Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_G03
(921 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 44 2e-05
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 35 0.014
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 35 0.019
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.075
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 33 0.075
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 32 0.100
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.40
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 0.70
SPAC26A3.08 |smb1|smb|Sm snRNP core protein Smb1|Schizosaccharom... 27 4.9
SPAC6C3.02c |||CHCH domain protein|Schizosaccharomyces pombe|chr... 26 6.5
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 26 6.5
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 6.5
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 44.4 bits (100), Expect = 2e-05
Identities = 50/204 (24%), Positives = 56/204 (27%), Gaps = 3/204 (1%)
Frame = +3
Query: 252 PXQGTAPSVXXXXTTKPXXKKNXXPPPXPXGXPPPDPXKEXXPRGAPPNXPPXXGXAXXP 431
P TAP V +T P K + P P P P P E AP PP + P
Sbjct: 1035 PVPSTAPPVPIPTSTPPVPKSSSGAPSAP--PPVPAPSSEIPSIPAPSGAPPVPAPSGIP 1092
Query: 432 PXXGXPSQGGGGXXXXXXXXISPXXKXXKKKXXXSXXKXXXPXXXXGGHPP---PXXXPP 602
P PS + P P G PP P P
Sbjct: 1093 PVP-KPSV-AAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAP 1150
Query: 603 PPGXXAXKXPPPPXGXXXNPPPGPXGXXPPKXKKXXPXXXXXXXXXXXXXXXXXXXXXGX 782
P + P P P P P PP K P G
Sbjct: 1151 PVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPK---PAAGVPPVPPPSEAPPVPKPSVG- 1206
Query: 783 XPPXXPPXFSPPPXXSXAXXGXPP 854
PP PP +PP A G PP
Sbjct: 1207 VPPVPPPSTAPPVPTPSA--GLPP 1228
Score = 36.7 bits (81), Expect = 0.005
Identities = 32/123 (26%), Positives = 33/123 (26%), Gaps = 1/123 (0%)
Frame = +3
Query: 324 PPPXPXGXPP-PDPXKEXXPRGAPPNXPPXXGXAXXPPXXGXPSQGGGGXXXXXXXXISP 500
P P P G PP P P P AP PP + P PS G P
Sbjct: 1132 PVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSG-------IPPVPKP 1184
Query: 501 XXKXXKKKXXXSXXKXXXPXXXXGGHPPPXXXPPPPGXXAXKXPPPPXGXXXNPPPGPXG 680
P PPP PP P A P P P P P
Sbjct: 1185 AAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSS 1244
Query: 681 XXP 689
P
Sbjct: 1245 EAP 1247
Score = 33.5 bits (73), Expect = 0.043
Identities = 51/226 (22%), Positives = 56/226 (24%), Gaps = 18/226 (7%)
Frame = +3
Query: 231 PGSXXVAPXQGTAPSVXXXXTTK-PXXKKNXXPPPXPXGXPPPDPXKE-----XXPRGAP 392
P S ++ T+P+ P P P P PP P P P
Sbjct: 991 PPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTP 1050
Query: 393 PNXPPXXGXAXXPPXXGXPSQ-------GGGGXXXXXXXXISPXXKXXKKKXXXSXXKXX 551
P G PP PS G I P K
Sbjct: 1051 PVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVA 1110
Query: 552 XPXXXXGGHPPPXXXP---PPPGXXAXKXPPPPXGXXXNPP-PGPXGXXPPKXKKXXPXX 719
P PP P PP PP P PP P P G PP K P
Sbjct: 1111 VPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSG-APPVPK---PSV 1166
Query: 720 XXXXXXXXXXXXXXXXXXXGXXPPXXPPXFSPP-PXXSXAXXGXPP 854
PP PP +PP P S PP
Sbjct: 1167 AAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPP 1212
Score = 33.5 bits (73), Expect = 0.043
Identities = 37/146 (25%), Positives = 38/146 (26%), Gaps = 5/146 (3%)
Frame = +3
Query: 270 PSVXXXXTTKPXXKKNXXPPPXPXGXPP-PDPXKEXXPRGAPPNXPPXXGXAXXPPXXGX 446
PSV KP P P P G PP P P P P PP + P
Sbjct: 1097 PSVAAPPVPKPSVA--VPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPA 1154
Query: 447 PSQGGGGXXXXXXXXISPXXKXXKKKXXXSXXKXXXPXXXXGGHPPPXXXPP---PPGXX 617
PS G P P PP P PP
Sbjct: 1155 PS--GAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPP 1212
Query: 618 AXKXPPPPXGXXXNPP-PGPXGXXPP 692
PP P PP P P PP
Sbjct: 1213 PSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Score = 32.3 bits (70), Expect = 0.100
Identities = 33/120 (27%), Positives = 33/120 (27%), Gaps = 4/120 (3%)
Frame = +1
Query: 556 PXXXGGATPPXXXXPPPRGXGPKXXPPPPGGXXXIPP-PXPXGXPP-PKXKKXXXXXGGE 729
P G P P P PP P PP P P G PP PK
Sbjct: 1115 PAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAP 1174
Query: 730 QXXXXXRGPXXXPPPXXXPPPXXPXXFPPHPXXXXXXGXPPXXXXXXXXXXPXP--GGPP 903
P P PP P PP P G PP P P G PP
Sbjct: 1175 SSGI----PPVPKPAAGVPPVPPPSEAPPVP--KPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 35.1 bits (77), Expect = 0.014
Identities = 17/33 (51%), Positives = 18/33 (54%)
Frame = +3
Query: 573 GHPPPXXXPPPPGXXAXKXPPPPXGXXXNPPPG 671
G+PPP PPPPG PPPP PPPG
Sbjct: 7 GNPPPP--PPPPGFEPPSQPPPP------PPPG 31
Score = 31.1 bits (67), Expect = 0.23
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +2
Query: 569 GGPPPPXXXPPPPGXXGXKXTPPP 640
G PPPP PPPPG PPP
Sbjct: 7 GNPPPP---PPPPGFEPPSQPPPP 27
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +3
Query: 603 PPGXXAXKXPPPPXGXXXNPPPGPXGXXPPKXKKXXP 713
PPG PPP PPP P K K P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPGYVKKRKNKTP 41
Score = 26.2 bits (55), Expect = 6.5
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +2
Query: 335 PXGXTPPRPXKGXXPQGGPPQXPP 406
P PP P G P PP PP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPP 29
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 34.7 bits (76), Expect = 0.019
Identities = 19/41 (46%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +1
Query: 574 ATPPXXXXPP-PRGXGPKXXPPPPGGXXXIPPPXPXGXPPP 693
A P PP P GP PPPPG PPP P PPP
Sbjct: 745 APAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP--PPPP 783
Score = 34.7 bits (76), Expect = 0.019
Identities = 18/38 (47%), Positives = 18/38 (47%)
Frame = +3
Query: 555 PXXXXGGHPPPXXXPPPPGXXAXKXPPPPXGXXXNPPP 668
P GG PPP PPPPG PPPP PPP
Sbjct: 754 PAPIMGGPPPP---PPPPGVAGAGPPPPPP-----PPP 783
Score = 33.1 bits (72), Expect = 0.057
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = +3
Query: 324 PPPXPXGXPPPDPXKEXXPRGAPPNXPPXXGXAXXPPXXGXPSQGGGG 467
P P P PPP P P PP P G PP P+ GG
Sbjct: 744 PAPAPIPVPPPAPIMGGPP--PPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Score = 32.7 bits (71), Expect = 0.075
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +3
Query: 579 PPPXXXPPPPGXXAXKXPPPPXGXXXNPPPGPXGXXPPKXKKXXP 713
P P P PP PPPP PPPG G PP P
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPP-----PPPGVAGAGPPPPPPPPP 783
Score = 31.5 bits (68), Expect = 0.17
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +1
Query: 631 PPPPGGXXXIPPPXPXGXPPPKXKKXXXXXGGEQXXXXXRGPXXXPPPXXXPPP 792
PPPP P P P PPP GG G PP PPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPP-----APIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 29.1 bits (62), Expect = 0.93
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Frame = +3
Query: 579 PPPXXXPPPPGXXAXKXPPP-PXGXXXNPPPGPXG 680
PPP P P PPP P PPP P G
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPG 769
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 320 PPPXXPXGXTPPRPXKGXXPQGGPPQXPP 406
PPP G PP P GPP PP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 600 PPPGXXAXKXPPPPXGXXXNPPPGPXGXXPP 692
PPP A P P PPP P PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPP 762
Score = 26.6 bits (56), Expect = 4.9
Identities = 21/66 (31%), Positives = 22/66 (33%), Gaps = 1/66 (1%)
Frame = +1
Query: 598 PPPRGXGPKXXPPPPGGXXXIPPPXPX-GXPPPKXKKXXXXXGGEQXXXXXRGPXXXPPP 774
PPP P P P +PPP P G PPP G PPP
Sbjct: 735 PPPAVIVPTPAPAP----IPVPPPAPIMGGPPPPPPPPGVAGAG-------------PPP 777
Query: 775 XXXPPP 792
PPP
Sbjct: 778 PPPPPP 783
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Frame = +2
Query: 554 PPXXXG-GPPPPXXXPPPPGXXGXKXTPP 637
PP G GPPPP PP G + P
Sbjct: 767 PPGVAGAGPPPPPPPPPAVSAGGSRYYAP 795
Score = 26.2 bits (55), Expect = 6.5
Identities = 17/56 (30%), Positives = 18/56 (32%), Gaps = 5/56 (8%)
Frame = +1
Query: 580 PPXXXXPPPRGXGPKXXPPPPGGXXXIPPPXP-----XGXPPPKXKKXXXXXGGEQ 732
PP P P PP P PPP P G PPP GG +
Sbjct: 736 PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSR 791
Score = 25.8 bits (54), Expect = 8.6
Identities = 16/59 (27%), Positives = 17/59 (28%)
Frame = +1
Query: 727 EQXXXXXRGPXXXPPPXXXPPPXXPXXFPPHPXXXXXXGXPPXXXXXXXXXXPXPGGPP 903
EQ + P PP P P P P P G PP P PP
Sbjct: 723 EQQKLLLKSPPPPPPAVIVPTP-APAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 32.7 bits (71), Expect = 0.075
Identities = 20/68 (29%), Positives = 24/68 (35%)
Frame = +3
Query: 246 VAPXQGTAPSVXXXXTTKPXXKKNXXPPPXPXGXPPPDPXKEXXPRGAPPNXPPXXGXAX 425
+AP + + P PPP P PPP P P G PP+ PP A
Sbjct: 1681 MAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPP-PSAPPMPAG-PPSAPPPPLPAS 1738
Query: 426 XPPXXGXP 449
P P
Sbjct: 1739 SAPSVPNP 1746
Score = 31.1 bits (67), Expect = 0.23
Identities = 19/58 (32%), Positives = 23/58 (39%)
Frame = +3
Query: 261 GTAPSVXXXXTTKPXXKKNXXPPPXPXGXPPPDPXKEXXPRGAPPNXPPXXGXAXXPP 434
G AP+ +T P ++ PP PPP P P APP P A PP
Sbjct: 1680 GMAPA--HPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPP-MPAGPPSAPPPP 1734
Score = 30.7 bits (66), Expect = 0.30
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = +1
Query: 541 PXKXXPXXXGGATPPXXXXPPPRGXGPKXXPPPPGGXXXIPPPXPXGXPPP 693
P P A PP P P P PPPP +P P PPP
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTP-PPPPMSVPPPPSA-PPMPAGPPSAPPPP 1734
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/38 (36%), Positives = 14/38 (36%), Gaps = 2/38 (5%)
Frame = +2
Query: 530 PXXXQXKXPPXXXGG--PPPPXXXPPPPGXXGXKXTPP 637
P Q PP PPPP PPPP PP
Sbjct: 1691 PVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPP 1728
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +1
Query: 580 PPXXXXPPPRGXGPKXXPPPPGGXXXIPPPXPXGXPP 690
PP PPP P P P G PPP P P
Sbjct: 1709 PPPMSVPPP----PSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 26.2 bits (55), Expect = 6.5
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +2
Query: 530 PXXXQXKXPPXXXGGPPPPXXXPPPPGXXGXKXTPPP 640
P PP PPP PP P G PPP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPA--GPPSAPPP 1733
Score = 26.2 bits (55), Expect = 6.5
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +2
Query: 554 PPXXXGGPPPPXXXPPPPGXXGXKXTPPP 640
PP PPPP P P G P P
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 25.8 bits (54), Expect = 8.6
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +3
Query: 579 PPPXXXPPPPGXXAXKXPPPPXGXXXNPPP 668
PPP PP A PP P G PPP
Sbjct: 1707 PPPPPMSVPPPPSA---PPMPAGPPSAPPP 1733
Score = 25.8 bits (54), Expect = 8.6
Identities = 11/32 (34%), Positives = 11/32 (34%)
Frame = +3
Query: 579 PPPXXXPPPPGXXAXKXPPPPXGXXXNPPPGP 674
PPP PP P PPP P P
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 32.7 bits (71), Expect = 0.075
Identities = 20/54 (37%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Frame = -3
Query: 466 PPPP--WEGXPXXGGXXAXPXXGGXLGGAPLGXXSFXGSGGGXPXGXGGGXXFF 311
PP P + G GG G GG P G G GG P G GGG F
Sbjct: 201 PPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGF 254
Score = 31.1 bits (67), Expect = 0.23
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -3
Query: 433 GGXXAXPXXGGXLGGAPLGXXSFXGSGGGXPXGXGGG 323
GG G GG P G G GG P G GGG
Sbjct: 228 GGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGG 264
Score = 27.5 bits (58), Expect = 2.8
Identities = 24/81 (29%), Positives = 24/81 (29%)
Frame = -3
Query: 820 GGGEXXGGXWGGXXPXXXXXXXXXXXXXXXXXXXXXGXXFXXLGGXXPXGPGGGFXXXPX 641
GG GG GG P G GG GPGG F P
Sbjct: 188 GGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFE-GGPGG-FGGGPG 245
Query: 640 GGGGXFXAXXPGGGGXXXGGG 578
G GG G GG G G
Sbjct: 246 GFGGGLGGFGGGPGGFGGGPG 266
Score = 27.1 bits (57), Expect = 3.7
Identities = 20/47 (42%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = -3
Query: 463 PPPWEGXPXXGGXXAXPXX-GGXLGGAPLGXXSFXGSGGGXPXGXGG 326
P +EG P GG P GG LGG G F GG P G GG
Sbjct: 230 PGGFEGGP--GGFGGGPGGFGGGLGGFGGGPGGF----GGGPGGHGG 270
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -1
Query: 639 GGGVXFXPXXPGGGGXXXGGGGPPXXXGG 553
GGG P PGG G G GG GG
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGG 222
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 32.3 bits (70), Expect = 0.100
Identities = 38/176 (21%), Positives = 45/176 (25%), Gaps = 13/176 (7%)
Frame = +3
Query: 348 PPPDPXKEXXPRGAPPNXPPXXGXAXXPPXXGXPSQGGGGXXXXXXXXISPXXKXXKKKX 527
PPP P RG PP + PP S G +P +
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Query: 528 XXSXXKXXXPXXXXGGHPPPXXXPPP--PGXXAXKXPP---------PPXGXXXNPPPGP 674
+PP PPP PG A PP PP + PP
Sbjct: 371 STGRQPPPLSSSRAVSNPP---APPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSA 427
Query: 675 XGXXPPKXKKXXPXXXXXXXXXXXXXXXXXXXXXG--XXPPXXPPXFSPPPXXSXA 836
PP P G PP P +PPP + A
Sbjct: 428 PPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPA 483
Score = 31.9 bits (69), Expect = 0.13
Identities = 28/114 (24%), Positives = 29/114 (25%), Gaps = 12/114 (10%)
Frame = +1
Query: 598 PPPRGXGPKXXPPPPGGXXXIPPPXPXGXP-----PP--KXKKXXXXXGGEQXXXXXRGP 756
PPPR P PP G PPP P P PP + R
Sbjct: 341 PPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSA 400
Query: 757 XXXPP-----PXXXPPPXXPXXFPPHPXXXXXXGXPPXXXXXXXXXXPXPGGPP 903
PP PP P PP PP P P P
Sbjct: 401 PALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAP 454
Score = 31.5 bits (68), Expect = 0.17
Identities = 33/137 (24%), Positives = 36/137 (26%), Gaps = 21/137 (15%)
Frame = +3
Query: 327 PPXPXGXP---PPDPXKEXXPRGAPPNXPPXXGXAXXPPXXG----XPSQGGGGXXXXXX 485
PP P P PP+ PP PP G PP P
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSK 289
Query: 486 XXISPXXKXXKKKXXXSXXKXXXPXXXXG----GHPP----------PXXXPPPPGXXAX 623
+ P + K P G PP P PPP A
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAG 349
Query: 624 KXPPPPXGXXXNPPPGP 674
P PP G PPP P
Sbjct: 350 SIPLPPQGRSAPPPPPP 366
Score = 31.5 bits (68), Expect = 0.17
Identities = 33/149 (22%), Positives = 37/149 (24%), Gaps = 11/149 (7%)
Frame = +3
Query: 300 PXXKKNXXPPPXPXGX-----PPPDPXKEXXPRGAPPNXPPXXGXAXXPPXXGXPSQGGG 464
P ++N PP G PPP P G+ P P PP PS G
Sbjct: 316 PPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQ 375
Query: 465 GXXXXXXXXISPXXKXXKKKXXXSXXKXXXPXXXXGGHPPPXXXPP------PPGXXAXK 626
+S S PP PP PP
Sbjct: 376 PPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSA 435
Query: 627 XPPPPXGXXXNPPPGPXGXXPPKXKKXXP 713
P P G PP P P P
Sbjct: 436 PPSLPMGAPAAPPLPPSAPIAPPLPAGMP 464
Score = 30.3 bits (65), Expect = 0.40
Identities = 23/95 (24%), Positives = 25/95 (26%), Gaps = 1/95 (1%)
Frame = +1
Query: 535 RXPXKXXPXXXGGATPPXXXXPPPRGXGPKXXPPPPGGXXXIP-PPXPXGXPPPKXKKXX 711
R P P PP P PP IP PP PPP +
Sbjct: 310 RPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSA 369
Query: 712 XXXGGEQXXXXXRGPXXXPPPXXXPPPXXPXXFPP 816
G + PP PPP P P
Sbjct: 370 PSTGRQPPPLSSSRAVSNPP---APPPAIPGRSAP 401
Score = 29.9 bits (64), Expect = 0.53
Identities = 31/132 (23%), Positives = 34/132 (25%), Gaps = 3/132 (2%)
Frame = +3
Query: 327 PPXPXGXPPPDPXKEXXPRGAPPNXPPXXGXAXXPPXXGXPSQGGGGXXXXXXXXISPXX 506
PP PPP P + G P P A P P+ G +
Sbjct: 354 PPQGRSAPPPPPPRSAPSTGRQP-PPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRT 412
Query: 507 KXXKKKXXXSXXKXXXPXXXXGGHPP-PXXXP--PPPGXXAXKXPPPPXGXXXNPPPGPX 677
S P P P P PP A PP P G PP P
Sbjct: 413 STPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPA 472
Query: 678 GXXPPKXKKXXP 713
PP P
Sbjct: 473 APAPPPAPAPAP 484
Score = 28.3 bits (60), Expect = 1.6
Identities = 30/137 (21%), Positives = 32/137 (23%), Gaps = 7/137 (5%)
Frame = +3
Query: 300 PXXKKNXXPPPXPXGXPP----PDPXKEXXPRGAPPNXPPXXGXAXXPPXXGXPSQGGGG 467
P ++ PPP P P P P PP PP P P G
Sbjct: 354 PPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAP---ALPPLGNAS 410
Query: 468 XXXXXXXXISPXXKXXKKKXXXSXXKXXXPXXXXGGHPPPXXXP--PP-PGXXAXKXPPP 638
P P P P P PP P P P
Sbjct: 411 RTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLP 470
Query: 639 PXGXXXNPPPGPXGXXP 689
P P P P P
Sbjct: 471 PAAPAPPPAPAPAPAAP 487
Score = 26.2 bits (55), Expect = 6.5
Identities = 15/48 (31%), Positives = 16/48 (33%)
Frame = +3
Query: 291 TTKPXXKKNXXPPPXPXGXPPPDPXKEXXPRGAPPNXPPXXGXAXXPP 434
+T P PP P PP P P GAP P PP
Sbjct: 413 STPPVPTPPSLPPSAPPSLPPSAPPS--LPMGAPAAPPLPPSAPIAPP 458
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 30.3 bits (65), Expect = 0.40
