Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_F15
(913 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 160 2e-40
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 44 4e-05
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 43 5e-05
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 43 5e-05
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 40 4e-04
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 40 6e-04
SPCC126.01c ||SPCC576.18c|conserved fungal protein|Schizosacchar... 38 0.003
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 37 0.003
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 35 0.018
SPBC32F12.02 |rec14||recombination protein Rec14|Schizosaccharom... 35 0.018
SPAC4D7.05 |sum1|tif34|translation initiation factor eIF3i|Schiz... 34 0.024
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 34 0.024
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 34 0.032
SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pomb... 33 0.043
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 33 0.056
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 33 0.056
SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces pomb... 33 0.056
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 32 0.098
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 32 0.13
SPBC1A4.07c |||U3 snoRNP-associated protein Sof1|Schizosaccharom... 31 0.17
SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces po... 31 0.23
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 31 0.23
SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr 2|... 29 0.92
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 29 0.92
SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces ... 29 0.92
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 29 1.2
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 28 1.6
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 27 2.8
SPAC4F8.11 |||WD repeat protein, human WDR24 family|Schizosaccha... 27 2.8
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 27 2.8
SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces po... 27 2.8
SPAC343.17c |||WD repeat protein, human WDR70 family|Schizosacch... 27 3.7
SPAC806.02c |||Par A family ATPase iron cluster assembly protein... 27 4.9
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 26 6.5
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 26 6.5
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 26 8.5
SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces po... 26 8.5
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 26 8.5
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 26 8.5
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 26 8.5
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 160 bits (389), Expect = 2e-40
Identities = 72/127 (56%), Positives = 92/127 (72%), Gaps = 1/127 (0%)
Frame = +3
Query: 51 FASASPXNIKQWXCPEGKFXQNLSGHNAXVXCLAVNPEGVLVRGGDNGTMYCWDWRTGYN 230
FAS S NIK W PEG F N GHNA V L++N + V+ G DNG+M WDW++G+
Sbjct: 346 FASGSSDNIKHWKFPEGAFMGNFEGHNAIVNTLSINSDNVMFSGADNGSMCFWDWKSGHK 405
Query: 231 FQRLQTAVQPGSMDSEAGIFAMSFDQSGSRLITAEADKTIKIYKEDEAASEETHP-VNWR 407
+Q LQ+ VQPGS+DSEAGIFA SFD++G RLIT EADK++KIYK+ + A+ ETHP + W
Sbjct: 406 YQELQSVVQPGSLDSEAGIFASSFDKTGLRLITCEADKSVKIYKQVDNATPETHPNLPWT 465
