Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_G23
(942 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 0.018
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 36 0.056
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 35 0.097
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 35 0.097
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 35 0.097
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 33 0.30
AF068713-16|AAD34663.1| 156|Caenorhabditis elegans Ground-like ... 33 0.39
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.52
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.52
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.52
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 0.90
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 0.90
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 0.90
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 0.90
AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical ... 31 1.2
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 31 1.6
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.1
AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (... 30 2.1
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 29 3.6
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 29 3.6
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 29 3.6
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 3.6
AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical ... 29 4.8
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 29 4.8
AC006636-3|AAF39799.1| 139|Caenorhabditis elegans Ground-like (... 29 4.8
Z69903-1|CAA93772.1| 137|Caenorhabditis elegans Hypothetical pr... 29 6.4
U88167-5|AAB42227.1| 107|Caenorhabditis elegans Hypothetical pr... 29 6.4
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 6.4
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 6.4
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 28 8.4
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 28 8.4
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 28 8.4
AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical ... 28 8.4
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.5 bits (68), Expect = 0.90
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 680 GGGGGCXSXXAPPPP 724
GGGGGC APPPP
Sbjct: 43 GGGGGCGGGCAPPPP 57
Score = 31.5 bits (68), Expect(2) = 0.018
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 680 GGGGGCXSXXAPPPP 724
GGGGGC APPPP
Sbjct: 100 GGGGGCGGGCAPPPP 114
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = -1
Query: 723 GGGGAXXEXQPPPPP-XXGXGXGGXPXGXKXXPRXPPXGGG 604
GGGG PPPPP G G GG G GGG
Sbjct: 44 GGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGG 84
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = -1
Query: 723 GGGGAXXEXQPPPPP-XXGXGXGGXPXG 643
GGGG PPPPP G G GG G
Sbjct: 101 GGGGCGGGCAPPPPPPACGGGCGGGGGG 128
Score = 24.6 bits (51), Expect(2) = 0.018
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 617 GGXRGXXXXPXGXPPXPXPXXGGGGGC 697
GG G P P GGGGGC
Sbjct: 46 GGCGGGCAPPPPPPACGGGCGGGGGGC 72
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 35.5 bits (78), Expect = 0.056
