Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_F16
         (909 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    23   5.1  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   5.1  
AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8 ...    23   5.1  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   8.9  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   8.9  

>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 453 VWNWACLNFDFGSRNR 406
           ++ W  ++FDFGS  R
Sbjct: 40  IYEWKHIDFDFGSDER 55


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 366 WNYTIHQTNKDSRFCFYCQN 425
           WN+T+    +D+R  +Y  N
Sbjct: 15  WNHTVSSGERDTRTEYYLPN 34


>AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8
           protein.
          Length = 208

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 10/45 (22%), Positives = 25/45 (55%)
 Frame = +2

Query: 338 TKTMESHQALELHHTPNQQRFQVLFLLPKSKLRHAQFHTLKYKIM 472
           TKT+  +  + +  TP +Q ++  ++LP  + R A+    + +++
Sbjct: 93  TKTLVKNAIVTIDATPFRQWYEGHYVLPLGRKRGAKLTEAEEEVL 137


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -3

Query: 160 YHVYDSTCVDFLRQKRNS*SFSSTAKQMPEI 68
           Y +Y +    FLR K+    +S +  QMP +
Sbjct: 421 YMLYQNILSYFLRYKKLQPQYSQSELQMPGV 451


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -2

Query: 671 PAALPFFSLLDSF 633
           PA LPF   LDSF
Sbjct: 275 PACLPFQHFLDSF 287


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,166
Number of Sequences: 438
Number of extensions: 3842
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29509116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)