Query: 408 PEILKRR 428
P L+RR
Sbjct: 466 PSNLRRR 472
Score = 39.9 bits (89), Expect = 5e-04
Identities = 28/105 (26%), Positives = 44/105 (41%), Gaps = 1/105 (0%)
Frame = +3
Query: 48 LFASASPXNIKQWXCPEGKFXQNLSGHNAXVXCLAVNPE-GVLVRGGDNGTMYCWDWRTG 224
LF+ +K W K ++ GH + V L ++P VLV G + WD RT
Sbjct: 220 LFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARVWDMRTR 279
Query: 225 YNFQRLQTAVQPGSMDSEAGIFAMSFDQSGSRLITAEADKTIKIY 359
N V G + A + FD +++T D TI+++
Sbjct: 280 QNVH-----VLSGHKSTVASLAVQEFD---PQVVTGSMDSTIRLW 316
Score = 35.5 bits (78), Expect = 0.011
Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 1/101 (0%)
Frame = +3
Query: 60 ASPXNIKQWXCPEGKFXQNLSGHNAXVXCLAVNP-EGVLVRGGDNGTMYCWDWRTGYNFQ 236
A IK W G L+GH A V LAV+P L G++ + CWD T +
Sbjct: 182 AGDRTIKIWDLASGVLKLTLTGHIATVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIR 241
Query: 237 RLQTAVQPGSMDSEAGIFAMSFDQSGSRLITAEADKTIKIY 359
G + +G++A+ + L+TA D +++
Sbjct: 242 HYH-----GHL---SGVYALKLHPTLDVLVTAGRDAVARVW 274
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 43.6 bits (98), Expect = 4e-05
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
Frame = +3
Query: 42 LILFASASPXNIKQWXCPEGKFXQNLSGHNAXVXCLAVNPEGV---LVRGGDNGTMYCWD 212
L L A + +I W P GK Q + GH A V P GV L D+GT+ W+
Sbjct: 159 LFLAAGCNDGSIWMWSLPSGKVVQVMYGHTAPVNAGKFIPPGVGKRLATVDDSGTLIVWN 218
Query: 213 WRTGYNFQRLQT---AVQPGSMDSEAGIFAMSFDQSGSRLITAEADKTIKI 356
TG R+ + PG+ ++ AG + + G+ L + +K+
Sbjct: 219 PATGAPECRMSSDDHRFDPGNEETAAGWTSFDCNAEGNVLFLGGSSGKVKV 269
Score = 33.9 bits (74), Expect = 0.032
Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 48 LFASASPXNIKQWXCPEGKFXQNLSGHNAXVXCLAVNPEGV-LVRGGDNGTMYCWD 212
L + + I++W G+ +GH + C+A+ P+G +V G D+ + +D
Sbjct: 341 LLTACADCVIRKWDVRSGQLLGEYTGHQEPILCMAITPDGKRVVTGSDDTELLVFD 396
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 43.2 bits (97), Expect = 5e-05
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = +3
Query: 123 GHNAXVXCLAVNPEGVLVRGGDNGTM-YCWDWRTGYNFQRLQTAVQPGSMDSEAGIFAMS 299
GH+ + +A P+G LV G N + WD R+G + L ++ I AM+
Sbjct: 305 GHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQ--------IVAMA 356
Query: 300 FDQSGSRLITAEADKTIKIYKEDEAASEETHPVN 401
+ +G +L T+ AD T+KI+ + + T P +
Sbjct: 357 WSPNGYQLATSSADDTVKIWDLRKVSLAHTIPAH 390
Score = 31.5 bits (68), Expect = 0.17
Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 1/107 (0%)
Frame = +3
Query: 42 LILFASASPXNIKQWXCPEGKFXQNLSGHNAXVXCLAVNPEG-VLVRGGDNGTMYCWDWR 218
L L A+ + W + L GH A V +A +P G LV + T WD
Sbjct: 236 LTLATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVH 295
Query: 219 TGYNFQRLQTAVQPGSMDSEAGIFAMSFDQSGSRLITAEADKTIKIY 359
TG ++ +Q G + GIF+++ GS + + D +I+
Sbjct: 296 TG-----VELLMQEGHSE---GIFSIACQPDGSLVSSGGNDAIGRIW 334
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 43.2 bits (97), Expect = 5e-05
Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Frame = +3
Query: 45 ILFASASPXNIKQWXCPEGK-FXQNLSGHNAXVXCLAVNPEGVLVRGG--DNGTMYCWDW 215
+LF+S+ +++ W + F + C+AV+P G +V G D+ ++ W
Sbjct: 395 VLFSSSLDGSVRAWDLIRYRNFRTFTAPSRVQFSCIAVDPSGEIVCAGSQDSFEIFMWSV 454
Query: 216 RTGYNFQRLQTAVQPGSMDSEAGIFAMSFDQSGSRLITAEADKTIKIY 359
+TG Q L+T E + ++SF+ SGS L + DKT++I+
Sbjct: 455 QTG---QLLETLA-----GHEGPVSSLSFNSSGSLLASGSWDKTVRIW 494
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 40.3 bits (90), Expect = 4e-04