Identities = 18/41 (43%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = -1
Query: 723 GGGGAXXEXQPPPPPXXGXGXGGXP--XGXKXXPRXPPXGG 607
GGGG PPPPP G GG P G P+ P GG
Sbjct: 22 GGGGGGCCAPPPPPPCGGGCGGGAPAAGGYAVAPQAPIGGG 62
Score = 34.3 bits (75), Expect = 0.13
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = -1
Query: 723 GGGGAXXEXQPPPPPXXGXGXGGXPXGXKXXPRXPPXGGG 604
GGGG PPPP G G G G P GGG
Sbjct: 23 GGGGGCCAPPPPPPCGGGCGGGAPAAGGYAVAPQAPIGGG 62
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 34.7 bits (76), Expect = 0.097
Identities = 17/40 (42%), Positives = 17/40 (42%)
Frame = +2
Query: 605 PPPXGGXRGXXXXPXGXPPXPXPXXGGGGGCXSXXAPPPP 724
PPP G G P G PP P P G G PPPP
Sbjct: 301 PPPPGRTPGPPGMP-GMPPPPPPSRFGPPGMGGMPPPPPP 339
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +2
Query: 605 PPPXGGXRGXXXXPXGXPPXPXPXXGGGGGCXSXXAPPPP 724
PPP G R P G PP P P G PPPP
Sbjct: 335 PPPPPGMR----YPGGMPPPPPPRYPSAG--PGMYPPPPP 368
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 34.7 bits (76), Expect = 0.097
Identities = 17/40 (42%), Positives = 17/40 (42%)
Frame = +2
Query: 605 PPPXGGXRGXXXXPXGXPPXPXPXXGGGGGCXSXXAPPPP 724
PPP G G P G PP P P G G PPPP
Sbjct: 311 PPPPGRTPGPPGMP-GMPPPPPPSRFGPPGMGGMPPPPPP 349
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +2
Query: 605 PPPXGGXRGXXXXPXGXPPXPXPXXGGGGGCXSXXAPPPP 724
PPP G R P G PP P P G PPPP
Sbjct: 345 PPPPPGMR----YPGGMPPPPPPRYPSAG--PGMYPPPPP 378
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 34.7 bits (76), Expect = 0.097
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -1
Query: 723 GGGGAXXEXQPPPPPXXGXGXGGXPXGXKXXPRXPPXGG 607
GGGG PPPPP G G GG P GG
Sbjct: 22 GGGGGCGCAPPPPPPACGCGGGGGGYAAPPPAYAAPAGG 60
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2
Query: 656 PPXPXPXXGGGGGCXSXXAPPP 721
PP P P G GGG APPP
Sbjct: 31 PPPPPPACGCGGGGGGYAAPPP 52
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 680 GGGGGCXSXXAPPPP 724
GGGGGC PPPP
Sbjct: 22 GGGGGCGCAPPPPPP 36
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = +2
Query: 611 PXGGXRGXXXXPXGXPPXPXPXXGGGGGCXSXXAPPPP 724
P GG G P PP P GGGGG A PPP
Sbjct: 20 PSGGGGGCGCAPP--PPPPACGCGGGGG---GYAAPPP 52
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 33.1 bits (72), Expect = 0.30
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = -1
Query: 723 GGGGAXXEXQPPPPPXXGXGXGGXPXGXKXXP-RXPPXGGG 604
GGGG PPPP G G GG + P P GGG
Sbjct: 23 GGGGCGCAPPPPPPSPCGCGGGGGLALPQLPPLSLPSLGGG 63
Score = 31.9 bits (69), Expect = 0.68
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +2
Query: 605 PPPXGGXRGXXXXPXGXPPXPXPXXGGGGGCXSXXAP 715
P P G G PP P GGGGGC AP
Sbjct: 36 PSPCGCGGGGGLALPQLPPLSLPSLGGGGGCCPPPAP 72
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = -1
Query: 720 GGGAXXEXQPPPPPXXGXGXGGXPXGXKXXPRXPP 616
GGG PPPPP G GG G P+ PP
Sbjct: 22 GGGGGCGCAPPPPPPSPCGCGG--GGGLALPQLPP 54
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +2
Query: 611 PXGGXRGXXXXPXGXPPXPXPXXGGGGGCXSXXAPP 718
P GG G P PP P GGGGG PP
Sbjct: 20 PSGGGGGCGCAPPPPPPSPCG-CGGGGGLALPQLPP 54
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 680 GGGGGCXSXXAPPPP 724
GGGGGC PPPP
Sbjct: 22 GGGGGCGCAPPPPPP 36
>AF068713-16|AAD34663.1| 156|Caenorhabditis elegans Ground-like
(grd related) protein31 protein.
