Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_H06
         (922 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ431181-1|ABD92773.1|  295|Homo sapiens FAM110A protein.              31   7.8  
BC022238-1|AAH22238.1|  295|Homo sapiens family with sequence si...    31   7.8  
BC012800-1|AAH12800.1|  295|Homo sapiens FAM110A protein protein.      31   7.8  
BC004222-1|AAH04222.1|  295|Homo sapiens family with sequence si...    31   7.8  
AL118502-4|CAC28879.1|  295|Homo sapiens chromosome 20 open read...    31   7.8  
AB196290-1|BAD77807.1|  295|Homo sapiens hypothetical protein pr...    31   7.8  

>DQ431181-1|ABD92773.1|  295|Homo sapiens FAM110A protein.
          Length = 295

 Score = 30.7 bits (66), Expect = 7.8
 Identities = 17/41 (41%), Positives = 19/41 (46%)
 Frame = +3

Query: 693 VSPGGXSLXALSCPXPCRXPGYLPAFPPXGPAWRXLIXHRL 815
           +SPG  S  AL C    R PGYL   P  G A +     RL
Sbjct: 6   LSPGAPSAPALPCRLRTRVPGYLLRGPADGGARKPSAVERL 46


>BC022238-1|AAH22238.1|  295|Homo sapiens family with sequence
           similarity 110, member A protein.
          Length = 295

 Score = 30.7 bits (66), Expect = 7.8
 Identities = 17/41 (41%), Positives = 19/41 (46%)
 Frame = +3

Query: 693 VSPGGXSLXALSCPXPCRXPGYLPAFPPXGPAWRXLIXHRL 815
           +SPG  S  AL C    R PGYL   P  G A +     RL
Sbjct: 6   LSPGAPSAPALPCRLRTRVPGYLLRGPADGGARKPSAVERL 46


>BC012800-1|AAH12800.1|  295|Homo sapiens FAM110A protein protein.
          Length = 295

 Score = 30.7 bits (66), Expect = 7.8
 Identities = 17/41 (41%), Positives = 19/41 (46%)
 Frame = +3

Query: 693 VSPGGXSLXALSCPXPCRXPGYLPAFPPXGPAWRXLIXHRL 815
           +SPG  S  AL C    R PGYL   P  G A +     RL
Sbjct: 6   LSPGAPSAPALPCRLRTRVPGYLLRGPADGGARKPSAVERL 46


>BC004222-1|AAH04222.1|  295|Homo sapiens family with sequence
           similarity 110, member A protein.
          Length = 295

 Score = 30.7 bits (66), Expect = 7.8
 Identities = 17/41 (41%), Positives = 19/41 (46%)
 Frame = +3

Query: 693 VSPGGXSLXALSCPXPCRXPGYLPAFPPXGPAWRXLIXHRL 815
           +SPG  S  AL C    R PGYL   P  G A +     RL
Sbjct: 6   LSPGAPSAPALPCRLRTRVPGYLLRGPADGGARKPSAVERL 46


>AL118502-4|CAC28879.1|  295|Homo sapiens chromosome 20 open reading
           frame 55 protein.
          Length = 295

 Score = 30.7 bits (66), Expect = 7.8
 Identities = 17/41 (41%), Positives = 19/41 (46%)
 Frame = +3

Query: 693 VSPGGXSLXALSCPXPCRXPGYLPAFPPXGPAWRXLIXHRL 815
           +SPG  S  AL C    R PGYL   P  G A +     RL
Sbjct: 6   LSPGAPSAPALPCRLRTRVPGYLLRGPADGGARKPSAVERL 46


>AB196290-1|BAD77807.1|  295|Homo sapiens hypothetical protein
           protein.
          Length = 295

 Score = 30.7 bits (66), Expect = 7.8
 Identities = 17/41 (41%), Positives = 19/41 (46%)
 Frame = +3

Query: 693 VSPGGXSLXALSCPXPCRXPGYLPAFPPXGPAWRXLIXHRL 815
           +SPG  S  AL C    R PGYL   P  G A +     RL
Sbjct: 6   LSPGAPSAPALPCRLRTRVPGYLLRGPADGGARKPSAVERL 46


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,593,981
Number of Sequences: 237096
Number of extensions: 1112728
Number of successful extensions: 1911
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1910
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11992411152
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)