Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_H06
         (922 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003151-19|AAK18922.1|  988|Caenorhabditis elegans Hypothetical...    31   0.88 
Z81048-1|CAB02839.1|  587|Caenorhabditis elegans Hypothetical pr...    29   6.2  
AB033380-1|BAA92264.1|  587|Caenorhabditis elegans kinesin like ...    29   6.2  
AL132898-4|CAC14407.3|  968|Caenorhabditis elegans Hypothetical ...    28   8.2  

>AF003151-19|AAK18922.1|  988|Caenorhabditis elegans Hypothetical
           protein D1007.7 protein.
          Length = 988

 Score = 31.5 bits (68), Expect = 0.88
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +3

Query: 690 GVSPGGXSLXALSCPXPCRXPGYLPAFPPXG 782
           G+ PG   +  L+ P P   PGY PA PP G
Sbjct: 693 GLPPGVPPMFNLNAPPPPGIPGYPPAPPPPG 723


>Z81048-1|CAB02839.1|  587|Caenorhabditis elegans Hypothetical
           protein C41G7.2 protein.
          Length = 587

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +3

Query: 669 AXPIKIPGVS-PGGXSLXALSCPXPCRXPG 755
           A P  IP  S PGG ++ A +C  P R PG
Sbjct: 34  ADPATIPRQSAPGGITIGAAACRPPSRLPG 63


>AB033380-1|BAA92264.1|  587|Caenorhabditis elegans kinesin like
           protein protein.
          Length = 587

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +3

Query: 669 AXPIKIPGVS-PGGXSLXALSCPXPCRXPG 755
           A P  IP  S PGG ++ A +C  P R PG
Sbjct: 34  ADPATIPRQSAPGGITIGAAACRPPSRLPG 63


>AL132898-4|CAC14407.3|  968|Caenorhabditis elegans Hypothetical
           protein Y59A8B.6 protein.
          Length = 968

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 15/41 (36%), Positives = 17/41 (41%)
 Frame = +3

Query: 666 PAXPIKIPGVSPGGXSLXALSCPXPCRXPGYLPAFPPXGPA 788
           PA    +PGV  G       S   P R P  LP   P GP+
Sbjct: 21  PAPTGYVPGVGRGATGFTTRSDIGPARDPTELPEAGPVGPS 61


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,049,438
Number of Sequences: 27780
Number of extensions: 131775
Number of successful extensions: 196
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 196
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)