Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_F19
(892 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC191.09c |gst1||glutathione S-transferase Gst1|Schizosaccharo... 43 5e-05
SPCC965.07c |gst2||glutathione S-transferase Gst2|Schizosaccharo... 43 5e-05
SPAC688.04c |gst3||glutathione S-transferase |Schizosaccharomyce... 36 0.008
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 33 0.055
SPCC1620.07c |||lunapark homolog|Schizosaccharomyces pombe|chr 3... 29 0.67
SPAC13G7.01c |erg7|SPAC4G9.21c|lanosterol synthase Erg7 |Schizos... 27 3.6
SPAC343.16 |lys2||homoaconitate hydratase Lys2|Schizosaccharomyc... 27 3.6
>SPCC191.09c |gst1||glutathione S-transferase
Gst1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 229
Score = 43.2 bits (97), Expect = 5e-05
Identities = 34/116 (29%), Positives = 60/116 (51%), Gaps = 6/116 (5%)
Frame = +3
Query: 312 NGLSIWESRAIITYLVNKY--AKGSSLYPEEPKARALVDQRLYFDI---GTLYQRFSDY- 473
N +IWES AI+ YL +KY + SL + P+ ++ Q L+F G ++ + +
Sbjct: 64 NDYTIWESDAILIYLADKYDTERKISLPRDHPEYYKVI-QYLFFQASGQGIIWGQAGWFS 122
Query: 474 FYPQVFAGAPADKAKNEKVQEALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLE 641
Y Q + + +NE ++ L +L+ L+ + Y+ T+ADLS I+ + LE
Sbjct: 123 VYHQELVISAITRYRNE-IKRVLGVLEDILKDRDYLVANRFTIADLSFISWNNFLE 177
>SPCC965.07c |gst2||glutathione S-transferase
Gst2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 230
Score = 43.2 bits (97), Expect = 5e-05
Identities = 33/110 (30%), Positives = 60/110 (54%), Gaps = 7/110 (6%)
Frame = +3
Query: 312 NGLSIWESRAIITYLVNKY--AKGSSLYPEEPKARALVDQRLYFDI---GTLYQR--FSD 470
N +IWES AI+ YL +KY + SL ++P+ L+ Q L+F G ++ + + +
Sbjct: 64 NDYTIWESDAILIYLADKYDTDRKISLSFDDPEYYKLI-QYLFFQASGQGVIWGQAGWFN 122
Query: 471 YFYPQVFAGAPADKAKNEKVQEALQLLDKFLEGQKYVAGPNLTVADLSLI 620
+F+ + A + +NE ++ L +L+ L+ + Y+ T+ADLS I
Sbjct: 123 FFHHEPVVSA-VTRYRNE-IKRVLGVLEDILKDRDYLVANKYTIADLSFI 170
>SPAC688.04c |gst3||glutathione S-transferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 242
Score = 35.9 bits (79), Expect = 0.008
Identities = 38/159 (23%), Positives = 59/159 (37%), Gaps = 17/159 (10%)
Frame = +3
Query: 312 NGLSIWESRAIITYLVNKYAKGSSLYPEEPKARALVDQRLYFDIGT-------------- 449
+G++ ES AI+ +LV KY G S P E L L+
Sbjct: 57 DGVTYIESAAILEHLVRKY--GPSFKPSEEDVAELEKYELWMHFSEASLMPFIWASHVLD 114
Query: 450 LYQRFSDYFYPQV---FAGAPADKAKNEKVQEALQLLDKFLEGQKYVAGPNLTVADLSLI 620
L + F+ + F K +++ L +D L +Y AG T AD +
Sbjct: 115 LSVNMTPIFFRYIVRQFVNGIKSKYLSKETFLNLDYIDNHLASNEYFAGEQFTAADPQMC 174
Query: 621 ASVSSLEASDIDFXXYANVKRWYETVKSTAPGYQEXNEK 737
+ + + + Y N+KRW V S P + EK
Sbjct: 175 FPIFAAQRDYLSQKPYKNIKRWMRVV-SDRPACRIAAEK 212
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 33.1 bits (72), Expect = 0.055
Identities = 24/77 (31%), Positives = 37/77 (48%)
Frame = -3
Query: 341 GAGLPD*KTIRRLGSGPCVEGSTSNISGLSCSPWCRSTSLRFRFKLSAXAVSSTALQGAE 162
G L K I + G PC T+N+SG +PW ++ LR L A+ S L+ E
Sbjct: 177 GGNLKCMKLILKEGGIPCT-AVTANLSGQLKTPWALASELRVS-HLFKQALISNGLKVKE 234
Query: 161 PGTXVQVRWAVLPNFFK 111
+ +W V+P+ F+
Sbjct: 235 TSEEPE-KWVVVPSKFQ 250
>SPCC1620.07c |||lunapark homolog|Schizosaccharomyces pombe|chr
3|||Manual
Length = 334
Score = 29.5 bits (63), Expect = 0.67
Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 4/83 (4%)
Frame = +3
Query: 513 AKNEKVQEALQLLDKFLEGQ----KYVAGPNLTVADLSLIASVSSLEASDIDFXXYANVK 680
A+ K+ +AL+ ++ E Q KY P L LS A+ S+ S + +
Sbjct: 116 AEKRKILDALKSRKEYFETQALLEKYGEQPTLAQKKLSNAAAAKSVPGSSSSSSDPMHPQ 175
Query: 681 RWYETVKSTAPGYQEXNEKGLXA 749
WY+ V G E +E A
Sbjct: 176 HWYDRVLEGLVGANENSENNREA 198
>SPAC13G7.01c |erg7|SPAC4G9.21c|lanosterol synthase Erg7
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 721
Score = 27.1 bits (57), Expect = 3.6
Identities = 30/136 (22%), Positives = 56/136 (41%), Gaps = 8/136 (5%)
Frame = +3
Query: 309 TNGLSIWESRAIITYLVNK--YAKGSSLYPEEPKARALVDQR----LYFDIGTLYQRFSD 470
TNGL +WE+ + LV Y K + P+ KA +D++ Y G Y
Sbjct: 379 TNGLQVWETSFTLQALVESGLYEK-EAFKPDIAKALEFLDRQQIRTQYEGSGYRYNSLGA 437
Query: 471 YFYPQVFAGAPADKAKNEKVQEALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEASD 650
+ + + G +E ++ A+ L+ + +K V P L ++ + + ++ +
Sbjct: 438 WPFSNITQGYTVSDTTSEALR-AVLLVQSLPDFEKLVDIPRLRLS----VDVILGMQNEN 492
Query: 651 IDFXXY--ANVKRWYE 692
+ F Y A W E
Sbjct: 493 LGFASYEPARTGEWME 508
>SPAC343.16 |lys2||homoaconitate hydratase Lys2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 721
Score = 27.1 bits (57), Expect = 3.6
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +3
Query: 312 NGLSIWESRAIITYLVNKYAKGSSLYPEEPKARALVDQRLYF 437
N LSI ESR I + ++ S L+P + K A + RL F
Sbjct: 263 NSLSI-ESRLTIANMTTEWGALSGLFPTDEKLLAWYEDRLKF 303
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,741,560
Number of Sequences: 5004
Number of extensions: 49702
Number of successful extensions: 147
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 145
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 448490560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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