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Frame = +3
Query: 72 NIKQWXCPEGKFXQNLSGHNAXVX-CLAVNPEGVLVRGGDNGTMYCWDWRTGYNFQRLQT 248
+++ W GKF L GH A V C +LV + T+ WD R+ ++++
Sbjct: 412 SVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRS----KKMKF 467
Query: 249 AVQPGSMDSEAGIFAMSFDQSGSRLITAEADKTIKIY 359
+ PG D +FA+ + G R+ + ADK ++I+
Sbjct: 468 DL-PGHEDQ---VFAVDWSPDGQRVASGGADKAVRIW 500
Score = 30.3 bits (65), Expect = 0.40
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +3
Query: 48 LFASASPXNIKQWXCPEGKFXQNLSGHNAXVXCLAVNPEGVLVRGGDNGT 197
+++S+ I+ W +GK L GH A V L+++ E VL G + T
Sbjct: 283 IYSSSYDKTIRIWDAKDGKCLHILKGHAARVNHLSLSTEHVLRSGAYDHT 332
Score = 29.1 bits (62), Expect = 0.92
Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = +3
Query: 48 LFASASPXNIKQWXCPEGKFXQNLSGHNAXVXCLAVNPE-GVLVRGGDNGTMYCWDWRTG 224
L + + W C + GH V C+A P+ ++ G + T+ WD + G
Sbjct: 150 LVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPDASIIATGSMDNTIRFWDPKKG 209
Score = 28.3 bits (60), Expect = 1.6
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Frame = +3
Query: 21 LHLLGHS-LILFASASPXN-IKQWXCPEGKFXQNLSGHNAXVXCLAVNPEGVLVRGGDNG 194
LHL S L AS S N ++ W LSGH A + C+ + + +
Sbjct: 231 LHLAPDSGPYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWGGQNWIYSSSYDK 290
Query: 195 TMYCWDWRTG 224
T+ WD + G
Sbjct: 291 TIRIWDAKDG 300
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +3
Query: 39 SLILFASASPXNIKQWXCPEGKFXQNLSGHNAXVXCLAVNPEGVLV-RGGDNGTMYCW 209
S +L +S+ +K W K +L GH V + +P+G V GG + + W
Sbjct: 443 SRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAVRIW 500
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 39.5 bits (88), Expect = 6e-04
Identities = 24/109 (22%), Positives = 51/109 (46%), Gaps = 1/109 (0%)
Frame = +3
Query: 36 HSLILFASASPXNIKQWXCPEGKFXQNLSGHNAXVXCLAVNPEGVLVRGGDN-GTMYCWD 212
+S + +S + W G + +GH V +A+ P+G + D+ G ++ WD
Sbjct: 474 NSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWD 533
Query: 213 WRTGYNFQRLQTAVQPGSMDSEAGIFAMSFDQSGSRLITAEADKTIKIY 359
TG +R++T I+++SF + + L++ +D T++ +
Sbjct: 534 IGTG---RRIKT-----MRGHRGNIYSLSFSRESTVLVSGGSDCTVRAW 574
Score = 35.5 bits (78), Expect = 0.011
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +3
Query: 33 GHSLILFASASPXNIKQWXCPEGKFXQNLSGHNAXVXCLAVNPEG-VLVRGGDNGTMYCW 209
GH++ ++ S I W G+ + + GH + L+ + E VLV GG + T+ W
Sbjct: 517 GHTMA--SADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTVRAW 574
Query: 210 D-WRTGYN 230
D ++T YN
Sbjct: 575 DVFKTNYN 582
Score = 31.9 bits (69), Expect = 0.13
Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Frame = +3
Query: 51 FASASPXNIKQ-WXCPEGKFXQNLSGHNAXVXCLAVNPEGVLV-RGGDNGTMYCWDWRTG 224
FA+AS Q W C + +GH + V C+ +P V G + T WD G
Sbjct: 436 FATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRG 495
Query: 225 YNFQRLQTAVQP 260
++ + QP
Sbjct: 496 HSVRVFNGHTQP 507
>SPCC126.01c ||SPCC576.18c|conserved fungal
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 369
Score = 37.5 bits (83), Expect = 0.003
Identities = 29/127 (22%), Positives = 55/127 (43%), Gaps = 4/127 (3%)
Frame = +3
Query: 21 LHLLGHSLILFASASPXNIKQWXCPE--GKFXQNLSGHNAXVXCLAVNPE-GVLVRGGDN 191
L LL +L + ++ ++ W + L+GH+ + C+ P + G
Sbjct: 138 LLLLEEEGLLLSGSTDASLIVWDVSSQPSRLLYKLTGHSRGIECITRQPNTDIFWTCGSE 197
Query: 192 GTMYCWDWRTGYNFQRLQTAVQPGSMDSEAGIFAMSFD-QSGSRLITAEADKTIKIYKED 368