Length = 156
Score = 32.7 bits (71), Expect = 0.39
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = -1
Query: 723 GGGGAXXEXQPPPPPXXGXGXGGXPXGXKXXPRXPPXGG 607
GG G PPPPP G G GG + P P G
Sbjct: 38 GGCGGGCGCAPPPPPCCGGGCGGCGRKKRSLPEKPTFVG 76
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.52
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +2
Query: 605 PPPXGGXRGXXXXPXGXPPXPXPXXGGGGGCXSXXAPPPP 724
PPP G G PP P P GGC PPPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPP----GGCPPPPPPPPP 777
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +2
Query: 605 PPPXGGXRGXXXXPXGXPPXPXPXXGGGGGCXSXXAPPPP 724
PP GG P G PP P P GG PPPP
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGG---FKGGPPPPP 788
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +3
Query: 213 GPRARLPPVWGGXXXXPXIXVXXGGGXPPP 302
G + LPP+ GG P + GG PPP
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPP 730
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = -1
Query: 399 GGKXXPXPXGGAPKPXXXPRSPKRXXFCXXXTGGGXPPP 283
GG P P GG P P P +GG PPP
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +2
Query: 608 PPXGGXRGXXXXPXGXPPXPXPXXGGGGGCXSXXAPPPP 724
PP G P G P P P GG PPPP
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Frame = +1
Query: 286 GGXPPPXXXGAKXXSFWGTXGXXGFGG-PPXGXGXPFXPPP 405
GG PPP G G GG PP G P PPP
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
Score = 28.3 bits (60), Expect = 8.4
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -2
Query: 401 GGXXGXPXPXGGPPNPXXPXVPQKXXXFAPXXXGGGXPPP 282
GG P P G PP P P P G PPP
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +2
Query: 605 PPPXGGXRGXXXXPXGXPPXPXPXXGGGGGCXSXXAPPPP 724
PPP G G PP P P GG S PPPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPP---GGLPPISGGPPPPP 762
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.52
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +2
Query: 605 PPPXGGXRGXXXXPXGXPPXPXPXXGGGGGCXSXXAPPPP 724
PPP G G PP P P GGC PPPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPP----GGCPPPPPPPPP 777
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +2
Query: 605 PPPXGGXRGXXXXPXGXPPXPXPXXGGGGGCXSXXAPPPP 724
PP GG P G PP P P GG PPPP
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGG---FKGGPPPPP 788
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +3
Query: 213 GPRARLPPVWGGXXXXPXIXVXXGGGXPPP 302
G + LPP+ GG P + GG PPP
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPP 730
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = -1
Query: 399 GGKXXPXPXGGAPKPXXXPRSPKRXXFCXXXTGGGXPPP 283
GG P P GG P P P +GG PPP
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +2
Query: 608 PPXGGXRGXXXXPXGXPPXPXPXXGGGGGCXSXXAPPPP 724
PP G P G P P P GG PPPP
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Frame = +1
Query: 286 GGXPPPXXXGAKXXSFWGTXGXXGFGG-PPXGXGXPFXPPP 405
GG PPP G G GG PP G P PPP
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
Score = 28.3 bits (60), Expect = 8.4
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -2
Query: 401 GGXXGXPXPXGGPPNPXXPXVPQKXXXFAPXXXGGGXPPP 282
GG P P G PP P P P G PPP
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +2
Query: 605 PPPXGGXRGXXXXPXGXPPXPXPXXGGGGGCXSXXAPPPP 724
PPP G G PP P P GG S PPPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPP---GGLPPISGGPPPPP 762
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.3 bits (70), Expect = 0.52
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +2
Query: 605 PPPXGGXRGXXXXPXGXPPXPXPXXGGGGGCXSXXAPPPP 724
PPP G G PP P P GGC PPPP
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPP----GGCPPPPPPPPP 360
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +2
Query: 605 PPPXGGXRGXXXXPXGXPPXPXPXXGGGGGCXSXXAPPPP 724
PP GG P G PP P P GG PPPP
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPPPPGG---FKGGPPPPP 371
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +3
Query: 213 GPRARLPPVWGGXXXXPXIXVXXGGGXPPP 302
G + LPP+ GG P + GG PPP
Sbjct: 284 GGSSALPPITGGPPPPPGLPPITGGPPPPP 313
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = -1
Query: 399 GGKXXPXPXGGAPKPXXXPRSPKRXXFCXXXTGGGXPPP 283
GG P P GG P P P +GG PPP
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 345
