Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_F24
(1033 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 53 8e-08
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 34 0.028
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 32 0.11
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 31 0.20
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 25 0.24
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 26 0.30
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.46
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 25 1.1
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 27 5.7
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 26 7.5
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 26 10.0
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 52.8 bits (121), Expect = 8e-08
Identities = 48/181 (26%), Positives = 54/181 (29%), Gaps = 12/181 (6%)
Frame = +2
Query: 356 ARVXGAXXPRPPXPXXPXRXSSXSXPXGGGGGGXAXPXXAPXXPXXXGGXAXRXXRPXXX 535
A A RPP P P R + P G G + P P G +
Sbjct: 301 AAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSA 360
Query: 536 XXXPXGPRAPR--XXXPXXXAXRXXXPPPXXXXAXPGXSA------XXAARAXAPPPXXP 691
P AP P + R PP A PG SA A+R PP P
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTP 420
Query: 692 P--PPXRXXAWXPXAPXPXPXXXXVWXXXGXXXP--PPAXWAXXXXXPPPPRAPXXRXRP 859
P PP + P AP P P PP P PP AP P
Sbjct: 421 PSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Query: 860 A 862
A
Sbjct: 481 A 481
Score = 33.1 bits (72), Expect = 0.066
Identities = 36/131 (27%), Positives = 41/131 (31%), Gaps = 8/131 (6%)
Frame = +2
Query: 545 PXGPRAPRXXXPXXXAXRXXXPPPXXXXAXPGXSAXXAARAXAPPPXXPPPPXRXXAWXP 724
P P P A PP + +A AA PPP PPPP R P
Sbjct: 268 PNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPP--PPPPSRRNRGKP 325
Query: 725 -------XAPXPXPXXXXVWXXXGXXXPPPAXWAXXXXXPPPPR-APXXRXRPAXRGAXX 880
+ P P G PP PPPPR AP +P +
Sbjct: 326 PIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQ--GRSAPPPPPPRSAPSTGRQPPPLSSSR 383
Query: 881 AXXXXAXPAPP 913
A PAPP
Sbjct: 384 AVSN--PPAPP 392
Score = 30.7 bits (66), Expect = 0.35
Identities = 40/140 (28%), Positives = 47/140 (33%), Gaps = 2/140 (1%)
Frame = +1
Query: 595 PRPXAPPRXXARXAXXVGXSGRAGXXXPSXPPAPPRAXXRLXAARPXAXPXXPXXLXXXX 774
P P PP R +G +G + P PP PPR+ AA + P P
Sbjct: 311 PPPPPPPSRRNRGKPPIG-NGSSNSSLPPPPP-PPRSN----AA--GSIPLPPQG----- 357
Query: 775 XXXPPPGXXGPXXXXAPAXXRXXXPPXXGXA-RRXGRPXXARXXR-APXXPXRGPGRLXX 948
PPP P AP+ R P A P A R AP P G
Sbjct: 358 RSAPPP----PPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTS 413
Query: 949 SPPXXGPXXXPPXXXPXGXP 1008
+PP P PP P P
Sbjct: 414 TPPVPTPPSLPPSAPPSLPP 433
Score = 25.8 bits (54), Expect = 10.0
Identities = 32/119 (26%), Positives = 35/119 (29%), Gaps = 13/119 (10%)
Frame = +2
Query: 611 PPXXXXAXPGXSAXXAARAXAPPPXXPPPPXRXXAWXPXAPXPXP-----XXXXVWXXXG 775
PP + P + A APPP PPP P P P +
Sbjct: 233 PPSIPSSRP-PERVPSLSAPAPPP--IPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSK 289
Query: 776 XXXPPP------AXWAXXXXXPPPPRAPXXRXR--PAXRGAXXAXXXXAXPAPPXXXAA 928
PPP A A PPPP P R R P P PP AA
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAA 348