++ CW T +L+ + G ++ ++ + FD Q L TA ADKT++ +
Sbjct: 198 SSIRCWHI-TKVGGSQLE---EEGFWGHQSNVYCLLFDPQDSEALWTASADKTVREWSLY 253
Query: 369 EAASEET 389
+ EET
Sbjct: 254 QGIHEET 260
Score = 36.7 bits (81), Expect = 0.005
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 48 LFASASPXNIKQWXCPEGKFXQNLSGHNAXVXC-LAVNPEGVLVRGGDNGTMYCWD 212
++ + IK+W G+ + L GH V C L + EG+L+ G + ++ WD
Sbjct: 105 IYTGSWDHTIKKWNVSTGECVETLIGHTDYVKCLLLLEEEGLLLSGSTDASLIVWD 160
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 37.1 bits (82), Expect = 0.003
Identities = 28/108 (25%), Positives = 48/108 (44%)
Frame = +3
Query: 48 LFASASPXNIKQWXCPEGKFXQNLSGHNAXVXCLAVNPEGVLVRGGDNGTMYCWDWRTGY 227
+ + +S I+ + GK + L GH + + N E + V GG +GT+ W++ TG
Sbjct: 402 IVSGSSDLTIRIFEASSGKLLRMLQGHEDLIRTVRFNDEKI-VSGGYDGTVRIWNFNTGE 460
Query: 228 NFQRLQTAVQPGSMDSEAGIFAMSFDQSGSRLITAEADKTIKIYKEDE 371
Q V S +S +F + FD R+I I ++ D+
Sbjct: 461 -----QHCVLHNSRNSR--VFGLQFDH--RRIIACTHSSEILVWNFDD 499
Score = 35.9 bits (79), Expect = 0.008
Identities = 26/115 (22%), Positives = 46/115 (40%), Gaps = 1/115 (0%)
Frame = +3
Query: 45 ILFASASPXNIKQWXCPEGKFXQNLSGHNAXVXCLAV-NPEGVLVRGGDNGTMYCWDWRT 221
I+ + + + W L GH+ V CL +LV G + T+ WDW+
Sbjct: 233 IMVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWDWQ- 291
Query: 222 GYNFQRLQTAVQPGSMDSEAGIFAMSFDQSGSRLITAEADKTIKIYKEDEAASEE 386
R V G D+ G+ S + +I++ D T ++++ D + E
Sbjct: 292 ----NRRPLKVYFGHTDNVLGVVV-----SENYIISSSRDHTARVWRLDATSPAE 337
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 34.7 bits (76), Expect = 0.018
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +3
Query: 117 LSGHNAXVXCLAVNPEGVLVRGGDNGTMYCWDWRTGYNFQRL 242
L+ H A V LA++ + VL+ G D+ T+ WD TG Q L
Sbjct: 431 LTSHTAPVTALALSSDDVLITGADDKTVRQWDIVTGRCIQTL 472
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/55 (23%), Positives = 26/55 (47%)
Frame = +3
Query: 48 LFASASPXNIKQWXCPEGKFXQNLSGHNAXVXCLAVNPEGVLVRGGDNGTMYCWD 212
L +++ +K W + +L GH+ V CLA+ + + G + T+ W+
Sbjct: 347 LATASTDKTVKVWDMAGVVYLGSLKGHSDYVSCLAIQ-DSFIATGSMDTTVRLWN 400
>SPBC32F12.02 |rec14||recombination protein
Rec14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 34.7 bits (76), Expect = 0.018
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Frame = +3
Query: 99 GKFXQNLSGHNAXVXCLAVNPEGVLVRG-GDNGTMYCWDWRTGYNFQRLQTAVQPGSMDS 275
G+ LSGH + V +A +P L+ GD+ + +D +G +L+
Sbjct: 177 GRLFHVLSGHTSPVRSVAFSPGSTLLAAAGDSKMITIYDVLSGDQVGQLR--------GH 228
Query: 276 EAGIFAMSFDQSGSRLITAEADKTIKIYKED 368
A IFA++F+ G L++A+ + IKI+ D
Sbjct: 229 AAWIFAVAFNPVGDLLLSADVEGKIKIWDID 259
Score = 33.9 bits (74), Expect = 0.032
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 1/109 (0%)
Frame = +3
Query: 39 SLILFASASPXNIKQWXCPEGKFXQNLSGHNAXVXCLAVNPEGVLVRGGD-NGTMYCWDW 215
S +L A+ I + G L GH A + +A NP G L+ D G + WD
Sbjct: 199 STLLAAAGDSKMITIYDVLSGDQVGQLRGHAAWIFAVAFNPVGDLLLSADVEGKIKIWDI 258
Query: 216 RTGYNFQRLQTAVQPGSMDSEAGIFAMSFDQSGSRLITAEADKTIKIYK 362
T + + T +++ I+A+++ ++G I A ADK+I+ Y+
Sbjct: 259 DT---MECIST-----QSETDGAIWAVAWYKNG--FIVAGADKSIRWYR 297
>SPAC4D7.05 |sum1|tif34|translation initiation factor
eIF3i|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 34.3 bits (75), Expect = 0.024
Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Frame = +3
Query: 45 ILFASASPXNIKQWXCPEGKFXQNLSGHNAXVXCLAVNPEGVL-VRGGDNGTMYCWDWRT 221