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +2
Query: 608 PPXGGXRGXXXXPXGXPPXPXPXXGGGGGCXSXXAPPPP 724
PP G P G P P P GG PPPP
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Frame = +1
Query: 286 GGXPPPXXXGAKXXSFWGTXGXXGFGG-PPXGXGXPFXPPP 405
GG PPP G G GG PP G P PPP
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 347
Score = 28.3 bits (60), Expect = 8.4
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -2
Query: 401 GGXXGXPXPXGGPPNPXXPXVPQKXXXFAPXXXGGGXPPP 282
GG P P G PP P P P G PPP
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 346
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +2
Query: 605 PPPXGGXRGXXXXPXGXPPXPXPXXGGGGGCXSXXAPPPP 724
PPP G G PP P P GG S PPPP
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPP---GGLPPISGGPPPPP 345
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.5 bits (68), Expect = 0.90
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +1
Query: 283 GGGXPPPXXXGAKXXSFW-GTXGXXGFGGPPXGXGXPFXPPP 405
GG PPP S+ G GFG PP G + PPP
Sbjct: 407 GGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPP 448
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 605 PPPXGGXRGXXXXPXGXPPXPXPXXGGGG 691
PPP GG P G PP P G G
Sbjct: 435 PPPPGGPGAYGPPPTGFPPVGAPPPGAAG 463
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.5 bits (68), Expect = 0.90
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 3/43 (6%)
Frame = +2
Query: 605 PPPXGGXRGXXXXPXGXPPX---PXPXXGGGGGCXSXXAPPPP 724
PPP G P G PP P P GG +PPPP
Sbjct: 290 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 332
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = -2
Query: 404 GGGXXGXPXPXGGPPNPXXPXVPQKXXXFAPXXXGGGXPPP 282
G G P G PP P P P GG PPP
Sbjct: 251 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 291
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Frame = +2
Query: 620 GXRGXXXXPX-GXPPXPXPXXGGGGGCXSXXAPPPP 724
G RG P G PP P P G S PPPP
Sbjct: 224 GFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPP 259
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = -1
Query: 396 GKXXPXPXGGAPKPXXXPRSPKRXXFCXXXTGGGXPPP 283
G P P G+P P PR GG PPP
Sbjct: 286 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 323
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.5 bits (68), Expect = 0.90
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 3/43 (6%)
Frame = +2
Query: 605 PPPXGGXRGXXXXPXGXPPX---PXPXXGGGGGCXSXXAPPPP 724
PPP G P G PP P P GG +PPPP
Sbjct: 311 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 353
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = -2
Query: 404 GGGXXGXPXPXGGPPNPXXPXVPQKXXXFAPXXXGGGXPPP 282
G G P G PP P P P GG PPP
Sbjct: 272 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 312
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Frame = +2
Query: 620 GXRGXXXXPX-GXPPXPXPXXGGGGGCXSXXAPPPP 724
G RG P G PP P P G S PPPP
Sbjct: 245 GFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPP 280
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = -1
Query: 396 GKXXPXPXGGAPKPXXXPRSPKRXXFCXXXTGGGXPPP 283
G P P G+P P PR GG PPP
Sbjct: 307 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 344
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.5 bits (68), Expect = 0.90
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 3/43 (6%)
Frame = +2
Query: 605 PPPXGGXRGXXXXPXGXPPX---PXPXXGGGGGCXSXXAPPPP 724
PPP G P G PP P P GG +PPPP
Sbjct: 296 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 338
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = -2
Query: 404 GGGXXGXPXPXGGPPNPXXPXVPQKXXXFAPXXXGGGXPPP 282
G G P G PP P P P GG PPP
Sbjct: 257 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 297
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Frame = +2
Query: 620 GXRGXXXXPX-GXPPXPXPXXGGGGGCXSXXAPPPP 724
G RG P G PP P P G S PPPP
Sbjct: 230 GFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPP 265
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = -1
Query: 396 GKXXPXPXGGAPKPXXXPRSPKRXXFCXXXTGGGXPPP 283
G P P G+P P PR GG PPP
Sbjct: 292 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 329
>AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical
protein C02E7.6 protein.
