Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_G02
         (855 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    32   0.026
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    26   1.3  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   2.2  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          25   3.9  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    25   3.9  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           24   5.1  
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    24   6.8  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 31.9 bits (69), Expect = 0.026
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
 Frame = +3

Query: 123 HWCETCDRGFPNAVILEKHKNQH-----EKC-NIDGCGFVAHPKIITKHIQMQHS 269
           H C  C+RGF     L+ H N H      +C + D C F    ++I +HI+ +H+
Sbjct: 155 HKCVVCERGFKTLASLQNHVNTHTGTKPHRCKHCDNC-FTTSGELI-RHIRYRHT 207



 Score = 28.7 bits (61), Expect = 0.24
 Identities = 11/43 (25%), Positives = 19/43 (44%)
 Frame = +3

Query: 129 CETCDRGFPNAVILEKHKNQHEKCNIDGCGFVAHPKIITKHIQ 257
           C+ CD  FP+    + H   HE      C +  +  I  +H++
Sbjct: 329 CKRCDSTFPDRYSYKMHAKTHEGEKCYRCEYCPYASISMRHLE 371


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -3

Query: 694 SVSIISSGVTLSDRISWIP 638
           S SI   GVTL D++SW+P
Sbjct: 727 SRSIRYLGVTLQDKLSWLP 745


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 19/85 (22%), Positives = 34/85 (40%), Gaps = 1/85 (1%)
 Frame = +3

Query: 294 KLNNPEEIKTWREERRRNYPTQANIEK-KAAMVREKIERGEKMGLSRDKNMFDNKKSGMN 470
           KL         REE R     +A IE+ K   +RE+ ER ++    R+K   + ++    
Sbjct: 442 KLEEEHRAARLREEERAREAREAAIEREKERELREQREREQREKEQREKEQREKEERERQ 501

Query: 471 RKYNSDNRKFNNKCELNRRKPIEHK 545
           ++      +   + E  R    E +
Sbjct: 502 QREKEQREREQREKEREREAARERE 526


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 15/56 (26%), Positives = 23/56 (41%)
 Frame = +3

Query: 327 REERRRNYPTQANIEKKAAMVREKIERGEKMGLSRDKNMFDNKKSGMNRKYNSDNR 494
           R   RRN P      +     R+  +RG+K     D+     ++S  NR  N  +R
Sbjct: 507 RPRARRNPPATTRPVRHRPTRRKSTKRGKKDDKGYDRRSGKEERSNDNRYTNGADR 562


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +3

Query: 75  SSWSNQTQSNIDRNEEHWCETCDRGFPNAVILEKH 179
           S +S  + SN ++++E W    D G P  V    H
Sbjct: 510 SGYSIVSTSNFNKHKEKWTAISDTGVPVDVKYNSH 544


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -3

Query: 673 GVTLSDRISWIP 638
           GVTL D +SW+P
Sbjct: 801 GVTLHDHLSWLP 812


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 582 KKTKVLPVLDDKRSIXPF 635
           K+T VLP L D+ ++ PF
Sbjct: 18  KRTMVLPKLKDETAVMPF 35


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 817,544
Number of Sequences: 2352
Number of extensions: 16604
Number of successful extensions: 39
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90959220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)