Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_G10
         (909 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    27   1.0  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         26   1.8  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    24   5.5  
AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        24   7.3  
AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A...    24   7.3  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 26.6 bits (56), Expect = 1.0
 Identities = 23/91 (25%), Positives = 39/91 (42%)
 Frame = -2

Query: 506 MLSLHHCANAE*FLISSSMLSTFFVVEIPTLPGAQ*IFFTLGESASFQQRACSRPPPPIT 327
           ML L +  NA   L S    S   +V + +   A  + F +  ++S ++ + +R     T
Sbjct: 285 MLDLLYANNAAAKLCSPVFPSVVPLVPLDSYHPA--LDFNIRINSSTRRNSTTRQNSTTT 342

Query: 326 KTFASDILFRNYTKLKKTFPIFNRFFTCSLF 234
             +  +    +Y KL     +FN  F CS F
Sbjct: 343 ALYRYNFAKADYVKLNDMISMFNNSFHCSNF 373


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 364  WKLADSPNVKKIYCA 408
            W LAD P++K++ CA
Sbjct: 1775 WNLADLPDIKRLSCA 1789


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 658 ISDTDLPDISPSLMLQLP 711
           +SDTD PD+  S+ L +P
Sbjct: 900 LSDTDAPDLLSSISLYVP 917


>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 9/34 (26%), Positives = 19/34 (55%)
 Frame = -3

Query: 634 VLVGLYLCTSFYLAQSTEFHRKLSHLQYHEQEDL 533
           VL+GL   T FY+    +   +   ++ HE++++
Sbjct: 16  VLIGLVSSTGFYIDNGVDQTVREKSVELHERQEI 49


>AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A2
           protein.
          Length = 496

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -1

Query: 360 KSVFPTTSAYYQNVRFRHFI*KLHQIKENFS 268
           KSVFP T++  +  RF +++ ++   K  +S
Sbjct: 236 KSVFPETASNNECARFLYYLGRIKAAKLEYS 266


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 818,856
Number of Sequences: 2352
Number of extensions: 16366
Number of successful extensions: 73
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 73
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 98401338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)