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 34.3 bits (75), Expect = 0.028
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +2
Query: 689 PPPPXRXXAWXPXAPXPXPXXXXVWXXXGXXXPPPAXWAXXXXXPPPPRAP 841
PPPP AP P P G PPP PPPP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 32.3 bits (70), Expect = 0.11
Identities = 19/55 (34%), Positives = 20/55 (36%)
Frame = +2
Query: 677 PPXXPPPPXRXXAWXPXAPXPXPXXXXVWXXXGXXXPPPAXWAXXXXXPPPPRAP 841
PP PPPP AP P P + PPP A PPPP P
Sbjct: 732 PP--PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGV-AGAGPPPPPPPPP 783
Score = 29.5 bits (63), Expect = 0.81
Identities = 18/64 (28%), Positives = 18/64 (28%)
Frame = +2
Query: 554 PRAPRXXXPXXXAXRXXXPPPXXXXAXPGXSAXXAARAXAPPPXXPPPPXRXXAWXPXAP 733
P P P PPP P A A PP PPPP A
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYY 793
Query: 734 XPXP 745
P P
Sbjct: 794 APAP 797
Score = 27.5 bits (58), Expect = 3.3
Identities = 14/49 (28%), Positives = 15/49 (30%)
Frame = +1
Query: 679 SXPPAPPRAXXRLXAARPXAXPXXPXXLXXXXXXXPPPGXXGPXXXXAP 825
S PP PP A P P + PPPG G P
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 27.1 bits (57), Expect = 4.3
Identities = 18/65 (27%), Positives = 18/65 (27%)
Frame = +2
Query: 545 PXGPRAPRXXXPXXXAXRXXXPPPXXXXAXPGXSAXXAARAXAPPPXXPPPPXRXXAWXP 724
P P A P P P P A A PPP PPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRY 792
Query: 725 XAPXP 739
AP P
Sbjct: 793 YAPAP 797
Score = 27.1 bits (57), Expect = 4.3
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -2
Query: 501 PPXXXGXXGAXXGXAXPPPPPP 436
PP G GA G PPPPPP
Sbjct: 764 PPPPPGVAGA--GPPPPPPPPP 783
Score = 25.0 bits (52), Expect(2) = 0.24
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3
Query: 458 PXPPPPPPA 432
P PPPPPPA
Sbjct: 776 PPPPPPPPA 784
Score = 24.6 bits (51), Expect(2) = 0.24
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -3
Query: 473 PXXXXPXPPPPPP 435
P P PPPPPP
Sbjct: 756 PIMGGPPPPPPPP 768
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 32.3 bits (70), Expect = 0.11
Identities = 27/106 (25%), Positives = 29/106 (27%)
Frame = +2
Query: 524 PXXXXXXPXGPRAPRXXXPXXXAXRXXXPPPXXXXAXPGXSAXXAARAXAPPPXXPPPPX 703
P P P+ P P A P P A P A P P PP
Sbjct: 1095 PKPSVAAPPVPK-PSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGA-PPVPKPSVAAPPV 1152
Query: 704 RXXAWXPXAPXPXPXXXXVWXXXGXXXPPPAXWAXXXXXPPPPRAP 841
+ P P P V P P A PPP AP
Sbjct: 1153 PAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAP 1198
Score = 28.7 bits (61), Expect = 1.4
Identities = 31/146 (21%), Positives = 33/146 (22%), Gaps = 1/146 (0%)
Frame = +3
Query: 546 PXAPAXPGXXXPXXXRAAXXXPPPXXGXPGXXXRXXXPRGPXXPLXPXRPPPXXXPPGRR 725
P AP P A P P P P P P P P
Sbjct: 1004 PAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAP 1063
Query: 726 XPXXXXXXXXXSGXXXXXGPP-PRPXGPXXXXGPRXXAXXXPAXXRXXAAPRXPXXRXPX 902
P S PP P P G P A P P P
Sbjct: 1064 PPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPV 1123
Query: 903 PRPXXXXPRXXAXXALPAXXRPXXXA 980
P+P P P +P A
Sbjct: 1124 PKPSVAAPPVPVPSGAPPVPKPSVAA 1149
Score = 27.1 bits (57), Expect = 4.3
Identities = 26/117 (22%), Positives = 30/117 (25%)
Frame = +2
Query: 560 APRXXXPXXXAXRXXXPPPXXXXAXPGXSAXXAARAXAPPPXXPPPPXRXXAWXPXAPXP 739
AP P P P P A PPP PP + P P P
Sbjct: 1154 APSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPP 1213
Query: 740 XPXXXXVWXXXGXXXPPPAXWAXXXXXPPPPRAPXXRXRPAXRGAXXAXXXXAXPAP 910
G P P A P P P R + + A P+P
Sbjct: 1214 STAPPVPTPSAG-LPPVPVPTAKAPPVPAPSSEAPSVSTP--RSSVPSPHSNASPSP 1267
Score = 26.6 bits (56), Expect = 5.7
Identities = 16/64 (25%), Positives = 19/64 (29%)
Frame = +2
Query: 554 PRAPRXXXPXXXAXRXXXPPPXXXXAXPGXSAXXAARAXAPPPXXPPPPXRXXAWXPXAP 733
P AP P PP A + P P PP + + P AP
Sbjct: 1004 PAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAP 1063
Query: 734 XPXP 745
P P
Sbjct: 1064 PPVP 1067
Score = 26.6 bits (56), Expect = 5.7
Identities = 28/130 (21%), Positives = 29/130 (22%)
Frame = +3
Query: 579 PXXXRAAXXXPPPXXGXPGXXXRXXXPRGPXXPLXPXRPPPXXXPPGRRXPXXXXXXXXX 758
P A PPP P G P P P PP P
Sbjct: 1053 PKSSSGAPSAPPPVPAPSSEIPSIPAPSGA-----PPVPAPSGIPP---VPKPSVAAPPV 1104
Query: 759 SGXXXXXGPPPRPXGPXXXXGPRXXAXXXPAXXRXXAAPRXPXXRXPXPRPXXXXPRXXA 938
P P P G P A P P+ P P P P
Sbjct: 1105 PKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKP 1164
Query: 939 XXALPAXXRP 968
A P P
Sbjct: 1165 SVAAPPVPAP 1174
Score = 26.2 bits (55), Expect = 7.5
Identities = 26/122 (21%), Positives = 33/122 (27%)
Frame = +2
Query: 545 PXGPRAPRXXXPXXXAXRXXXPPPXXXXAXPGXSAXXAARAXAPPPXXPPPPXRXXAWXP 724
P P+ P P A P P A P A + P P PP + P
Sbjct: 1140 PPVPK-PSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAP 1198
Query: 725 XAPXPXPXXXXVWXXXGXXXPPPAXWAXXXXXPPPPRAPXXRXRPAXRGAXXAXXXXAXP 904
P P V P P A P P P+ + + P
Sbjct: 1199 PVPKPSVGVPPV-PPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVP 1257
Query: 905 AP 910
+P
Sbjct: 1258 SP 1259
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 31.5 bits (68), Expect = 0.20
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = +2
Query: 608 PPPXXXXAXPGXSAXXAARAXAPPPXXPPPPXRXXAWXPXAPXPXP 745
PPP A P AA A PP PP + P P P P
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPPAGATAISGNPGMPAPVP 1927
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.0 bits (52), Expect(2) = 0.24
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3
Query: 458 PXPPPPPPA 432
P PPPPPPA
Sbjct: 190 PPPPPPPPA 198
Score = 24.6 bits (51), Expect(2) = 0.24
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -3
Query: 473 PXXXXPXPPPPPP 435
P P PPPPPP
Sbjct: 184 PSDYNPPPPPPPP 196
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 25.8 bits (54), Expect(2) = 0.30
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -3
Query: 452 PPPPPPAGXXXKR 414
PPPPPP G KR
Sbjct: 24 PPPPPPPGYVKKR 36
Score = 23.4 bits (48), Expect(2) = 0.30
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 458 PXPPPPPP 435
P PPPPPP
Sbjct: 9 PPPPPPPP 16
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 30.3 bits (65), Expect = 0.46
Identities = 23/86 (26%), Positives = 27/86 (31%)
Frame = +1
Query: 535 PXXPXGPPRXPXXRAPXXGXPRPXAPPRXXARXAXXVGXSGRAGXXXPSXPPAPPRAXXR 714
P P P R P PRP PP A + P PPA P A +
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLP--PPAQPAAPVK 182
Query: 715 LXAARPXAXPXXPXXLXXXXXXXPPP 792
