Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_F22
         (888 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC087079-7|AAK27870.1|  145|Caenorhabditis elegans Hypothetical ...   115   4e-26
AC087079-8|AAK27871.1|   88|Caenorhabditis elegans Hypothetical ...    46   5e-05
Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z77655-1|CAB01137.1|  393|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z75550-7|CAA99925.2|  195|Caenorhabditis elegans Hypothetical pr...    28   7.8  
AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical...    28   7.8  
AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical...    28   7.8  

>AC087079-7|AAK27870.1|  145|Caenorhabditis elegans Hypothetical
           protein Y37E3.8a protein.
          Length = 145

 Score =  115 bits (277), Expect = 4e-26
 Identities = 56/127 (44%), Positives = 76/127 (59%)
 Frame = +3

Query: 117 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 296
           MA + +KTRKLRGHVS                 NAGG+HHHRIN DKYHPGYFGK+GMR 
Sbjct: 1   MAHALRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINRDKYHPGYFGKVGMRV 60

Query: 297 FHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPXHQYCQSWILQVARQRQTPQT 476
           FH  KN+++CP +N+++LW+LV ++ R K   A  GK P     +    +V  +   P+T
Sbjct: 61  FHLNKNQHYCPTVNVERLWSLVPQEVRDK---ATGGKSPVIDCTKLGYFKVLGKGLLPET 117

Query: 477 TCHSKSK 497
               K++
Sbjct: 118 PLIVKAR 124


>AC087079-8|AAK27871.1|   88|Caenorhabditis elegans Hypothetical
           protein Y37E3.8b protein.
          Length = 88

 Score = 45.6 bits (103), Expect = 5e-05
 Identities = 23/70 (32%), Positives = 39/70 (55%)
 Frame = +3

Query: 288 MRNFHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPXHQYCQSWILQVARQRQT 467
           MR FH  KN+++CP +N+++LW+LV ++ R K   A  GK P     +    +V  +   
Sbjct: 1   MRVFHLNKNQHYCPTVNVERLWSLVPQEVRDK---ATGGKSPVIDCTKLGYFKVLGKGLL 57

Query: 468 PQTTCHSKSK 497
           P+T    K++
Sbjct: 58  PETPLIVKAR 67


>Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical
           protein Y37A1B.17b protein.
          Length = 1467

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +3

Query: 432 SWILQVARQRQTPQTTCHSKSKVLLKISREENQGC 536
           SW+ +++   Q P+T C      ++K+ REE   C
Sbjct: 5   SWV-RISNATQDPETRCSVAQDQIVKVVREEGDWC 38


>Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical
           protein Y37A1B.17a protein.
          Length = 1538

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +3

Query: 432 SWILQVARQRQTPQTTCHSKSKVLLKISREENQGC 536
           SW+ +++   Q P+T C      ++K+ REE   C
Sbjct: 5   SWV-RISNATQDPETRCSVAQDQIVKVVREEGDWC 38


>Z77655-1|CAB01137.1|  393|Caenorhabditis elegans Hypothetical
           protein C56A3.1 protein.
          Length = 393

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 223 PALPRPPGCLRCFPIRPCP 167
           PA P+ P C  C P +PCP
Sbjct: 50  PACPQAPSCPVCPPPQPCP 68


>Z75550-7|CAA99925.2|  195|Caenorhabditis elegans Hypothetical
           protein T22C1.9 protein.
          Length = 195

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 5/69 (7%)
 Frame = +3

Query: 120 ATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMD-----KYHPGYFGKL 284
           +T  KK+ K  GH                   N GG   H + M+     ++ P  F KL
Sbjct: 127 STKSKKSEKDVGHDDHKKEDVHGDQKDDNKDRNDGGRDSHVVQMEHNSEEEHEPSGFKKL 186

Query: 285 GMRNFHFRK 311
           G   F+F+K
Sbjct: 187 GKSFFNFKK 195


>AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical
           protein Y37A1B.17b protein.
          Length = 1467

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +3

Query: 432 SWILQVARQRQTPQTTCHSKSKVLLKISREENQGC 536
           SW+ +++   Q P+T C      ++K+ REE   C
Sbjct: 5   SWV-RISNATQDPETRCSVAQDQIVKVVREEGDWC 38


>AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical
           protein Y37A1B.17a protein.
          Length = 1538

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +3

Query: 432 SWILQVARQRQTPQTTCHSKSKVLLKISREENQGC 536
           SW+ +++   Q P+T C      ++K+ REE   C
Sbjct: 5   SWV-RISNATQDPETRCSVAQDQIVKVVREEGDWC 38


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,928,130
Number of Sequences: 27780
Number of extensions: 265956
Number of successful extensions: 604
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 603
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)