEKLRENLKEKQNELFQLQRNSYKHKSSPVKKKSEQFVRPQKIVL 504
A S DD + Q+E++KL+ + + + E+ + ++ + K K V+KK + + Q + L
Sbjct: 79 APMSKDDLKKAQEELDKLKWDNIQMEMEIEKFKKENLK-KQLEVEKKKREMLDEQLVQL 136
>X74027-1|CAA52188.1| 566|Caenorhabditis elegans lamin protein.
Length = 566
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/53 (26%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +1
Query: 328 ARRSSDDCD-ELQDEIEKLRENLKEKQNELFQLQRNSYKHKSSPVKKKSEQFV 483
A++ +D+ +LQD+IE++R K ++ ++YK+K + +++ E+ V
Sbjct: 244 AKQINDEYQSKLQDQIEEMRAQFKNNLHQNKTAFEDAYKNKLNAARERQEEAV 296
>U80453-12|AAN63454.1| 419|Caenorhabditis elegans Hypothetical
protein C23H3.9c protein.
Length = 419
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +1
Query: 352 DELQDEIEKLRENLKEKQNELFQLQRNSYKHKSSPVKKKSEQFVRPQ 492
DEL+ +EK + L +++ + + Q+N HKSS ++F+ P+
Sbjct: 176 DELERLLEKALKKLSKREKKKKE-QKNRLPHKSSMNNNNGQRFLSPE 221
>AF515833-1|AAM55225.1| 489|Caenorhabditis elegans synaptonemal
complex protein SYP-1 protein.
Length = 489
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/70 (20%), Positives = 41/70 (58%), Gaps = 6/70 (8%)
Frame = +1
Query: 361 QDEIEKLRENLKEKQNELFQLQRNSYKHKSSPVKKKSEQF------VRPQKIVLTNSIDS 522
++++E++RE+ +++LFQ + + + K++ ++K+ E+ VR + L S+
Sbjct: 215 EEKLEQMREDCVTLRSQLFQFEASRSQDKTTEIEKEIEKITAETAKVRVENEQLKASLSK 274
Query: 523 LKRNLELMSI 552
+K + +++ +
Sbjct: 275 IKEDTKILKL 284
>U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 77 protein.
Length = 1004
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 331 RRSSDDCDELQDEIEKLRENLKEKQNELF 417
+R + DE+ ++ KLR+N K + N LF
Sbjct: 263 QRRQSNIDEIPSDVGKLRDNRKGRHNSLF 291
>U39645-5|AAU05591.1| 345|Caenorhabditis elegans Hypothetical
protein C14F11.4a protein.
Length = 345
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 295 KITKLFQTKLVARR-SSDDCDELQDEIEKLRENLKEKQNELFQLQRNSYKH 444
+I + + KLV+ + +D DEL I + R +++EK + QL +Y H
Sbjct: 145 QIQEGLRVKLVSSNIAGEDIDELLKVINETRRDMEEKIGNIKQLSDGNYIH 195
>U39645-4|AAU05592.1| 341|Caenorhabditis elegans Hypothetical
protein C14F11.4b protein.
Length = 341
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 295 KITKLFQTKLVARR-SSDDCDELQDEIEKLRENLKEKQNELFQLQRNSYKH 444
+I + + KLV+ + +D DEL I + R +++EK + QL +Y H
Sbjct: 141 QIQEGLRVKLVSSNIAGEDIDELLKVINETRRDMEEKIGNIKQLSDGNYIH 191
>U13876-2|AAM48539.1| 373|Caenorhabditis elegans Hypothetical
protein F57B9.7b protein.
Length = 373
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/44 (29%), Positives = 28/44 (63%)
Frame = +1
Query: 346 DCDELQDEIEKLRENLKEKQNELFQLQRNSYKHKSSPVKKKSEQ 477
+ DEL+ ++ + ++ L++K+N L + Q+ + KH S ++K Q
Sbjct: 325 ELDELKTQMRQTKKELRDKENALDE-QKETNKHLQSRLEKMRMQ 367
>U13876-1|AAM48538.1| 353|Caenorhabditis elegans Hypothetical
protein F57B9.7a protein.
Length = 353
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/44 (29%), Positives = 28/44 (63%)
Frame = +1
Query: 346 DCDELQDEIEKLRENLKEKQNELFQLQRNSYKHKSSPVKKKSEQ 477
+ DEL+ ++ + ++ L++K+N L + Q+ + KH S ++K Q
Sbjct: 305 ELDELKTQMRQTKKELRDKENALDE-QKETNKHLQSRLEKMRMQ 347
>AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical
protein F54G2.2 protein.
Length = 1023
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/40 (32%), Positives = 26/40 (65%)
Frame = +1
Query: 304 KLFQTKLVARRSSDDCDELQDEIEKLRENLKEKQNELFQL 423
+L +TK + + D+C +LQ EI ++RE + ++ +L +L
Sbjct: 155 ELTETKNFLQANMDNCQKLQQEITQMREYNRAQEIQLKKL 194
>AF000261-9|AAB52923.3| 200|Caenorhabditis elegans Hypothetical
protein F19B10.2 protein.
Length = 200
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/53 (28%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Frame = +1
Query: 286 KQTKITKLFQTKLVARRSSDDCD---ELQDEIEKLRENLKEKQNELFQLQRNS 435
K+ + ++ + LV + S+ C ++ + EKL+ L E +N++F+L+ NS
Sbjct: 121 KKGEAARVTWSTLVQKLMSEACQRETKMLEANEKLKAELAELRNQMFELEANS 173
>Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical
protein C11G6.3 protein.
Length = 385
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 355 ELQDEIEKLRENLKEKQNELFQLQRNSYKHKSSPVKKKSEQFVRPQK 495
E + E EK RE +EK+ E Q +R + K +KK E+ R +K
Sbjct: 233 EREKEREKEREKEREKEREK-QKEREKEREKEREKEKKREEEARRKK 278
>Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +1
Query: 340 SDDCDELQDEIEKLRENLKEKQNELFQLQRNSYKHKSSPVKKKSEQFVRPQK 495
S++ ++ Q EIE + LK+ ++++ L+ K K+S K+K E QK
Sbjct: 764 SEEYEKNQAEIEATVKTLKDVEDKIKTLESMKNKDKNSQEKRKKELTALLQK 815
>Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +1
Query: 340 SDDCDELQDEIEKLRENLKEKQNELFQLQRNSYKHKSSPVKKKSEQFVRPQK 495
S++ ++ Q EIE + LK+ ++++ L+ K K+S K+K E QK
Sbjct: 764 SEEYEKNQAEIEATVKTLKDVEDKIKTLESMKNKDKNSQEKRKKELTALLQK 815
>U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromosome
and X-chromosomeassociated MIX-1 protein protein.
Length = 1244
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +1
Query: 340 SDDCDELQDEIEKLRENLKEKQNELFQLQRNSYKHKSSPVKKKSEQFVRPQK 495
S++ ++ Q EIE + LK+ ++++ L+ K K+S K+K E QK
Sbjct: 764 SEEYEKNQAEIEATVKTLKDVEDKIKTLESMKNKDKNSQEKRKKELTALLQK 815
>U00066-1|AAA50742.1| 490|Caenorhabditis elegans High incidence of
males (increasedx chromosome loss) protein 10 protein.
Length = 490
Score = 28.3 bits (60), Expect = 7.8
Identities = 24/103 (23%), Positives = 43/103 (41%), Gaps = 2/103 (1%)
Frame = +1
Query: 286 KQTKITKLFQTKLVARRSSDDCDELQDEIEKLRE--NLKEKQNELFQLQRNSYKHKSSPV 459
+Q +I ++ T+ +A + D Q+ +K +E LK +E NS + +
Sbjct: 364 RQRRIEEI--TEQIANLKTSQPDVSQEIAKKKQELLALKNAHSETISQITNSCQDAVAKF 421
Query: 460 KKKSEQFVRPQKIVLTNSIDSLKRNLELMSILTGMEVQSYVVG 588
K + F QK+ + + + L S LTG + Y G
Sbjct: 422 AKLNAMFKETQKVAFEKNTAAAREMERLKSSLTGRLLSDYTFG 464
>AY204190-1|AAO39194.1| 382|Caenorhabditis elegans nuclear receptor
NHR-106 protein.
Length = 382
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/41 (31%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Frame = +1
Query: 454 PVKKKSEQFV-RPQKIVLTNSIDSLKRNLELMSILT-GMEV 570
P+ + E FV RP I+ TN+ D + +++ +++T G+E+
Sbjct: 81 PISQSLEIFVSRPNLILFTNNYDKTRNYIDVSNLITRGLEI 121
>AL132862-2|CAB70224.1| 1019|Caenorhabditis elegans Hypothetical
protein Y73F8A.5 protein.
Length = 1019
Score = 28.3 bits (60), Expect = 7.8
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Frame = +1
Query: 469 SEQFVRPQKIVLTNSIDSLKRNLELMSILTGMEVQSYVVGEHCCVVYHMQHDSDNVVKHG 648
S VRP + T + R L + + + QSY + + + + D K+G
Sbjct: 160 SANLVRPGSVEFTYRMPRNNRALSMQVDIRNEQCQSYNDVAKSMFLKYTKKEKDEEEKNG 219
Query: 649 ----LRIEMQAGANVV 684
RIE+++GANV+
Sbjct: 220 DWRKRRIELKSGANVI 235
>AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +1
Query: 340 SDDCDELQDEIEKLRENLKEKQNELFQLQRNSYKHKSSPVKKKSEQFVRPQK 495
S++ ++ Q EIE + LK+ ++++ L+ K K+S K+K E QK
Sbjct: 764 SEEYEKNQAEIEATVKTLKDVEDKIKTLESMKNKDKNSQEKRKKELTALLQK 815
>AF022978-5|AAG24181.2| 382|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 106 protein.
Length = 382
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/41 (31%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Frame = +1
Query: 454 PVKKKSEQFV-RPQKIVLTNSIDSLKRNLELMSILT-GMEV 570
P+ + E FV RP I+ TN+ D + +++ +++T G+E+
Sbjct: 81 PISQSLEIFVSRPNLILFTNNYDKTRNYIDVSNLITRGLEI 121
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,038,667
Number of Sequences: 27780
Number of extensions: 277607
Number of successful extensions: 1152
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 1043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1149
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -