Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_H12
(857 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CU457741-13|CAM36354.1| 608|Caenorhabditis elegans Hypothetical... 35 0.065
CU457741-11|CAM36352.1| 609|Caenorhabditis elegans Hypothetical... 35 0.065
AF068201-1|AAC70927.1| 609|Caenorhabditis elegans aminopeptidas... 35 0.065
AF068200-1|AAC72891.1| 609|Caenorhabditis elegans aminopeptidas... 35 0.065
AF036701-2|AAB88369.2| 625|Caenorhabditis elegans Hypothetical ... 33 0.20
>CU457741-13|CAM36354.1| 608|Caenorhabditis elegans Hypothetical
protein C42C1.11c protein.
Length = 608
Score = 35.1 bits (77), Expect = 0.065
Identities = 31/172 (18%), Positives = 48/172 (27%), Gaps = 1/172 (0%)
Frame = -1
Query: 704 ESLXTXEFRAYXFXYFQDNXKX-KXXDWXXWLXKXGMPPXIPXXDXXMXXPXTXXVXXXN 528
+++ T E++ Y + F D DW WL K G+PP M
Sbjct: 420 KTVSTEEWKEYLYDSFTDKKVILDNIDWNLWLHKAGLPPKPKYDSTPMQACKDLAAKWTT 479
Query: 527 XGXXXXXFXXXXXXXXPHXXXXXLXELXKXPPLPVDXXHXFGAXXXIDXXXXTXXLYRWX 348
G L + + D A +D + W
Sbjct: 480 EGSEAPTDGEVFAKMSNSQKLAVLDAVRVNKTMFGDRMPALTATYKLDQAKNAELKFSWL 539
Query: 347 RXXXRSXDXXILGXVFXFXXXIGRXRXVRPXYXDLXXWGDVXNXAXGXFLQN 192
+ I+ F +GR + +P Y L W + A F N
Sbjct: 540 MLGLETKWSPIVDASLAFALAVGRMKYCKPIYRSLFGWSATRDRAISQFKAN 591
>CU457741-11|CAM36352.1| 609|Caenorhabditis elegans Hypothetical
protein C42C1.11a protein.
Length = 609
Score = 35.1 bits (77), Expect = 0.065
Identities = 31/172 (18%), Positives = 48/172 (27%), Gaps = 1/172 (0%)
Frame = -1
Query: 704 ESLXTXEFRAYXFXYFQDNXKX-KXXDWXXWLXKXGMPPXIPXXDXXMXXPXTXXVXXXN 528
+++ T E++ Y + F D DW WL K G+PP M
Sbjct: 421 KTVSTEEWKEYLYDSFTDKKVILDNIDWNLWLHKAGLPPKPKYDSTPMQACKDLAAKWTT 480
Query: 527 XGXXXXXFXXXXXXXXPHXXXXXLXELXKXPPLPVDXXHXFGAXXXIDXXXXTXXLYRWX 348
G L + + D A +D + W
Sbjct: 481 EGSEAPTDGEVFAKMSNSQKLAVLDAVRVNKTMFGDRMPALTATYKLDQAKNAELKFSWL 540
Query: 347 RXXXRSXDXXILGXVFXFXXXIGRXRXVRPXYXDLXXWGDVXNXAXGXFLQN 192
+ I+ F +GR + +P Y L W + A F N
Sbjct: 541 MLGLETKWSPIVDASLAFALAVGRMKYCKPIYRSLFGWSATRDRAISQFKAN 592
>AF068201-1|AAC70927.1| 609|Caenorhabditis elegans aminopeptidase-1
protein.
Length = 609
Score = 35.1 bits (77), Expect = 0.065
Identities = 31/172 (18%), Positives = 48/172 (27%), Gaps = 1/172 (0%)
Frame = -1
Query: 704 ESLXTXEFRAYXFXYFQDNXKX-KXXDWXXWLXKXGMPPXIPXXDXXMXXPXTXXVXXXN 528
+++ T E++ Y + F D DW WL K G+PP M
Sbjct: 421 KTVSTEEWKEYLYDSFTDKKVILDNIDWNLWLHKAGLPPKPKYDSTPMQACKDLAAKWTT 480
Query: 527 XGXXXXXFXXXXXXXXPHXXXXXLXELXKXPPLPVDXXHXFGAXXXIDXXXXTXXLYRWX 348
G L + + D A +D + W
Sbjct: 481 EGSEAPTDGEVFAKMSNSQKLAVLDAVRVNKTMFGDRMPALTATYKLDQAKNAELKFSWL 540
Query: 347 RXXXRSXDXXILGXVFXFXXXIGRXRXVRPXYXDLXXWGDVXNXAXGXFLQN 192
+ I+ F +GR + +P Y L W + A F N
Sbjct: 541 MLGLETKWSPIVDASLAFALAVGRMKYCKPIYRSLFGWSATRDRAISQFKAN 592
>AF068200-1|AAC72891.1| 609|Caenorhabditis elegans aminopeptidase-1
protein.
Length = 609
Score = 35.1 bits (77), Expect = 0.065
Identities = 31/172 (18%), Positives = 48/172 (27%), Gaps = 1/172 (0%)
Frame = -1
Query: 704 ESLXTXEFRAYXFXYFQDNXKX-KXXDWXXWLXKXGMPPXIPXXDXXMXXPXTXXVXXXN 528
+++ T E++ Y + F D DW WL K G+PP M
Sbjct: 421 KTVSTEEWKEYLYDSFTDKKVILDNIDWNLWLHKAGLPPKPKYDSTPMQACKDLAAKWTT 480
Query: 527 XGXXXXXFXXXXXXXXPHXXXXXLXELXKXPPLPVDXXHXFGAXXXIDXXXXTXXLYRWX 348
G L + + D A +D + W
Sbjct: 481 EGSEAPTDGEVFAKMSNSQKLAVLDAVRVNKTMFGDRMPALTATYKLDQAKNAELKFSWL 540
Query: 347 RXXXRSXDXXILGXVFXFXXXIGRXRXVRPXYXDLXXWGDVXNXAXGXFLQN 192
+ I+ F +GR + +P Y L W + A F N
Sbjct: 541 MLGLETKWSPIVDASLAFALAVGRMKYCKPIYRSLFGWSATRDRAISQFKAN 592
>AF036701-2|AAB88369.2| 625|Caenorhabditis elegans Hypothetical
protein ZC416.6 protein.
Length = 625
Score = 33.5 bits (73), Expect = 0.20
Identities = 34/193 (17%), Positives = 59/193 (30%), Gaps = 5/193 (2%)
Frame = -1
Query: 704 ESLXTXEFRAYXFXYFQDNXKX-KXXDWXXWLXKXGMPPXIPXXDXXMXXPXTXXVXXX- 531
+++ + +++ + + YF D + ++ W GMPP P M +
Sbjct: 423 QAIDSWQWKDHLYKYFADQKEVLDTVNFDLWFNGVGMPPEKPNYGQSMVEACEVLLKKWL 482
Query: 530 --NXGXXXXXFXXXXXXXXPHXXXXXLXELXKX-PPLPVDXXHXFGAXXXIDXXXXTXXL 360
+ P L +L + PP+ ++ + L
Sbjct: 483 AADESTVGDITSEDYYAMQPLQQIELLSQLWQHDPPIEHYKLDALNKLYKLNDSQNSELL 542
Query: 359 YRWXRXXXRSXDXXILGXVFXFXXXIGRXRXVRPXYXDLXXWGDVXNXAXGXFLQNGXXX 180
W R +S + F GR + RP Y DL W A +L+
Sbjct: 543 LNWLRLCIKSKWEECIPKALDFVNSQGRLKFCRPIYRDLAQWPIANKKARDVYLKGRSQM 602
Query: 179 XXXXGXTXEKDLH 141
KDLH
Sbjct: 603 HPITAEMIAKDLH 615
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,711,879
Number of Sequences: 27780
Number of extensions: 47365
Number of successful extensions: 27
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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