Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_F21
(894 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 128 2e-28
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 89 1e-16
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 87 4e-16
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 66 1e-09
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 3e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 48 2e-04
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 48 4e-04
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.049
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.086
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 38 0.46
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 4.3
UniRef50_A1WXA2 Cluster: VanZ family protein precursor; n=1; Hal... 34 4.3
UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 34 5.6
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.6
UniRef50_Q753M6 Cluster: AFR286Wp; n=1; Eremothecium gossypii|Re... 33 7.4
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 128 bits (309), Expect = 2e-28
Identities = 58/59 (98%), Positives = 58/59 (98%)
Frame = +3
Query: 522 FSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLXAPSCALLFRPCRLPDTCPPFSLR 698
FSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL APSCALLFRPCRLPDTCPPFSLR
Sbjct: 16 FSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLR 74
Score = 44.0 bits (99), Expect = 0.005
Identities = 23/46 (50%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +1
Query: 670 RIPVRPSPFGX--AWRFLIAHAVGIPXRGXSFPPNLGCXXKPPXXP 801
R+P PF AWRFLIAHAVGI R SF P+ PP P
Sbjct: 63 RLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSP 108
Score = 41.5 bits (93), Expect = 0.028
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +2
Query: 767 TWAVCXNPPXNPXGGPXPVTIXLNSTR 847
+WAVC NPP +P P PVTI L+ TR
Sbjct: 97 SWAVCTNPPFSPTAAPYPVTIVLSPTR 123
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 89.0 bits (211), Expect = 1e-16
Identities = 41/46 (89%), Positives = 42/46 (91%)
Frame = +3
Query: 522 FSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLXAPSCALLFRP 659
FSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL APSCALLF P
Sbjct: 52 FSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 87.4 bits (207), Expect = 4e-16
Identities = 41/50 (82%), Positives = 42/50 (84%)
Frame = +3
Query: 522 FSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLXAPSCALLFRPCRLP 671
FSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL APSCALLF P LP
Sbjct: 84 FSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +1
Query: 313 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLT 411
R +C G +PLPRSLTR ARSFGCGERY+LT
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 66.1 bits (154), Expect = 1e-09
Identities = 39/92 (42%), Positives = 45/92 (48%)
Frame = -3
Query: 847 PGXIQXDXYRXRXTXRVXRGVXAXSPSXXGTTYPEXGYLQREL*ESATLXRREKGGQVSG 668
PG Q D YR + R RGV A SP+ P ++ + +K QVSG
Sbjct: 8 PGWTQDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQVSG 67
Query: 667 KRQGRNRRAHEGAXRGKRLVSL*SCRVSPPLT 572
KRQGRNRRAHEGA K SL PPLT
Sbjct: 68 KRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 3e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -1
Query: 489 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 376
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +1
Query: 289 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 456
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 48.4 bits (110), Expect = 2e-04
Identities = 30/69 (43%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +1
Query: 601 IKIPGVSPXKLPRALSCSDPAAYRIPVRPSPFGXAWRFLIAHA--VGIPXRGXSFPPNLG 774
+KI VS LP ALSCS+PA RIPV PF A ++H+ GI R SF P+
Sbjct: 32 LKIITVSDESLPLALSCSNPAVSRIPV--PPFSLAGSVALSHSSHSGISARCRSFAPSWA 89
Query: 775 CXXKPPXXP 801
PP P
Sbjct: 90 VSKNPPFSP 98
Score = 38.3 bits (85), Expect = 0.26
Identities = 24/51 (47%), Positives = 24/51 (47%)
Frame = +3
Query: 573 VRGGETRQDYKDTRRFPLXAPSCALLFRPCRLPDTCPPFSLRXSVALSHSS 725
VR GETRQD K P P PPFSL SVALSHSS
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSS 73
Score = 37.1 bits (82), Expect = 0.60
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 767 TWAVCXNPPXNPXGGPXPVTIXLNSTR 847
+WAV NPP +P P PVT+ L+ TR
Sbjct: 87 SWAVSKNPPFSPTAAPYPVTVHLSPTR 113
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 47.6 bits (108), Expect = 4e-04
Identities = 23/46 (50%), Positives = 30/46 (65%)
Frame = +3
Query: 522 FSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLXAPSCALLFRP 659
F S PLT+ITKI Q + +T+ +YK T FPL +PS +LLF P
Sbjct: 69 FPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 408 HSKAVIRLSTESGDNAGKNM 467
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.049
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 287 SALMNRPTRGERRFAYW 337
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.086
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -2
Query: 359 ERGSGRAPNTQTASPRALADSLMQ 288
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 37.5 bits (83), Expect = 0.46
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +2
Query: 101 MIRYIDEFGQTTTRMQ 148
MIRYIDEFGQTTTRMQ
Sbjct: 349 MIRYIDEFGQTTTRMQ 364
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 34.3 bits (75), Expect = 4.3
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -1
Query: 498 GXWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 376
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_A1WXA2 Cluster: VanZ family protein precursor; n=1;
Halorhodospira halophila SL1|Rep: VanZ family protein
precursor - Halorhodospira halophila (strain DSM 244 /
SL1) (Ectothiorhodospirahalophila (strain DSM 244 /
SL1))
Length = 1131
Score = 34.3 bits (75), Expect = 4.3
Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = -1
Query: 549 SSGGR---SLWKTPATRPFYGXWPFAGLLLTCSFL-RYPLILWITVLPPL 412
SSGG ++W P + W AGLL+ L RYPL W+ VLPPL
Sbjct: 504 SSGGLLAVAIWLAAWAWPAWPGWLAAGLLIYAVLLWRYPLA-WLWVLPPL 552
>UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 201
Score = 33.9 bits (74), Expect = 5.6
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +2
Query: 170 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTRGERRFAYW 337
+ DA F+ I N +N+++C + +V +VWE + P RG +F YW
Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.6
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -3
Query: 250 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 86
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_Q753M6 Cluster: AFR286Wp; n=1; Eremothecium gossypii|Rep:
AFR286Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 1758
Score = 33.5 bits (73), Expect = 7.4
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Frame = +1
Query: 568 LKSEVAKPDRTIKIP-GVS-PXKLPRALSCSDPAAYRIPVRPSPFGXAW 708
L+S+++K + K P G + P K+P L + P A ++PV+PSPF A+
Sbjct: 1656 LESKISKLESQAKAPLGTNVPTKIP--LENTQPLAQQVPVKPSPFQLAY 1702
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 734,852,726
Number of Sequences: 1657284
Number of extensions: 13301956
Number of successful extensions: 32400
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 31153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32387
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80751996367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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