Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_F17
         (864 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q17AF3 Cluster: Putative uncharacterized protein; n=1; ...   138   2e-31
UniRef50_Q9VVN9 Cluster: CG7330-PA; n=3; Diptera|Rep: CG7330-PA ...   126   5e-28
UniRef50_A3ZWK7 Cluster: Transcriptional regulator, AraC family ...    41   0.035
UniRef50_Q57XU1 Cluster: Putative uncharacterized protein; n=1; ...    35   3.1  
UniRef50_A5UVS9 Cluster: Transcriptional activator domain; n=2; ...    34   4.0  
UniRef50_A2E5A3 Cluster: Putative uncharacterized protein; n=1; ...    34   5.3  
UniRef50_Q9YUM7 Cluster: Polyprotein; n=224; GB virus C|Rep: Pol...    33   7.1  
UniRef50_Q5WGB4 Cluster: GTPase; n=1; Bacillus clausii KSM-K16|R...    33   9.3  
UniRef50_O67092 Cluster: Hydrogenase large subunit; n=1; Aquifex...    33   9.3  

>UniRef50_Q17AF3 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 192

 Score =  138 bits (334), Expect = 2e-31
 Identities = 76/156 (48%), Positives = 96/156 (61%), Gaps = 12/156 (7%)
 Frame = +1

Query: 343 QQTSFELPVQLIGFPFIIMAVRLTNFVKKLSYALSPATYRSRSRRELL-----LTD---P 498
           Q+  FELPVQLIGFP II++VRL NF KKL+Y+++P TY+SRSRRE L     LTD    
Sbjct: 31  QEPLFELPVQLIGFPVIILSVRLANFAKKLAYSVNPKTYQSRSRRETLAGAGELTDEEIS 90

Query: 499 AEPFDVVEVEKYIVGEFGAKACVFERVCAHYATRA-RTQPRP---QLDWPDVFSQYKRSP 666
               DV + E+ I+ EFG KAC+ E  C  +A R+ RT   P   Q DW D+   YK   
Sbjct: 91  RMAVDVAQAERKILQEFGPKACIEEEPCRLHAVRSTRTTSAPGDYQPDWNDILKNYKVRA 150

Query: 667 DQAKEYYLLSVFLGDIVGSPTLCHQLGKRMNCDTQQ 774
              K++YLLSVF+GD +     C QL KR+ CD  Q
Sbjct: 151 SGMKQWYLLSVFIGDYIRDVQFCKQLSKRLACDRNQ 186


>UniRef50_Q9VVN9 Cluster: CG7330-PA; n=3; Diptera|Rep: CG7330-PA -
           Drosophila melanogaster (Fruit fly)
          Length = 193

 Score =  126 bits (305), Expect = 5e-28
 Identities = 73/171 (42%), Positives = 99/171 (57%), Gaps = 15/171 (8%)
 Frame = +1

Query: 295 CLLSFLLFQCLMEGTGQQTS--FELPVQLIGFPFIIMAVRLTNFVKKLSYALSPATYRSR 468
           C+L  LL + + EG  Q +   FELPVQL+GFP I+++VRL+ F KKL+Y+LSP+TYRSR
Sbjct: 16  CVLLVLLLEFVEEGLAQNSDPLFELPVQLVGFPVIVLSVRLSQFAKKLAYSLSPSTYRSR 75

Query: 469 SRRELLLTDPAEP--FDVVEVEKYIVGEFGAKACVFERVCAHYATR---------ARTQP 615
           +RR     D A P   D    +K I+GEFG +AC+ E  C  +A+R            + 
Sbjct: 76  TRR-----DTAHPLALDAELAQKQILGEFGPQACILEEPCRVHASRYSGSSDGRFPDGKA 130

Query: 616 RPQLDWPDVFSQYK--RSPDQAKEYYLLSVFLGDIVGSPTLCHQLGKRMNC 762
           +P   W +V   YK        K++YLLS+F+GD V    LC  L KRM C
Sbjct: 131 KPHAAWSEVLRNYKVQSGVSGMKQWYLLSLFIGDAVRDVPLCKHLAKRMPC 181


>UniRef50_A3ZWK7 Cluster: Transcriptional regulator, AraC family
           protein; n=1; Blastopirellula marina DSM 3645|Rep:
           Transcriptional regulator, AraC family protein -
           Blastopirellula marina DSM 3645
          Length = 301

 Score = 41.1 bits (92), Expect = 0.035
 Identities = 21/44 (47%), Positives = 26/44 (59%)
 Frame = -1

Query: 672 LIRRTLVLTENIWPVKLRPRLRSRPGRIVRAYTFEHASFGTELA 541
           LIRR L LTEN  P  L PR R RP  I R   + HA+F  +++
Sbjct: 172 LIRRLLALTENQAPAPLGPRDRLRPASIQRTLEYLHANFSQDVS 215