+LF+ A I W G+ GH + +N L V G + TM WD +T
Sbjct: 24 LLFSCAKDKVINVWFSHNGERLGTYEGHTGAIWTCDINKSSTLMVSGAADNTMRLWDVKT 83
Query: 222 GYNFQRLQ--TAVQPGSM-DSEAGIFAMSFDQSG 314
G + + TAV+ + + I A++ ++ G
Sbjct: 84 GKQLYKWEFPTAVKRVEFNEDDTRILAVTEERMG 117
>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 662
Score = 34.3 bits (75), Expect = 0.024
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 7/55 (12%)
Frame = +3
Query: 102 KFXQNLSGHNAXVXCLA-----VNPEGVL--VRGGDNGTMYCWDWRTGYNFQRLQ 245
KF L H V C+ + P G + V G D+G+++CWD +TG + Q Q
Sbjct: 208 KFRYCLDSHADSVTCIDALTGDLPPTGEIGMVTGSDDGSVHCWDVKTGVSLQSFQ 262
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 33.9 bits (74), Expect = 0.032
Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
Frame = +3
Query: 33 GHSLILFASASPXNIKQWXCPEGKFXQNLSGHNAXVXCLAVNPE-GVLVRGGDNGTMYCW 209
G+ IL + + +I+ W G+ +L GH+ + + PE + + G + ++ W
Sbjct: 515 GYGDILVSGSYDSSIRIWRVSTGECLYHLRGHSLRIYSVLYEPERNICISGSMDKSIRVW 574
Query: 210 DWRTGYNFQRLQTAVQPGSMDSEAGIFAMSFDQSGSRLITAEADKTIKIY 359
D TG L+ +A + ++ Q +RLI+ AD TI+I+
Sbjct: 575 DLSTGTCKYVLE--------GHDAFVTLLNVFQ--NRLISGSADSTIRIW 614
Score = 26.6 bits (56), Expect = 4.9
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +3
Query: 48 LFASASPXNIKQWXCPEGKFXQNLSGHNAXVXCLAVNPEGVLVRGGDNGTMYCWDWRTG 224
L + ++ I+ W GK L ++ + V+ E ++ G D G++ WD RTG
Sbjct: 602 LISGSADSTIRIWDLNTGKPLMVLPSNSGYISSF-VSDEHKIISGND-GSVKLWDVRTG 658
>SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 494
Score = 33.5 bits (73), Expect = 0.043
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Frame = +3
Query: 57 SASPXNIKQWXCPEGKFX--QNLSGHNAXVXCLAVNPEGV-LVRGGDNGTMYCW---DWR 218
SA +IK W G+ + LS H + CLA+N E L+ GG +G + + DW+
Sbjct: 224 SAGGPSIKVWDLVAGRQTPTKKLSNHQKSITCLAMNSENTRLLSGGLDGHVKIYNISDWK 283
Query: 219 T----GYNFQRLQTAVQPGSMDSEAGIFAMSFDQSGSRLITAEADKT 347
Y+ L + P S + G+ + Q R+ + KT
Sbjct: 284 VVHGMKYSGPILSMGLSPDSCNLVVGMSNGTLSQRTRRITKQTSSKT 330
Score = 32.7 bits (71), Expect = 0.074
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +3
Query: 75 IKQWXCPEGKFXQNLSGHNAXVXCLAVNPEGVLVRGGDNGTMYCWDWR 218
+K W G +LSGH V + LV GG +GT+ WD R
Sbjct: 148 VKVWDLSTGAVQYDLSGHEDYVRTASWMSATRLVSGGYDGTIRLWDTR 195
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 33.1 bits (72), Expect = 0.056
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Frame = +3
Query: 48 LFASASPXN-IKQWXCPEGKFXQNLSGHNAXVXCLAVNP-EGVLVRGGDNGTMYCWDWRT 221
+ ASAS IK W G+ L GH V + NP L G + T+ W+ T
Sbjct: 479 IIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVDT 538
Query: 222 GYNFQRLQTAVQPGSMDSEAG-IFAMSFDQSGSRLITAEADKTIKIY 359
Q VQ +++ G I + + G+++++A AD +K++
Sbjct: 539 -------QQCVQ--TLEGHTGAILKLIYISQGTQVVSAAADGLVKVW 576
Score = 28.7 bits (61), Expect = 1.2
Identities = 17/67 (25%), Positives = 32/67 (47%)
Frame = +3
Query: 162 EGVLVRGGDNGTMYCWDWRTGYNFQRLQTAVQPGSMDSEAGIFAMSFDQSGSRLITAEAD 341
E +L G+ + WDW++G RL V ++ A I + F S + L++ +D
Sbjct: 245 EKILYTAGEGNLILAWDWKSG---SRLDPGVDTTHSETNAIIQVVPF--SENTLLSVHSD 299
Query: 342 KTIKIYK 362
++ + K
Sbjct: 300 LSLLLRK 306
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 33.1 bits (72), Expect = 0.056
Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Frame = +3
Query: 93 PEGKFXQNLSGHNAXVXCLAVNPEGVL-VRGGDNGTMYCWDWRTGYNFQRLQTAVQPGSM 269
PEG +GH V +AV+P+ + G + +M WD +TG ++ Q G
