Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_G11
(943 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 30 2.1
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 30 2.1
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 30 2.1
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 3.6
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 3.6
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 3.6
AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical ... 29 3.6
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 4.8
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = +1
Query: 505 PPPAPRXXXVRLGG-PXXXPPRGXXGXPPDXGXTP 606
P P PR GG PPRG G PP G P
Sbjct: 763 PSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRP 797
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = +1
Query: 505 PPPAPRXXXVRLGG-PXXXPPRGXXGXPPDXGXTP 606
P P PR GG PPRG G PP G P
Sbjct: 763 PSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRP 797
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = +1
Query: 505 PPPAPRXXXVRLGG-PXXXPPRGXXGXPPDXGXTP 606
P P PR GG PPRG G PP G P
Sbjct: 763 PSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRP 797
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = +1
Query: 505 PPPAPRXXXVRLGG-PXXXPPRGXXGXPPDXGXTP 606
P P PR GG PPRG G PP G P
Sbjct: 763 PSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRP 797
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +1
Query: 505 PPPAPRXXXVRLGGPXXXPPRGXXGXPPDXGXTP 606
PPP P GGP PP G G PP G P
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPG--GLPPISGGPP 759
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +1
Query: 505 PPPAPRXXXVRLGGPXXXPPRGXXGXPPDXGXTP 606
PPP P + GGP PP G G PP G P
Sbjct: 713 PPPPPGLPPI-TGGPPPPPPPG--GLPPITGGPP 743
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +1
Query: 505 PPPAPRXXXVRLGGPXXXPPRGXXGXPPDXGXTP 606
PPP P GGP PP G G PP G P
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPG--GLPPISGGPP 759
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +1
Query: 505 PPPAPRXXXVRLGGPXXXPPRGXXGXPPDXGXTP 606
PPP P + GGP PP G G PP G P
Sbjct: 713 PPPPPGLPPI-TGGPPPPPPPG--GLPPITGGPP 743
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +1
Query: 505 PPPAPRXXXVRLGGPXXXPPRGXXGXPPDXGXTP 606
PPP P GGP PP G G PP G P
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPG--GLPPISGGPP 342
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +1
Query: 505 PPPAPRXXXVRLGGPXXXPPRGXXGXPPDXGXTP 606
PPP P + GGP PP G G PP G P
Sbjct: 296 PPPPPGLPPI-TGGPPPPPPPG--GLPPITGGPP 326
>AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical
protein ZK973.9 protein.
Length = 233
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 886 PYPPRGVPXSXAGGPPXP 939
PYPP+G+P G PP P
Sbjct: 199 PYPPQGMPGYPGGPPPPP 216
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = -3
Query: 305 FFPPPXXXGGGPXXPXXXSAXGXHXPXFFGGXPGP 201
F PPP GG P P + P GG P P
Sbjct: 73 FIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPP 107
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,905,633
Number of Sequences: 27780
Number of extensions: 254180
Number of successful extensions: 842
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 805
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2433684176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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