>UniRef50_Q57XU1 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma brucei|Rep: Putative uncharacterized protein
           - Trypanosoma brucei
          Length = 696

 Score = 34.7 bits (76), Expect = 3.1
 Identities = 25/64 (39%), Positives = 34/64 (53%)
 Frame = +3

Query: 306 ISAVPMSNGRNWSADIVRTTSTVDRFPFHHHGSATHQLC*ETILCFEPSDIPVSESP*VV 485
           +S++P  NG NWSADI+RT S VD     + G A  +   +  L   P D  ++ SP   
Sbjct: 1   MSSLPSGNG-NWSADIIRTASKVDAVTM-YKGQAHVRRYAKIKL---PFDDTINTSPRTP 55

Query: 486 ANGP 497
           AN P
Sbjct: 56  ANTP 59


>UniRef50_A5UVS9 Cluster: Transcriptional activator domain; n=2;
           Roseiflexus|Rep: Transcriptional activator domain -
           Roseiflexus sp. RS-1
          Length = 1070

 Score = 34.3 bits (75), Expect = 4.0
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -3

Query: 637 LASQAEAAVAFAPWSHSARIHVRTRKLWHRTRPLCISPLLPHRRARL 497
           +AS  EAA A A W+     ++   + WH T    ++PL P  R RL
Sbjct: 683 IASSVEAAAAGALWAAILSDNLTLAQAWHDTAASIVTPLQPEVRGRL 729


>UniRef50_A2E5A3 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 863

 Score = 33.9 bits (74), Expect = 5.3
 Identities = 19/49 (38%), Positives = 27/49 (55%)
 Frame = -1

Query: 654 VLTENIWPVKLRPRLRSRPGRIVRAYTFEHASFGTELAHYVFLHFYHIE 508
           +LTEN W V +   LRS P +I    T + A +  E A  VF++ + IE
Sbjct: 567 ILTENSWNVLVEMCLRSDPSKIKEILTHKSAKYNNEEA-LVFMNSFGIE 614


>UniRef50_Q9YUM7 Cluster: Polyprotein; n=224; GB virus C|Rep:
           Polyprotein - GB virus C
          Length = 166

 Score = 33.5 bits (73), Expect = 7.1
 Identities = 17/45 (37%), Positives = 25/45 (55%)
 Frame = +1

Query: 382 FPFIIMAVRLTNFVKKLSYALSPATYRSRSRRELLLTDPAEPFDV 516
           FP  IMAV L   V +    L+PAT+  R++ +  LT+   P D+
Sbjct: 27  FPIPIMAVLLLFLVVEAGAILAPATHACRAKEQYFLTNCCAPEDI 71


>UniRef50_Q5WGB4 Cluster: GTPase; n=1; Bacillus clausii KSM-K16|Rep:
           GTPase - Bacillus clausii (strain KSM-K16)
          Length = 1195

 Score = 33.1 bits (72), Expect = 9.3
 Identities = 27/98 (27%), Positives = 42/98 (42%)
 Frame = +1

Query: 388 FIIMAVRLTNFVKKLSYALSPATYRSRSRRELLLTDPAEPFDVVEVEKYIVGEFGAKACV 567
           F +  V+     KK + A       S  +RE+LL+       + E+ + +  E  A AC+
Sbjct: 695 FKLAGVKTETAAKKQARAYLQTLAASLKQREMLLSTTTT-VPLTELSELVANE--AHACL 751

Query: 568 FERVCAHYATRARTQPRPQLDWPDVFSQYKRSPDQAKE 681
              VC +Y     TQ    +D P V S + R  + A E
Sbjct: 752 IADVCIYYDCLLTTQGLTLVDTPGVNSIHGRHTNVAYE 789


>UniRef50_O67092 Cluster: Hydrogenase large subunit; n=1; Aquifex
           aeolicus|Rep: Hydrogenase large subunit - Aquifex
           aeolicus
          Length = 564

 Score = 33.1 bits (72), Expect = 9.3
 Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
 Frame = -1

Query: 588 VRAYTFEHASFGTELAHYVFLHFYHIEGLGWVR-*QQLTATPRPVCRWAQSI 436
           V A        GT   H   +HFYH+  L WV   Q L A P    R AQS+
Sbjct: 85  VNASLLRKLIIGTIFVHDHVVHFYHLHLLDWVNPVQALKADPYETSRLAQSL 136


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 792,091,439
Number of Sequences: 1657284
Number of extensions: 15696181
Number of successful extensions: 34462
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 33521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34456
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 76652910257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)