Identities = 20/77 (25%), Positives = 21/77 (27%), Gaps = 2/77 (2%)
Frame = +3
Query: 228 GPGSXXVAPXQGTAPSVXXXXTTKPXXK--KNXXPPPXPXGXPPPDPXKEXXPRGAPPNX 401
G S AP AP P + PPP P PP P PP
Sbjct: 116 GKSSASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPA 175
Query: 402 PPXXGXAXXPPXXGXPS 452
P P PS
Sbjct: 176 QPAAPVKSPPSAPSLPS 192
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/47 (31%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
Frame = +1
Query: 556 PXXXGGATP-PXXXXPPPRGXGPKXXPPPPGGXXXIPPPXPXGXPPP 693
P A P P PP + P PP PP P PPP
Sbjct: 158 PPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.5 bits (63), Expect = 0.70
Identities = 22/85 (25%), Positives = 24/85 (28%), Gaps = 2/85 (2%)
Frame = +1
Query: 574 ATPPXXXXPPPRGXGPKXXPPPPGGXXXIPPPXPXGXPPPKXKKXXXXXGGEQXXXXXRG 753
+ P PPP P P PP P PPP + E G
Sbjct: 159 SAPNSMVSPPPSFQPPSAAAPATSLPSDYNPPPP--PPPPPAVEDQAADANEPDDYYSSG 216
Query: 754 PXXXP--PPXXXPPPXXPXXFPPHP 822
P PP P P PP P
Sbjct: 217 RAVSPEIPPTYTPKQADPLPAPPPP 241
Score = 26.6 bits (56), Expect = 4.9
Identities = 17/67 (25%), Positives = 22/67 (32%), Gaps = 8/67 (11%)
Frame = +3
Query: 258 QGTAPSVXXXXTTKPXXKKNXXPPPXPXGXPP--------PDPXKEXXPRGAPPNXPPXX 413
+ +P + T K PPP P PP P P + G+ N PP
Sbjct: 217 RAVSPEIPPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPP 276
Query: 414 GXAXXPP 434
PP
Sbjct: 277 ATPSQPP 283
>SPAC26A3.08 |smb1|smb|Sm snRNP core protein
Smb1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 147
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +1
Query: 583 PXXXXPPPRGXGPKXXPPPPGGXXXIPPP 669
P P RG G PPP G PPP
Sbjct: 114 PVGLAGPVRGVGYTAPPPPAGFGRGAPPP 142
>SPAC6C3.02c |||CHCH domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 172
Score = 26.2 bits (55), Expect = 6.5
Identities = 11/33 (33%), Positives = 12/33 (36%)
Frame = +3
Query: 582 PPXXXPPPPGXXAXKXPPPPXGXXXNPPPGPXG 680
PP PPP + PPP PG G
Sbjct: 27 PPRTMAPPPAPSRVQQAPPPTAVQGGSSPGFFG 59
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 26.2 bits (55), Expect = 6.5
Identities = 14/46 (30%), Positives = 16/46 (34%), Gaps = 1/46 (2%)
Frame = +3
Query: 579 PPPXXXPPPPGXXAXKXPPPPX-GXXXNPPPGPXGXXPPKXKKXXP 713
PPP A PPPP G +PP PP + P
Sbjct: 909 PPPPTASMTASAPAIASPPPPKVGETYHPPTASGTRVPPVQQPSHP 954
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 26.2 bits (55), Expect = 6.5
Identities = 11/33 (33%), Positives = 11/33 (33%)
Frame = +3
Query: 324 PPPXPXGXPPPDPXKEXXPRGAPPNXPPXXGXA 422
PPP P P P PP PP A
Sbjct: 1883 PPPPPMALPKAGPPSAAPTSALPPAGPPAGATA 1915
Score = 25.8 bits (54), Expect = 8.6
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = -3
Query: 466 PPPPWEGXPXXGGXXAXPXXGGXLGGAPLGXXSFXGSGG 350
PPPP P G A P G P G + G+ G
Sbjct: 1883 PPPPPMALPKAGPPSAAPTSALPPAGPPAGATAISGNPG 1921
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.154 0.581
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,974,563
Number of Sequences: 5004
Number of extensions: 35826
Number of successful extensions: 419
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 205
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 468512460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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