Length = 70
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 720 GGGAXXEXQPPPPPXXGXGXGGXP 649
GGG PPPPP G G G P
Sbjct: 22 GGGGGCGCAPPPPPACGCGGGAAP 45
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +2
Query: 284 GGGXPPPVXXXQKXXLFGERGXXXGLGAPPXGXGXXXPPP 403
G G PPP + L GE PP G G PPP
Sbjct: 39 GTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPPP 78
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +2
Query: 284 GGGXPPPVXXXQKXXLFGERGXXXGLGAPPXGXGXXXPPP 403
G G PPP + L GE PP G G PPP
Sbjct: 102 GTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPP 141
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +2
Query: 284 GGGXPPPVXXXQKXXLFGERGXXXGLGAPPXGXGXXXPPP 403
G G PPP + L GE PP G G PPP
Sbjct: 133 GTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPP 172
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 3/43 (6%)
Frame = -1
Query: 723 GGGGAXXEXQPPPPPXXGX---GXGGXPXGXKXXPRXPPXGGG 604
GG G PPP P G G GG G P P GGG
Sbjct: 40 GGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGG 82
Score = 28.3 bits (60), Expect = 8.4
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 6/41 (14%)
Frame = +2
Query: 617 GGXRGXXXXPXGXPPXPXPXXGG----GGGC--XSXXAPPP 721
GG G G P P P GG GGGC APPP
Sbjct: 36 GGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPP 76
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 3/43 (6%)
Frame = -1
Query: 723 GGGGAXXEXQPPPPPXXGX---GXGGXPXGXKXXPRXPPXGGG 604
GG G PPP P G G GG G P P GGG
Sbjct: 40 GGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGG 82
Score = 28.3 bits (60), Expect = 8.4
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 6/41 (14%)
Frame = +2
Query: 617 GGXRGXXXXPXGXPPXPXPXXGG----GGGC--XSXXAPPP 721
GG G G P P P GG GGGC APPP
Sbjct: 36 GGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPP 76
>AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (grd
related) protein19 protein.
Length = 157
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -1
Query: 723 GGGGAXXEXQPPPPPXXGXGXGG 655
GGGG PPPP G G GG
Sbjct: 37 GGGGGCCAPPPPPPVCGGCGCGG 59
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -1
Query: 723 GGGGAXXEXQPPPPPXXGXGXGGXP 649
GGGG PPPPP G G P
Sbjct: 22 GGGGGCGCAPPPPPPPCGCGAPALP 46
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 680 GGGGGCXSXXAPPPP 724
GGGGGC PPPP
Sbjct: 22 GGGGGCGCAPPPPPP 36
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -1
Query: 723 GGGGAXXEXQPPPPPXXGXGXGGXP 649
GGGG PPPPP G G P
Sbjct: 22 GGGGGCGCAPPPPPPPCGCGGPSLP 46
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 680 GGGGGCXSXXAPPPP 724
GGGGGC PPPP
Sbjct: 22 GGGGGCGCAPPPPPP 36
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -1
Query: 723 GGGGAXXEXQPPPPPXXGXGXGGXP 649
GGGG PPPPP G G P
Sbjct: 22 GGGGGCGCAPPPPPPPCGCGAPALP 46
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 680 GGGGGCXSXXAPPPP 724
GGGGGC PPPP
Sbjct: 22 GGGGGCGCAPPPPPP 36
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/48 (41%), Positives = 20/48 (41%), Gaps = 4/48 (8%)
Frame = +1
Query: 274 LXXGGGXP--PPXXXGAKXX--SFWGTXGXXGFGGPPXGXGXPFXPPP 405
L GGG P PP G G G G GGPP G G PPP
Sbjct: 157 LMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPP-GHGGMGGPPP 203
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +1
Query: 283 GGGXPPPXXXGAKXXSFWGTXGXXGFGGPPXGXGXPFXP 399
GG PP G G G G GGPP G G P P
Sbjct: 178 GGMGGPPGHGGQG-----GPPGHGGMGGPPPGQGGPGGP 211
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/48 (41%), Positives = 20/48 (41%), Gaps = 4/48 (8%)
Frame = +1
Query: 274 LXXGGGXP--PPXXXGAKXX--SFWGTXGXXGFGGPPXGXGXPFXPPP 405
L GGG P PP G G G G GGPP G G PPP
Sbjct: 437 LMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPP-GHGGMGGPPP 483
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +1
Query: 283 GGGXPPPXXXGAKXXSFWGTXGXXGFGGPPXGXGXPFXP 399
GG PP G G G G GGPP G G P P
Sbjct: 458 GGMGGPPGHGGQG-----GPPGHGGMGGPPPGQGGPGGP 491
>AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical
protein Y48B6A.3 protein.
