Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_F17
         (864 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113426-1|AAM29431.1|  193|Drosophila melanogaster RE22290p pro...   126   3e-29
AY071344-1|AAL48966.1|  193|Drosophila melanogaster RE37935p pro...   126   3e-29
AE014296-3006|AAF49272.1|  193|Drosophila melanogaster CG7330-PA...   126   3e-29

>AY113426-1|AAM29431.1|  193|Drosophila melanogaster RE22290p
           protein.
          Length = 193

 Score =  126 bits (305), Expect = 3e-29
 Identities = 73/171 (42%), Positives = 99/171 (57%), Gaps = 15/171 (8%)
 Frame = +1

Query: 295 CLLSFLLFQCLMEGTGQQTS--FELPVQLIGFPFIIMAVRLTNFVKKLSYALSPATYRSR 468
           C+L  LL + + EG  Q +   FELPVQL+GFP I+++VRL+ F KKL+Y+LSP+TYRSR
Sbjct: 16  CVLLVLLLEFVEEGLAQNSDPLFELPVQLVGFPVIVLSVRLSQFAKKLAYSLSPSTYRSR 75

Query: 469 SRRELLLTDPAEP--FDVVEVEKYIVGEFGAKACVFERVCAHYATR---------ARTQP 615
           +RR     D A P   D    +K I+GEFG +AC+ E  C  +A+R            + 
Sbjct: 76  TRR-----DTAHPLALDAELAQKQILGEFGPQACILEEPCRVHASRYSGSSDGRFPDGKA 130

Query: 616 RPQLDWPDVFSQYK--RSPDQAKEYYLLSVFLGDIVGSPTLCHQLGKRMNC 762
           +P   W +V   YK        K++YLLS+F+GD V    LC  L KRM C
Sbjct: 131 KPHAAWSEVLRNYKVQSGVSGMKQWYLLSLFIGDAVRDVPLCKHLAKRMPC 181


>AY071344-1|AAL48966.1|  193|Drosophila melanogaster RE37935p
           protein.
          Length = 193

 Score =  126 bits (305), Expect = 3e-29
 Identities = 73/171 (42%), Positives = 99/171 (57%), Gaps = 15/171 (8%)
 Frame = +1

Query: 295 CLLSFLLFQCLMEGTGQQTS--FELPVQLIGFPFIIMAVRLTNFVKKLSYALSPATYRSR 468
           C+L  LL + + EG  Q +   FELPVQL+GFP I+++VRL+ F KKL+Y+LSP+TYRSR
Sbjct: 16  CVLLVLLLEFVEEGLAQNSDPLFELPVQLVGFPVIVLSVRLSQFAKKLAYSLSPSTYRSR 75

Query: 469 SRRELLLTDPAEP--FDVVEVEKYIVGEFGAKACVFERVCAHYATR---------ARTQP 615
           +RR     D A P   D    +K I+GEFG +AC+ E  C  +A+R            + 
Sbjct: 76  TRR-----DTAHPLALDAELAQKQILGEFGPQACILEEPCRVHASRYSGSSDGRFPDGKA 130

Query: 616 RPQLDWPDVFSQYK--RSPDQAKEYYLLSVFLGDIVGSPTLCHQLGKRMNC 762
           +P   W +V   YK        K++YLLS+F+GD V    LC  L KRM C
Sbjct: 131 KPHAAWSEVLRNYKVQSGVSGMKQWYLLSLFIGDAVRDVPLCKHLAKRMPC 181


>AE014296-3006|AAF49272.1|  193|Drosophila melanogaster CG7330-PA
           protein.
          Length = 193

 Score =  126 bits (305), Expect = 3e-29
 Identities = 73/171 (42%), Positives = 99/171 (57%), Gaps = 15/171 (8%)
 Frame = +1

Query: 295 CLLSFLLFQCLMEGTGQQTS--FELPVQLIGFPFIIMAVRLTNFVKKLSYALSPATYRSR 468
           C+L  LL + + EG  Q +   FELPVQL+GFP I+++VRL+ F KKL+Y+LSP+TYRSR
Sbjct: 16  CVLLVLLLEFVEEGLAQNSDPLFELPVQLVGFPVIVLSVRLSQFAKKLAYSLSPSTYRSR 75

Query: 469 SRRELLLTDPAEP--FDVVEVEKYIVGEFGAKACVFERVCAHYATR---------ARTQP 615
           +RR     D A P   D    +K I+GEFG +AC+ E  C  +A+R            + 
Sbjct: 76  TRR-----DTAHPLALDAELAQKQILGEFGPQACILEEPCRVHASRYSGSSDGRFPDGKA 130

Query: 616 RPQLDWPDVFSQYK--RSPDQAKEYYLLSVFLGDIVGSPTLCHQLGKRMNC 762
           +P   W +V   YK        K++YLLS+F+GD V    LC  L KRM C
Sbjct: 131 KPHAAWSEVLRNYKVQSGVSGMKQWYLLSLFIGDAVRDVPLCKHLAKRMPC 181


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,926,883
Number of Sequences: 53049
Number of extensions: 740387
Number of successful extensions: 1899
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1893
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4168047156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)