Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_G23
(942 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0005 + 11568545-11569119,11569179-11569191 36 0.062
01_01_0083 + 631196-631675 35 0.11
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 32 0.76
02_05_0686 - 30900748-30902167,30903442-30904742 31 1.0
07_03_1691 - 28726307-28726323,28726588-28726953,28727483-287275... 31 1.8
06_03_0927 + 26015956-26018230,26018323-26018471,26018550-260186... 30 3.1
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 30 3.1
02_04_0180 + 20696258-20698398,20698691-20698871,20698998-20699060 30 3.1
02_01_0615 - 4604373-4604537,4604618-4604707,4604871-4604989,460... 30 3.1
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 30 3.1
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 29 4.1
02_04_0382 - 22501041-22501279,22501717-22501810 29 4.1
09_04_0745 + 19884868-19886000,19886110-19886309,19886422-198866... 29 5.4
07_01_0080 + 587674-588510 29 5.4
09_03_0049 + 11889214-11890302 29 7.1
06_03_1381 - 29754405-29754525,29754617-29754671,29755383-297554... 29 7.1
03_02_0506 + 8992893-8993669 29 7.1
01_01_0715 - 5542648-5543219,5543352-5543544 28 9.4
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 35.5 bits (78), Expect = 0.062
Identities = 18/40 (45%), Positives = 18/40 (45%)
Frame = -1
Query: 723 GGGGAXXEXQPPPPPXXGXGXGGXPXGXKXXPRXPPXGGG 604
GGGG PPPP G G GG G PP GGG
Sbjct: 82 GGGGGTVMYTSPPPPYSG-GGGGSSTGGGGIYYPPPTGGG 120
Score = 28.7 bits (61), Expect = 7.1
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 605 PPPXGGXRGXXXXPXGXPPXPXPXXGGGGG 694
PPP G G G P P GGGGG
Sbjct: 94 PPPYSGGGGGSSTGGGGIYYPPPTGGGGGG 123
Score = 28.3 bits (60), Expect = 9.4
Identities = 15/43 (34%), Positives = 17/43 (39%), Gaps = 3/43 (6%)
Frame = +2
Query: 644 PXGXPPXPXPXXGGGGG---CXSXXAPPPPXNXXXXXXXXXGG 763
P PP P GGGGG +PPPP + GG
Sbjct: 67 PQCPPPPSYPSGGGGGGGGGTVMYTSPPPPYSGGGGGSSTGGG 109
>01_01_0083 + 631196-631675
Length = 159
Score = 34.7 bits (76), Expect = 0.11
Identities = 19/40 (47%), Positives = 20/40 (50%)
Frame = +2
Query: 605 PPPXGGXRGXXXXPXGXPPXPXPXXGGGGGCXSXXAPPPP 724
PPP GG G P PP GGGGG + APPPP
Sbjct: 78 PPPQGG--GGGYIPYYQPPA---GGGGGGGGFNYPAPPPP 112
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 31.9 bits (69), Expect = 0.76
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +2
Query: 605 PPPXGGXRGXXXXPXGXPPXPXPXXGGGGGCXSXXAPPPP 724
PPP G + P PP P P S PPPP
Sbjct: 551 PPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPP 590
Score = 29.9 bits (64), Expect = 3.1
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +2
Query: 605 PPPXGGXRGXXXXPXGXPPXPXPXXGGGGGCXSXXAPPPP 724
PPP G P PP P P PPPP
Sbjct: 552 PPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPP 591
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 31.5 bits (68), Expect = 1.0
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -2
Query: 383 PXPXGGPPNPXXPXVPQKXXXFAPXXXGGGXPPP 282
P P GPP P P P P GG PPP
Sbjct: 347 PPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPP 380
Score = 29.1 bits (62), Expect = 5.4
