Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_H03
         (883 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0392 + 17500748-17500877,17501006-17501280,17501321-175013...    29   3.7  
01_06_0790 + 32019972-32020101,32020461-32020657,32020790-320209...    29   4.9  
08_01_0892 - 8778097-8778236,8778390-8778486,8778568-8778747,877...    28   8.6  
05_07_0289 + 29004842-29005213,29005318-29005605,29005707-290058...    28   8.6  
03_06_0071 + 31465707-31466237,31467455-31468075,31468438-314685...    28   8.6  

>10_08_0392 +
           17500748-17500877,17501006-17501280,17501321-17501388,
           17501516-17501632,17501802-17501943,17502622-17502912,
           17503507-17503650
          Length = 388

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 16/78 (20%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
 Frame = -1

Query: 394 FILSKCSLSICKQFRCFLIFDKASVIHFSSANN*VSSAIRLFN--LTADIFNIETLKNII 221
           FI+  CS+++C  F  FL+    S + +    +  +  I  F   L  D F    +  I+
Sbjct: 246 FIVLSCSIAVCVNFSTFLVIGTTSPVTYQVLGHLKTCLILSFGYVLLRDPFTFRNVAGIL 305

Query: 220 *FCYYQNYHNYYRILRKR 167
              +    ++++ +   R
Sbjct: 306 VAIFGMGLYSFFSVSESR 323


>01_06_0790 +
           32019972-32020101,32020461-32020657,32020790-32020993,
           32021444-32021645,32021798-32021886,32022567-32022662,
           32022710-32022814,32023516-32023556,32023685-32023777,
           32023853-32023970,32024488-32024578,32024693-32024766,
           32025008-32025187,32025643-32025681
          Length = 552

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +2

Query: 47  IAWHCIANCMSHAKQTDI 100
           ++WHC+ +CM H K+  +
Sbjct: 361 LSWHCLTHCMVHVKKVQL 378


>08_01_0892 -
           8778097-8778236,8778390-8778486,8778568-8778747,
           8779138-8779247,8781153-8781294,8782298-8782686,
           8782752-8782834,8783524-8785244,8785894-8786040,
           8786121-8786264,8786669-8786741,8787413-8787633
          Length = 1148

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = -1

Query: 409 SFNCDFILSKCSLSICKQFRCFLIFDKASVIHFSSANN*VSS 284
           SF C  + + CSLSIC++   FLI  +   + FSS    +SS
Sbjct: 829 SFVCVPVNTTCSLSICREILWFLIGTRE--VPFSSVKFGISS 868


>05_07_0289 +
           29004842-29005213,29005318-29005605,29005707-29005853,
           29005939-29006175,29006261-29006524,29006609-29006725,
           29006991-29007042,29007903-29008303,29008380-29008598,
           29008692-29008925
          Length = 776

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
 Frame = -1

Query: 145 LLTQITNIEV--GFQIEDICLFCMRHAICNAVPSNQILRIP 29
           L+T I   E   GF+I    LF +RH+I  A+  +   R P
Sbjct: 303 LITAIDRFEPKRGFRISTYALFWIRHSIVRAITLSNFTRFP 343


>03_06_0071 +
           31465707-31466237,31467455-31468075,31468438-31468520,
           31468895-31468979
          Length = 439

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 10/37 (27%), Positives = 23/37 (62%)
 Frame = -1

Query: 193 NYYRILRKRYPQNSVQLLTQITNIEVGFQIEDICLFC 83
           N   +L +R   ++V+LL++   ++V  ++  +C+FC
Sbjct: 255 NESNVLGRRRSHDTVELLSEKCEVDVANRLISVCVFC 291


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,468,865
Number of Sequences: 37544
Number of extensions: 252569
Number of successful extensions: 514
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 514
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)