Length = 892
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = -1
Query: 723 GGGGAXXEXQPPPPPXXGXGXGGXPXGXKXXPRXPPXGGG 604
GGGG+ + G G GG P G + P GGG
Sbjct: 845 GGGGSYHQPYNQDQRRGGRGGGGGPPGYQRPPYRGGGGGG 884
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 680 GGGGGCXSXXAPPPP 724
GGGGGC PPPP
Sbjct: 24 GGGGGCGCGAPPPPP 38
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 671 PXXGGGGGCXSXXAPPPP 724
P GGGGG APPPP
Sbjct: 20 PSAGGGGGGCGCGAPPPP 37
>AC006636-3|AAF39799.1| 139|Caenorhabditis elegans Ground-like (grd
related) protein27 protein.
Length = 139
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 680 GGGGGCXSXXAPPPP 724
GGGGGC PPPP
Sbjct: 25 GGGGGCGCGAPPPPP 39
Score = 28.3 bits (60), Expect = 8.4
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 723 GGGGAXXEXQPPPPPXXGXG 664
GGGG PPPPP G G
Sbjct: 25 GGGGGCGCGAPPPPPACGCG 44
>Z69903-1|CAA93772.1| 137|Caenorhabditis elegans Hypothetical
protein F46F2.3 protein.
Length = 137
Score = 28.7 bits (61), Expect = 6.4
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -1
Query: 723 GGGGAXXEXQPPPPP 679
GGGGA + PPPPP
Sbjct: 108 GGGGAYAQAPPPPPP 122
>U88167-5|AAB42227.1| 107|Caenorhabditis elegans Hypothetical
protein D2092.8 protein.
Length = 107
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +2
Query: 617 GGXRGXXXXPXGXPPXPXPXXGGGGGCXSXXAPPPP 724
GG G P PP P P GGGC + P P
Sbjct: 27 GGCGGAAASPCAAPPMPPP-VSCGGGCGAAPYPAGP 61
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Frame = +2
Query: 605 PPPXGGXRGXXXXPXGXPPXPXP-XXGGGGGCXSXXAPPPP 724
PPP G G PP P P G GG S A PP
Sbjct: 632 PPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGPASVLAKLPP 672
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Frame = +2
Query: 605 PPPXGGXRGXXXXPXGXPPXPXP-XXGGGGGCXSXXAPPPP 724
PPP G G PP P P G GG S A PP
Sbjct: 458 PPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGPASVLAKLPP 498
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +2
Query: 605 PPPXGGXRGXXXXPXGXPPXPXPXXGGGGGCXSXXAPPPP 724
PPP GG G PP P G G PPPP
Sbjct: 219 PPPIGGIA--PVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 256
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +2
Query: 605 PPPXGGXRGXXXXPXGXPPXPXPXXGGGGGCXSXXAPPPP 724
PPP GG G PP P G G PPPP
Sbjct: 205 PPPIGGIA--PVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 242
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +2
Query: 605 PPPXGGXRGXXXXPXGXPPXPXPXXGGGGGCXSXXAPPPP 724
PPP GG G PP P G G PPPP
Sbjct: 205 PPPIGGIA--PVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 242
>AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical
protein Y55F3AR.2 protein.
Length = 254
Score = 28.3 bits (60), Expect = 8.4
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 644 PXGXPPXPXPXXGGGGGCXSXXAPPPP 724
P G P P GG G PPPP
Sbjct: 212 PRGGGPAPGAPRAGGSGAGGAPRPPPP 238
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.154 0.549
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,963,310
Number of Sequences: 27780
Number of extensions: 208382
Number of successful extensions: 1559
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1306
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2433684176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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