Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_G10
(909 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
J02527-2|AAA28562.1| 434|Drosophila melanogaster Gart polypepti... 122 9e-28
J02527-1|AAA28563.1| 1353|Drosophila melanogaster Gart polypepti... 122 9e-28
AE014134-1214|AAX52661.1| 434|Drosophila melanogaster CG31628-P... 122 9e-28
AE014134-1213|AAF52474.2| 1353|Drosophila melanogaster CG31628-P... 122 9e-28
X00041-1|CAA24923.1| 1089|Drosophila melanogaster GART protein. 63 6e-10
M59077-1|AAA28680.1| 1302|Drosophila melanogaster P-glycoprotein... 29 8.8
AY121669-1|AAM51996.1| 1302|Drosophila melanogaster RE14657p pro... 29 8.8
AF251287-1|AAF69147.1| 1302|Drosophila melanogaster P-glycoprote... 29 8.8
AF251286-1|AAF69146.1| 1302|Drosophila melanogaster P-glycoprote... 29 8.8
AE014296-1105|AAF50669.1| 1302|Drosophila melanogaster CG10181-P... 29 8.8
>J02527-2|AAA28562.1| 434|Drosophila melanogaster Gart polypeptide
1.7 kb transcript protein.
Length = 434
Score = 122 bits (293), Expect = 9e-28
Identities = 57/97 (58%), Positives = 71/97 (73%), Gaps = 3/97 (3%)
Frame = +1
Query: 322 VLVIGGGGREHALCWKLADSPNVKKIYCAPGSVGISTTKKVESIE---LDIKNYSALAQW 492
VLVIG GGREHA+CWKL+ SP V +IY PGS GI +K +++ LD K++ A+A+W
Sbjct: 5 VLVIGSGGREHAICWKLSQSPKVAQIYALPGSHGIQLVEKCRNLDAKTLDPKDFEAIAKW 64
Query: 493 CKDNIIDLVVIGPEDPLAHGIVDGLVSYGIPCFGPNK 603
K+N I LVV+GPEDPLA G+ D L S GIPCFGP K
Sbjct: 65 SKENQIALVVVGPEDPLALGLGDVLQSAGIPCFGPGK 101
Score = 37.5 bits (83), Expect = 0.025
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +2
Query: 593 GQIKAGAQIEANKDWAKRFMNKYQIPTCQ 679
G K GAQIEA+K WAK FM ++ IPT +
Sbjct: 98 GPGKQGAQIEADKKWAKDFMLRHGIPTAR 126
>J02527-1|AAA28563.1| 1353|Drosophila melanogaster Gart polypeptide
4.7 kb transcript protein.
Length = 1353
Score = 122 bits (293), Expect = 9e-28
Identities = 57/97 (58%), Positives = 71/97 (73%), Gaps = 3/97 (3%)
Frame = +1
Query: 322 VLVIGGGGREHALCWKLADSPNVKKIYCAPGSVGISTTKKVESIE---LDIKNYSALAQW 492
VLVIG GGREHA+CWKL+ SP V +IY PGS GI +K +++ LD K++ A+A+W
Sbjct: 5 VLVIGSGGREHAICWKLSQSPKVAQIYALPGSHGIQLVEKCRNLDAKTLDPKDFEAIAKW 64
Query: 493 CKDNIIDLVVIGPEDPLAHGIVDGLVSYGIPCFGPNK 603
K+N I LVV+GPEDPLA G+ D L S GIPCFGP K
Sbjct: 65 SKENQIALVVVGPEDPLALGLGDVLQSAGIPCFGPGK 101
Score = 37.5 bits (83), Expect = 0.025
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +2
Query: 593 GQIKAGAQIEANKDWAKRFMNKYQIPTCQ 679
G K GAQIEA+K WAK FM ++ IPT +
Sbjct: 98 GPGKQGAQIEADKKWAKDFMLRHGIPTAR 126
>AE014134-1214|AAX52661.1| 434|Drosophila melanogaster CG31628-PB,
isoform B protein.
Length = 434
Score = 122 bits (293), Expect = 9e-28
Identities = 57/97 (58%), Positives = 71/97 (73%), Gaps = 3/97 (3%)
Frame = +1
Query: 322 VLVIGGGGREHALCWKLADSPNVKKIYCAPGSVGISTTKKVESIE---LDIKNYSALAQW 492
VLVIG GGREHA+CWKL+ SP V +IY PGS GI +K +++ LD K++ A+A+W
Sbjct: 5 VLVIGSGGREHAICWKLSQSPKVAQIYALPGSHGIQLVEKCRNLDAKTLDPKDFEAIAKW 64
Query: 493 CKDNIIDLVVIGPEDPLAHGIVDGLVSYGIPCFGPNK 603
K+N I LVV+GPEDPLA G+ D L S GIPCFGP K
Sbjct: 65 SKENQIALVVVGPEDPLALGLGDVLQSAGIPCFGPGK 101
Score = 37.5 bits (83), Expect = 0.025
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +2
Query: 593 GQIKAGAQIEANKDWAKRFMNKYQIPTCQ 679
G K GAQIEA+K WAK FM ++ IPT +
Sbjct: 98 GPGKQGAQIEADKKWAKDFMLRHGIPTAR 126
>AE014134-1213|AAF52474.2| 1353|Drosophila melanogaster CG31628-PA,
isoform A protein.
Length = 1353
Score = 122 bits (293), Expect = 9e-28
Identities = 57/97 (58%), Positives = 71/97 (73%), Gaps = 3/97 (3%)
Frame = +1
Query: 322 VLVIGGGGREHALCWKLADSPNVKKIYCAPGSVGISTTKKVESIE---LDIKNYSALAQW 492
VLVIG GGREHA+CWKL+ SP V +IY PGS GI +K +++ LD K++ A+A+W
Sbjct: 5 VLVIGSGGREHAICWKLSQSPKVAQIYALPGSHGIQLVEKCRNLDAKTLDPKDFEAIAKW 64
Query: 493 CKDNIIDLVVIGPEDPLAHGIVDGLVSYGIPCFGPNK 603
K+N I LVV+GPEDPLA G+ D L S GIPCFGP K
Sbjct: 65 SKENQIALVVVGPEDPLALGLGDVLQSAGIPCFGPGK 101
Score = 37.5 bits (83), Expect = 0.025
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +2
Query: 593 GQIKAGAQIEANKDWAKRFMNKYQIPTCQ 679
G K GAQIEA+K WAK FM ++ IPT +
Sbjct: 98 GPGKQGAQIEADKKWAKDFMLRHGIPTAR 126
>X00041-1|CAA24923.1| 1089|Drosophila melanogaster GART protein.
Length = 1089
Score = 62.9 bits (146), Expect = 6e-10
Identities = 28/42 (66%), Positives = 33/42 (78%)
Frame = +1
Query: 478 ALAQWCKDNIIDLVVIGPEDPLAHGIVDGLVSYGIPCFGPNK 603
A+A+W K+N I LVV+GPEDPLA G+ D L S GIPCFGP K
Sbjct: 1 AIAKWSKENQIALVVVGPEDPLALGLGDVLQSAGIPCFGPGK 42
Score = 37.5 bits (83), Expect = 0.025
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +2
Query: 593 GQIKAGAQIEANKDWAKRFMNKYQIPTCQ 679
G K GAQIEA+K WAK FM ++ IPT +
Sbjct: 39 GPGKQGAQIEADKKWAKDFMLRHGIPTAR 67
>M59077-1|AAA28680.1| 1302|Drosophila melanogaster P-glycoprotein
protein.
Length = 1302
Score = 29.1 bits (62), Expect = 8.8
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 454 ELDIKNYSALAQWCKDNIIDLVVIGPEDPLAHGIVDGLVSYGIP 585
+LDI+ Y+ QW + NI V+G E L G + +SYG P
Sbjct: 468 DLDIRKYNI--QWLRSNI---AVVGQEPVLFLGTIAQNISYGKP 506
>AY121669-1|AAM51996.1| 1302|Drosophila melanogaster RE14657p
protein.
Length = 1302
Score = 29.1 bits (62), Expect = 8.8
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 454 ELDIKNYSALAQWCKDNIIDLVVIGPEDPLAHGIVDGLVSYGIP 585
+LDI+ Y+ QW + NI V+G E L G + +SYG P
Sbjct: 468 DLDIRKYNI--QWLRSNI---AVVGQEPVLFLGTIAQNISYGKP 506
>AF251287-1|AAF69147.1| 1302|Drosophila melanogaster P-glycoprotein
protein.
Length = 1302
Score = 29.1 bits (62), Expect = 8.8
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 454 ELDIKNYSALAQWCKDNIIDLVVIGPEDPLAHGIVDGLVSYGIP 585
+LDI+ Y+ QW + NI V+G E L G + +SYG P
Sbjct: 468 DLDIRKYNI--QWLRSNI---AVVGQEPVLFLGTIAQNISYGKP 506
>AF251286-1|AAF69146.1| 1302|Drosophila melanogaster P-glycoprotein
protein.
Length = 1302
Score = 29.1 bits (62), Expect = 8.8
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 454 ELDIKNYSALAQWCKDNIIDLVVIGPEDPLAHGIVDGLVSYGIP 585
+LDI+ Y+ QW + NI V+G E L G + +SYG P
Sbjct: 468 DLDIRKYNI--QWLRSNI---AVVGQEPVLFLGTIAQNISYGKP 506
>AE014296-1105|AAF50669.1| 1302|Drosophila melanogaster CG10181-PA
protein.
Length = 1302
Score = 29.1 bits (62), Expect = 8.8
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 454 ELDIKNYSALAQWCKDNIIDLVVIGPEDPLAHGIVDGLVSYGIP 585
+LDI+ Y+ QW + NI V+G E L G + +SYG P
Sbjct: 468 DLDIRKYNI--QWLRSNI---AVVGQEPVLFLGTIAQNISYGKP 506
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,097,979
Number of Sequences: 53049
Number of extensions: 719141
Number of successful extensions: 1944
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1940
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4443987051
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -