Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_F17
         (864 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1466 + 30350112-30350978                                         30   2.1  
10_06_0104 + 10786613-10788040                                         30   2.7  
04_04_1138 - 31162440-31163488,31163910-31164164,31164386-311645...    29   4.8  
05_04_0126 + 18252594-18256922                                         28   8.4  

>06_03_1466 + 30350112-30350978
          Length = 288

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 21/58 (36%), Positives = 29/58 (50%)
 Frame = -3

Query: 616 AVAFAPWSHSARIHVRTRKLWHRTRPLCISPLLPHRRARLGPLATTHGDSETGMSLGS 443
           A +F P S +A  HVR+  L  R+ PL +S L  H  A    L   HGD+    S+ +
Sbjct: 16  ARSFKPRSAAAACHVRSISLPCRSHPL-LSHLQSHIAAVRSWLLQDHGDASASASVSA 72


>10_06_0104 + 10786613-10788040
          Length = 475

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
 Frame = +1

Query: 358 ELPVQL-IGFPFIIMAVRLTNFVKKLSYALSPATYRSRSRRELLLTDPAEPFDVVEVEKY 534
           E+PV +  G+P      +L+  +    YAL P+T  S  R ++ + DP E    V + + 
Sbjct: 329 EMPVGMGEGWPARQAGTKLSAVIDGDLYALEPST--SSDRGKIKIYDPQEDAWKVAIGQV 386

Query: 535 IVGEFGAKACVF 570
            VG+F    C +
Sbjct: 387 PVGDFAESECPY 398


>04_04_1138 -
           31162440-31163488,31163910-31164164,31164386-31164500,
           31164523-31164579,31164580-31164632,31164721-31164981,
           31165243-31165293,31165395-31165430,31165815-31166040,
           31166082-31166132,31166346-31166465
          Length = 757

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +1

Query: 295 CLLSFLLFQCLMEGTGQQTSFELPVQ 372
           CLLSFL  + +MEG      F +P Q
Sbjct: 603 CLLSFLRLESMMEGYSDSDDFSVPEQ 628


>05_04_0126 + 18252594-18256922
          Length = 1442

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +1

Query: 292 WCLLSFLLFQCLMEGTGQ 345
           W +L ++LFQC   GTGQ
Sbjct: 273 WEILYYILFQCKQHGTGQ 290


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,271,298
Number of Sequences: 37544
Number of extensions: 435996
Number of successful extensions: 1016
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1016
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)