P + P P + PPP
Sbjct: 183 ----SPPSAPSLPSAVPPMPPKVPPP 204
Score = 29.5 bits (63), Expect = 0.81
Identities = 16/56 (28%), Positives = 18/56 (32%)
Frame = +2
Query: 578 PXXXAXRXXXPPPXXXXAXPGXSAXXAARAXAPPPXXPPPPXRXXAWXPXAPXPXP 745
P R PPP A P S + PPP P P + P P P
Sbjct: 140 PTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVP 195
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 25.0 bits (52), Expect(2) = 1.1
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3
Query: 458 PXPPPPPPA 432
P PPPPPPA
Sbjct: 1095 PPPPPPPPA 1103
Score = 22.2 bits (45), Expect(2) = 1.1
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -3
Query: 452 PPPPPPAGXXXKR 414
PPPPPP K+
Sbjct: 1096 PPPPPPPAEVEKK 1108
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 26.6 bits (56), Expect = 5.7
Identities = 18/60 (30%), Positives = 21/60 (35%)
Frame = -2
Query: 840 GARGGGGXXXXXAXXAGGGXXXPXXXQTXXXXGXGXGAXGXQAXXRXGGGGXXGGGAXAR 661
G+RGG G GGG G G G + R G GG GG A+
Sbjct: 13 GSRGGRGGFNGGRGGFGGG----RGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAK 68
Score = 26.6 bits (56), Expect = 5.7
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = -1
Query: 712 GXXXGGGRXGXRGXXGPRGXXXRXXXPGXPXXGGGXXXAAR 590
G GGGR G RG G RG R G GG A+
Sbjct: 33 GGARGGGRGGARGGRGGRG-GARGGRGGSSGGRGGAKGGAK 72
Score = 25.8 bits (54), Expect = 10.0
Identities = 17/49 (34%), Positives = 18/49 (36%)
Frame = -3
Query: 752 GXXGXAXGRAAXRRXXARGGAGGXEGXXXPARPXXPTXXAXRAXXRGGA 606
G G GR R RGGA G G AR R +GGA
Sbjct: 24 GRGGFGGGRGGAR-GGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGGA 71
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 26.2 bits (55), Expect = 7.5
Identities = 21/81 (25%), Positives = 21/81 (25%)
Frame = -1
Query: 805 GPXGRGGGPXXXXXPDXXXXXXXXXGXRRPGGXXXGGGRXGXRGXXGPRGXXXRXXXPGX 626
G G GGP G G GGG G G G G G
Sbjct: 192 GFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGL 251
Query: 625 PXXGGGXXXAARXXXGXXXPG 563
GGG G PG
Sbjct: 252 GGFGGGPGGFGGGPGGHGGPG 272
Score = 25.8 bits (54), Expect = 10.0
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = -2
Query: 486 GXXGAXXGXAXPPPPPPXGXEXEEXRXGXXGXGGRGH 376
G G G + PPP P G G G GG GH
Sbjct: 188 GGFGGFGGGSGGPPPGPGGF------GGFGGFGGEGH 218
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 25.8 bits (54), Expect = 10.0
Identities = 13/46 (28%), Positives = 15/46 (32%)
Frame = +2
Query: 554 PRAPRXXXPXXXAXRXXXPPPXXXXAXPGXSAXXAARAXAPPPXXP 691
P P+ P + PPP P A APPP P
Sbjct: 1691 PVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 25.8 bits (54), Expect = 10.0
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = +2
Query: 608 PPPXXXXAXPGXSAXXAARAXAPPPXXPPPPXRXXAWXPXAPXP 739
PPP P SA A PP PPPP + P P P
Sbjct: 1707 PPPPPMSVPPPPSAPPMP---AGPPSAPPPPLPASS-APSVPNP 1746
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,876,140
Number of Sequences: 5004
Number of extensions: 22560
Number of successful extensions: 229
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 132
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 539240220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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