Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_G22
         (871 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0771 - 5982826-5983327,5983424-5984772                           30   2.8  
09_04_0717 + 19706160-19706327,19707036-19707157,19707408-197075...    29   6.4  

>01_01_0771 - 5982826-5983327,5983424-5984772
          Length = 616

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = -2

Query: 333 DSXPSPSVAALGSFRAA*SAXTPASYEPRF 244
           D  P PS A+ G++RAA  A TPA +  RF
Sbjct: 29  DFFPEPSFASWGAYRAA-LAATPARFRDRF 57


>09_04_0717 +
           19706160-19706327,19707036-19707157,19707408-19707510,
           19707644-19707734,19707960-19708132,19708534-19708622,
           19708995-19709085,19709272-19709361,19709807-19709854,
           19710033-19710104,19710181-19710274,19710350-19710494,
           19710809-19710951,19711601-19711751,19712276-19712449,
           19712799-19712874
          Length = 609

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -3

Query: 128 TYNKQHFHNICGAWYRAYRSTRLHGSSLKS 39
           +Y K HF  +C + +RAYR+   HGS  +S
Sbjct: 482 SYEKAHFA-LCASEHRAYRTMTPHGSDDRS 510


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,644,240
Number of Sequences: 37544
Number of extensions: 261359
Number of successful extensions: 474
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 474
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)