Sbjct: 526 PEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQ-----GHK 580
Query: 270 DSEAGIFAMSFDQSGSRLITAEADKTIKIYKEDEAA 377
+S + ++ F G + + D +I+ D A+
Sbjct: 581 NS---VISVCFSPDGRQFASGSGDLRARIWSIDPAS 613
Score = 25.8 bits (54), Expect = 8.5
Identities = 24/117 (20%), Positives = 50/117 (42%), Gaps = 1/117 (0%)
Frame = +3
Query: 15 YXLHLLGHSLILFASASPXNIKQWXCPEGKFXQNLSGHNAXVXCLAVNPEGVLVRGGD-N 191
Y L + + + + + W G+ L N V +A++P + G +
Sbjct: 406 YSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLEIENG-VTAIAISPNDQFIAVGSLD 464
Query: 192 GTMYCWDWRTGYNFQRLQTAVQPGSMDSEAGIFAMSFDQSGSRLITAEADKTIKIYK 362
+ W +G +RL+ G +S +++++F S L++ DKTIK+++
Sbjct: 465 QIIRVWSV-SGTLVERLE-----GHKES---VYSIAFSPDSSILLSGSLDKTIKVWE 512
>SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 33.1 bits (72), Expect = 0.056
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 123 GHNAXVXCLAVNPEGV-LVRGGDNGTMYCWDWRTG 224
GH V CL+V+ G L GGD+G + W+ TG
Sbjct: 377 GHKGRVRCLSVHVSGNWLASGGDDGVLRIWEVMTG 411
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 32.3 bits (70), Expect = 0.098
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Frame = +3
Query: 117 LSGHNAXVXCLAVNPEG--VLVRGGDNGTMYCWDWRTGYNFQRLQTAVQPGSMDSEAGIF 290
L GH+ V + +P VL + T+ WD G L+ V SM
Sbjct: 130 LKGHSRKVGLVQYHPTAANVLASSSADNTIKLWDCEKGVAHVSLKMDVMCQSM------- 182
Query: 291 AMSFDQSGSRLITAEADKTIKIY 359
SF+ G+RL+T DK ++++
Sbjct: 183 --SFNADGTRLVTTSRDKKVRVW 203
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 31.9 bits (69), Expect = 0.13
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 75 IKQWXCPEGKFXQNLSGHNAXVXCLAVNPEGVL-VRGGDNGTMYCWD 212
+K W + GH V + ++P+G L GG +GT+ WD
Sbjct: 174 VKVWDLETFSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWD 220
>SPBC1A4.07c |||U3 snoRNP-associated protein
Sof1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 436
Score = 31.5 bits (68), Expect = 0.17
Identities = 18/73 (24%), Positives = 34/73 (46%)
Frame = +3
Query: 174 VRGGDNGTMYCWDWRTGYNFQRLQTAVQPGSMDSEAGIFAMSFDQSGSRLITAEADKTIK 353
V G ++ +Y +D R N +R + D + + ++ F +G ++ DKTI+
Sbjct: 246 VAGSEDHNLYMYDMR---NLKRALHVYK----DHVSAVMSVDFSPTGQEFVSGSYDKTIR 298
Query: 354 IYKEDEAASEETH 392
IY E S + +
Sbjct: 299 IYNVREGHSRDVY 311
>SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1313
Score = 31.1 bits (67), Expect = 0.23
Identities = 18/70 (25%), Positives = 31/70 (44%)
Frame = +3
Query: 162 EGVLVRGGDNGTMYCWDWRTGYNFQRLQTAVQPGSMDSEAGIFAMSFDQSGSRLITAEAD 341
E L+ GD + WDWR +T+ S + + + + L+T +D
Sbjct: 1002 EDQLITLGDKDIIQVWDWRRNRCLNSFKTS---ASATTNVTDMQLLNEDDVALLMTGSSD 1058
Query: 342 KTIKIYKEDE 371
TIK+Y++ E
Sbjct: 1059 GTIKLYRDYE 1068
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 31.1 bits (67), Expect = 0.23
Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 5/110 (4%)
Frame = +3
Query: 75 IKQWXCPEGKFXQNLSGHNAXVXCLAVNPEG-VLVRGGDNGTMYCWDWRTGYNFQRLQTA 251
I+ W G + L GH V +A +P+G LV G + T+ W+ + N
Sbjct: 441 IRIWTS-SGTLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYK 499
Query: 252 VQPGSMDSEAG----IFAMSFDQSGSRLITAEADKTIKIYKEDEAASEET 389
+ G I +++ G +I+ D+TI+ + D S+ T
Sbjct: 500 EGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLT 549
>SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 612
Score = 29.1 bits (62), Expect = 0.92
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 7/87 (8%)