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -1
Query: 693 PPPPPXXGXGXGGXPXGXKXXPRXPPXG 610
PPPPP G P G P PP G
Sbjct: 345 PPPPPAKGPPPPPPPKGPSPPPPPPPGG 372
Score = 28.3 bits (60), Expect = 9.4
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = -1
Query: 693 PPPPPXXGXGXGGXPX--GXKXXPRXPPXGGG 604
PPPPP G P G K P PP GG
Sbjct: 354 PPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGG 385
>07_03_1691 -
28726307-28726323,28726588-28726953,28727483-28727567,
28728255-28728387,28729793-28730328
Length = 378
Score = 30.7 bits (66), Expect = 1.8
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +2
Query: 605 PPPXGGXRGXXXXPXGXPPXPXPXXGGGGGCXSXXAPPPP 724
P P P PP P GGGG + PPPP
Sbjct: 11 PSPGRSPNPNLNLPCPLPPIPSCGGGGGGAGPTPPPPPPP 50
>06_03_0927 +
26015956-26018230,26018323-26018471,26018550-26018618,
26018701-26018853,26018927-26019090,26019207-26019354,
26020348-26020470,26020560-26020647,26020781-26020950
Length = 1112
Score = 29.9 bits (64), Expect = 3.1
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +2
Query: 650 GXPPXPXPXXGGGGGCXSXXAPPP 721
G PP P P GGGGG S A P
Sbjct: 164 GGPPPPAPTSGGGGGGGSPTALSP 187
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.9 bits (64), Expect = 3.1
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = -2
Query: 401 GGXXGXPXPXGGPPNPXXPXVPQKXXXFAPXXXGGGXPPP 282
GG G P P G P P P VP P G G P P
Sbjct: 1193 GGVGGPPTPPGAPAPPMPPGVPGGP---PPPPGGRGLPAP 1229
Score = 28.7 bits (61), Expect = 7.1
Identities = 17/46 (36%), Positives = 17/46 (36%), Gaps = 6/46 (13%)
Frame = +2
Query: 605 PPPXGGXRGXXXXPXGX------PPXPXPXXGGGGGCXSXXAPPPP 724
PPP G RG P PP P G GG AP PP
Sbjct: 1163 PPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPP 1208
>02_04_0180 + 20696258-20698398,20698691-20698871,20698998-20699060
Length = 794
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Frame = -1
Query: 693 PPPPPXXGXGXG--GXPXGXKXXPRXPP 616
PPPPP G G G G P G K PP
Sbjct: 13 PPPPPPFGRGGGGAGYPRGHKQLYAPPP 40
>02_01_0615 -
4604373-4604537,4604618-4604707,4604871-4604989,
4605132-4605234,4605318-4605414,4605512-4605575,
4605673-4605805,4605899-4606143,4606263-4606439,
4607110-4607419
Length = 500
Score = 29.9 bits (64), Expect = 3.1
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 605 PPPXGGXRGXXXXPXGXPPXPXPXXGGGGG 694
P P G P PP P P GGGGG
Sbjct: 46 PSPGPGPSPAPATPRVVPPAPAPATGGGGG 75
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 29.9 bits (64), Expect = 3.1
Identities = 15/41 (36%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Frame = -1
Query: 723 GGGGAXXEXQP-PPPPXXGXGXGGXPXGXKXXPRXPPXGGG 604
GG A PPP G G G P P PP GG
Sbjct: 326 GGNNAYNSDSAVPPPSSYGGGPGSYPPSYGAPPPNPPYSGG 366
Score = 28.7 bits (61), Expect = 7.1
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = +2
Query: 605 PPPXGGXRGXXXXPXGXPPX-PXPXXGGGGG 694
PP G G P G P P P GGGGG
Sbjct: 375 PPSYDGGYGGRPMPGGGGPGAPPPYHGGGGG 405
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = -3
Query: 301 GGGXPPPKXTXXWGXXXXPPQT--GGXRARGP 212
G G PPP G PP GG RARGP
Sbjct: 367 GPGPPPPPGAAGRGGGGPPPPALPGGPRARGP 398
