Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_G11
         (943 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27...    30   2.3  
07_03_1136 + 24218601-24218734,24218769-24219906                       29   4.1  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   5.4  
05_01_0492 - 4102379-4103494,4104105-4104383,4105395-4105724           29   7.1  
06_03_1121 + 27767707-27768065,27768612-27769034,27770013-277701...    28   9.4  

>12_01_0033 -
           272848-272943,274026-274169,274264-274375,274521-274702,
           274781-274912,275038-276330,279841-280545,280649-280695,
           280787-280865
          Length = 929

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 15/35 (42%), Positives = 15/35 (42%)
 Frame = +1

Query: 505 PPPAPRXXXVRLGGPXXXPPRGXXGXPPDXGXTPG 609
           PPP PR      G P   PP G  G PP     PG
Sbjct: 614 PPPPPRPP----GAPPPPPPPGKPGGPPPPPPRPG 644


>07_03_1136 + 24218601-24218734,24218769-24219906
          Length = 423

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 17/49 (34%), Positives = 19/49 (38%)
 Frame = -3

Query: 653 LRVXALXXPXXXXXFPGVXPXSGGNPXXPLGGXXXGPPNRTXXXRGAGG 507
           L +  L  P      PG  P  GG    P GG   GPP+      G GG
Sbjct: 83  LPIKLLGLPPGGGGAPG--PLGGGGARPPGGGGGGGPPSLPPGAGGGGG 129



 Score = 29.1 bits (62), Expect = 5.4
 Identities = 13/34 (38%), Positives = 13/34 (38%)
 Frame = -3

Query: 608 PGVXPXSGGNPXXPLGGXXXGPPNRTXXXRGAGG 507
           PG     G  P  P GG   G P R     G GG
Sbjct: 122 PGAGGGGGARPPAPGGGGGGGAPRRVLGGGGGGG 155



 Score = 28.3 bits (60), Expect = 9.4
 Identities = 30/93 (32%), Positives = 30/93 (32%)
 Frame = -3

Query: 782 GGNPXGXXKGRGGLXPLRTWGXXFXXXRXGGXGLWEKAXKXXLLRVXALXXPXXXXXFPG 603
           G  P     G GG  P R  G        GG G    A      R  AL  P      PG
Sbjct: 129 GARPPAPGGGGGGGAPRRVLG--------GGGGGGALARPPGGGRGGALGRP------PG 174

Query: 602 VXPXSGGNPXXPLGGXXXGPPNRTXXXRGAGGG 504
                GG    P GG   G P R     G GGG
Sbjct: 175 GGGGGGGPGRAPGGGGGGGGPGRAPGGGGGGGG 207


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 12/33 (36%), Positives = 14/33 (42%)
 Frame = +1

Query: 508 PPAPRXXXVRLGGPXXXPPRGXXGXPPDXGXTP 606
           PP P     + GGP   PP+G    PP     P
Sbjct: 364 PPPPPPPGGKKGGPPPPPPKGGASRPPAAPGVP 396


>05_01_0492 - 4102379-4103494,4104105-4104383,4105395-4105724
          Length = 574

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 15/35 (42%), Positives = 15/35 (42%)
 Frame = +1

Query: 505 PPPAPRXXXVRLGGPXXXPPRGXXGXPPDXGXTPG 609
           PPP      VRL  P   PP G    PP  G  PG
Sbjct: 394 PPPQSYPPNVRLPSPYVPPPSGP--APPFYGPNPG 426


>06_03_1121 +
           27767707-27768065,27768612-27769034,27770013-27770175,
           27770271-27770381,27770895-27770963,27771117-27771203,
           27771967-27772752
          Length = 665

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 14/36 (38%), Positives = 14/36 (38%)
 Frame = -1

Query: 691 GXAXGKKPAKXXFYGXXPFXGPXXXXXFPGXPPXPG 584
           G   G  P    F G     GP     FPG PP PG
Sbjct: 510 GVPRGFPPFGPRFPGDFARGGPMPGMVFPGRPPQPG 545


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,927,971
Number of Sequences: 37544
Number of extensions: 326251
Number of successful extensions: 469
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 461
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2706104940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)