Frame = +3
Query: 123 GHNAXVXCLAVNPEGV--LVRGGDNGTMYCWDW---RTGYNFQRLQT--AVQPGSMDSEA 281
GH V C+ V P+ + GG +GT+ CW +T + ++ T + G D
Sbjct: 337 GHEGPVLCVCV-PKATHHIFSGGHDGTIRCWSLPANQTSDSISKILTGSTIFQGHEDCVW 395
Query: 282 GIFAMSFDQSGSRLITAEADKTIKIYK 362
+F + L++ +D T++ +K
Sbjct: 396 ELFCHEVKDNNPILLSLSSDGTVRGWK 422
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 29.1 bits (62), Expect = 0.92
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Frame = +3
Query: 48 LFASASPXNIKQWXCPEGKFXQNLSGHNAXVXCLAVNPEG--VLVRGGDNGTMYCW 209
+ + + I+ W GK LSGH V +A NP GD+ T+ W
Sbjct: 443 VLSGSEDDKIRIWHRESGKLLATLSGHVKCVNYVAYNPVDPYQFASAGDDNTVRIW 498
>SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 29.1 bits (62), Expect = 0.92
Identities = 30/127 (23%), Positives = 50/127 (39%), Gaps = 7/127 (5%)
Frame = +3
Query: 51 FASASPX-NIKQWXCPEGKFXQNLSGHNAXVXCLAVNP-EGVLVRGGDNGTMYCWDWRTG 224
F +AS ++K W L+GH V + +P +G+L G + + WD RTG
Sbjct: 179 FVTASDDGSLKVWNFHMSTEELKLTGHGWDVKTVDWHPSKGLLASGSKDNLVKFWDPRTG 238
Query: 225 YNFQRL---QTAVQPGSMDSEAG--IFAMSFDQSGSRLITAEADKTIKIYKEDEAASEET 389
L + + S G A S R+ A K +++ + E ++
Sbjct: 239 TCIATLHGHKNTIMQASFQKNFGSNYLATVSRDSTCRVFDLRAMKDVRVLRGHE---KDV 295
Query: 390 HPVNWRP 410
+ V W P
Sbjct: 296 NCVTWHP 302
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 28.7 bits (61), Expect = 1.2
Identities = 22/94 (23%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = +3
Query: 111 QNLSGHNAXVXCLAVNPEGVLVRG-GDNGTMYCWDWRTGYNFQRLQTAVQPGSMDSEAGI 287
+ L GH+ + L + + LV G + ++ W+ G F+RL+ ++ +
Sbjct: 128 RRLLGHDNDIQDLCWSYDSQLVVSVGLDSSIIVWN---GTTFERLKRIEA-----HQSHV 179
Query: 288 FAMSFDQSGSRLITAEADKTIKIYKEDEAASEET 389
++FD +G T D+TIK+++ + + E+T
Sbjct: 180 KGITFDPAGKYFATESDDRTIKVWRVSDFSIEKT 213
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 28.3 bits (60), Expect = 1.6
Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 1/108 (0%)
Frame = +3
Query: 39 SLILFASASPXNIKQWXCPEGKFXQNLSGHNAXVXCLAVNPEGV-LVRGGDNGTMYCWDW 215
S L +++ I+ W + + L GH V + NP G LV G + T+ W+
Sbjct: 108 SKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNL 167
Query: 216 RTGYNFQRLQTAVQPGSMDSEAGIFAMSFDQSGSRLITAEADKTIKIY 359
+ G + L +P I ++S G+ TA D +I+
Sbjct: 168 QDGTCLRMLPAHSEP--------IISVSISADGTLCATASYDGMARIW 207
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +3
Query: 117 LSGHNAXVXCLAVNPEGVLVRGGDNGTMYCWDWRT 221
+ GH A V LA++ ++ G NG++ W+ +T
Sbjct: 392 IPGHRADVRTLALSANHDVILSGANGSLKLWNKKT 426
Score = 26.2 bits (55), Expect = 6.5
Identities = 14/54 (25%), Positives = 23/54 (42%)
Frame = +3
Query: 51 FASASPXNIKQWXCPEGKFXQNLSGHNAXVXCLAVNPEGVLVRGGDNGTMYCWD 212
F + ++ W L GH++ V LAV P V V G + ++ W+
Sbjct: 634 FTCSKDREVRYWDGKSFDLILKLRGHHSEVWALAVGPTFV-VSGSHDHSIRLWE 686
>SPAC4F8.11 |||WD repeat protein, human WDR24
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 846
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 117 LSGHNAXVXCLAVNPEGV-LVRGGDNGTMYCWD 212
L+ HN V C+ +P GV L G + T+ WD
Sbjct: 217 LAAHNGVVLCVNYSPNGVFLASCGRDKTIRIWD 249
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +3
Query: 48 LFASASPXNIKQWXCPEGKFXQNLSGHNAXVXCLAVNPEGVLVRGGDNGTMYCWD 212
LF+ + IKQW + K L GH V +A + L+ G +G + W+
Sbjct: 447 LFSCSLDGTIKQWDIEKKKCVHTLFGHIEGVWEIAAD-HLRLISGAHDGVVKVWE 500
>SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 51 FASASPXNIKQWXCPEGKFXQNLSGHNAXVXCLA-VNPEGVLVRGGDNGTMYCW 209