Score = 28.3 bits (60), Expect = 9.4
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +2
Query: 605 PPPXGGXRGXXXXPXGXPPXPXPXXGGGGGCXSXXAPPPP 724
PPP PP P P G G G + PPPP
Sbjct: 287 PPPLPPSHHHHHGHHPPPPHPLP-PGAGAGAGTGAPPPPP 325
Score = 26.6 bits (56), Expect(2) = 4.5
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = -1
Query: 693 PPPPPXXGXGXGGXPXGXKXXPRXPPXGGG 604
PPPPP P G P PP G
Sbjct: 349 PPPPPPPAAPAAPRPPGPGPGPPPPPGAAG 378
Score = 21.0 bits (42), Expect(2) = 4.5
Identities = 7/15 (46%), Positives = 7/15 (46%)
Frame = -1
Query: 723 GGGGAXXEXQPPPPP 679
G G PPPPP
Sbjct: 311 GAGAGAGTGAPPPPP 325
>02_04_0382 - 22501041-22501279,22501717-22501810
Length = 110
Score = 29.5 bits (63), Expect = 4.1
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 644 PXGXPPXPXPXXGGGGGCXSXXAPPP 721
P P P P GGGGG PPP
Sbjct: 78 PDYYDPPPSPYYGGGGGYGKPPPPPP 103
>09_04_0745 +
19884868-19886000,19886110-19886309,19886422-19886666,
19886880-19887668
Length = 788
Score = 29.1 bits (62), Expect = 5.4
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +2
Query: 608 PPXGGXRGXXXXPXGXPPXPXPXXGGGGGCXSXXAPPPP 724
PP R P PP P P + APPPP
Sbjct: 257 PPPQSVRPPPPPPPPPPPPPMPPRTDNASTQAAPAPPPP 295
>07_01_0080 + 587674-588510
Length = 278
Score = 29.1 bits (62), Expect = 5.4
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = -1
Query: 723 GGGGAXXEXQPPPPPXXGXGXGGXPXGXKXXPRXPP 616
GG G PPPPP G P P PP
Sbjct: 83 GGDGMFRRPPPPPPPPPSSGSPPPPPPPPPPPPPPP 118
>09_03_0049 + 11889214-11890302
Length = 362
Score = 28.7 bits (61), Expect = 7.1
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -1
Query: 723 GGGGAXXEXQPPPPPXXGXGXGG 655
GGGGA P PP G G GG
Sbjct: 43 GGGGAAAPLPPRAPPRVGGGGGG 65
>06_03_1381 -
29754405-29754525,29754617-29754671,29755383-29755440,
29755819-29755988,29756576-29756780
Length = 202
Score = 28.7 bits (61), Expect = 7.1
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 4/31 (12%)
Frame = -1
Query: 723 GGGGAXXEXQ----PPPPPXXGXGXGGXPXG 643
GGGG E + PPPPP G GG G
Sbjct: 7 GGGGGAGEARGADAPPPPPVAAGGGGGAVKG 37
>03_02_0506 + 8992893-8993669
Length = 258
Score = 28.7 bits (61), Expect = 7.1
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 7/42 (16%)
Frame = -1
Query: 723 GGGGAXXEXQPPPPPXXGXGXG-------GXPXGXKXXPRXP 619
G GG+ E + PPP G G G P G K P+ P
Sbjct: 20 GAGGSNEEEEASPPPGGGSATGSAGRRPRGRPPGSKNKPKPP 61
>01_01_0715 - 5542648-5543219,5543352-5543544
Length = 254
Score = 28.3 bits (60), Expect = 9.4
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +2
Query: 605 PPPXGGXRGXXXXPXGXPPXPXPXXGGGGGCXSXXAPPPP 724
PPP G G P PP P P G S PPPP
Sbjct: 162 PPPAAGTNGTARAP--SPPVPAPAPAG-----SPPPPPPP 194
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.154 0.549
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,782,264
Number of Sequences: 37544
Number of extensions: 374950
Number of successful extensions: 1538
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1388
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2706104940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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