FAS S + + +G+F L GH + V L ++ + ++ G++ T+ W
Sbjct: 189 FASCSNDGVIKLWTSDGEFLYELHGHTSFVYSLTYIHNQQLIASCGEDRTIRIW 242
>SPAC343.17c |||WD repeat protein, human WDR70
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 576
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 297 SFDQSGSRLITAEADKTIKIYKEDEAASEETHP 395
+FD++GSR T D TI + + ++ HP
Sbjct: 96 TFDKNGSRFYTGSLDNTIHCWDLNGLSATNPHP 128
>SPAC806.02c |||Par A family ATPase iron cluster assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 608
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +3
Query: 117 LSGHNAXVXCLAVNPEGVLVRGGDN-GTMYCW 209
L GH V LA +P G + DN G ++ W
Sbjct: 463 LQGHTNTVWALAFSPNGNTLASADNDGNVFLW 494
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 26.2 bits (55), Expect = 6.5
Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +3
Query: 48 LFASASPXNIKQWXCPEGKFXQNLSGHNAXVXCLAVNP-EGVLVRGGDNGTMYCWD 212
+ + + I+ W L+GH+ V C A +P E ++V + T+ WD
Sbjct: 110 ILSCSDDQTIRIWNWQSRNCIAILTGHSHYVMCAAFHPSEDLIVSASLDQTVRVWD 165
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 26.2 bits (55), Expect = 6.5
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
Frame = +3
Query: 102 KFXQNLSGHNAXVXCLAVNPEGVLVRGGD--NGTMYCWDWRTGYNFQRLQTAVQPGSMDS 275
K Q GH+ V LA+NP+ +GT+ W + + LQ
Sbjct: 132 KCVQTFEGHSRYVMSLAINPKDTNTFASSCLDGTVKVWSFGSSVANFTLQA--------H 183
Query: 276 EAGIFAMSFDQSGSR--LITAEADKTIKIY 359
+ G+ +++ +G + LITA D IK++
Sbjct: 184 DRGVNYVNYYPAGDKPYLITAGDDNLIKVW 213
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 25.8 bits (54), Expect = 8.5
Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = +3
Query: 156 NPEGVLVRGGDNGTMYC-WDWRT 221
+P+G V GD+ C WDW+T
Sbjct: 495 SPDGRFVFSGDSSGNACFWDWKT 517
>SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 556
Score = 25.8 bits (54), Expect = 8.5
Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +3
Query: 84 WXCPEGKFXQNLSGHNAXVXCLAVNPEGV-LVRGGDNGTMYCW 209
W P L GH V LA++P G +V G + T+ W
Sbjct: 489 WNYPSVSRVGTLKGHTDRVLYLAMSPNGENIVTGAADETLRFW 531
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/50 (24%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +3
Query: 72 NIKQWXCPEGKFXQNLSGHNAXVXCLAVNPEG-VLVRGGDNGTMYCWDWR 218
+I+ W C K +L GH V + ++ +G ++ + T+ W R
Sbjct: 197 DIQLWDCVSKKRITDLVGHTDNVRDILISDDGRTILTASSDATIKLWSLR 246
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = +3
Query: 39 SLILFASASPXNIKQWXCPEGKFXQNLSGHNAXVXCLAVN 158
S L ++S + W G+ + SGH+ C+A+N
Sbjct: 271 STYLVTASSDHVARLWELSSGETIRQYSGHHKAAVCVALN 310
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 25.8 bits (54), Expect = 8.5
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +3
Query: 132 AXVXCLAVNPEGVLVRGGD-NGTMYCWDWRTGYNFQRLQTAVQPGSMDSEAGIFAMSFDQ 308
A + CLA +P+G + GD +G + +D + A G I MS++
Sbjct: 480 APITCLAYSPDGKYLACGDASGKVVLYD-ANSREVITSRWAFHTGR------ILGMSWNA 532
Query: 309 SGSRLITAEADKTIKIY 359
+ L TA D I IY
Sbjct: 533 KSTHLATASLDTNIHIY 549
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,926,932
Number of Sequences: 5004
Number of extensions: 22662
Number of successful extensions: 152
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 146
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 462505890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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