Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_F12
(898 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 118 2e-25
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 91 5e-17
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 86 1e-15
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 66 1e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 56 2e-06
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 46 0.001
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 44 0.004
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 44 0.005
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.086
UniRef50_A6SWU5 Cluster: Uncharacterized conserved protein; n=1;... 36 1.4
UniRef50_Q605G5 Cluster: Putative formylmethanofurane dehydrogen... 35 3.2
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.7
UniRef50_A3MA42 Cluster: Putative uncharacterized protein; n=1; ... 33 9.9
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 118 bits (284), Expect = 2e-25
Identities = 68/112 (60%), Positives = 69/112 (61%)
Frame = +1
Query: 481 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLSDL 660
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALL
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 661 PLTEXTGYLXPPFLPFGEAWXXXXXXXXXXXXXGVXSFAPSWAVCTKPPVXP 816
T PPF EAW SFAPSWAVCT PP P
Sbjct: 62 CRLPDT---CPPF-SLREAWRFLIAHAVGISVR-CRSFAPSWAVCTNPPFSP 108
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 90.6 bits (215), Expect = 5e-17
Identities = 43/51 (84%), Positives = 45/51 (88%)
Frame = +1
Query: 499 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALL 651
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL APSCALL
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALL 94
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 86.2 bits (204), Expect = 1e-15
Identities = 41/49 (83%), Positives = 42/49 (85%)
Frame = +1
Query: 505 RPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALL 651
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL APSCALL
Sbjct: 78 RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALL 126
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +3
Query: 312 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLT 410
R +C G +PLPRSLTR ARSFGCGERY+LT
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 66.1 bits (154), Expect = 1e-09
Identities = 40/60 (66%), Positives = 41/60 (68%)
Frame = -3
Query: 554 MLVRGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVITLILWITVLPPLSELIPLAAAERP 375
MLVRGAEPMEKR + L V LL CS L LILWITVLPPLSEL PLAA ERP
Sbjct: 1 MLVRGAEPMEKRLRCWLLPVLCFLLT-CSFRL---YPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 55.6 bits (128), Expect = 2e-06
Identities = 31/54 (57%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +3
Query: 288 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQG 446
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQG 319
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 46.4 bits (105), Expect = 0.001
Identities = 25/68 (36%), Positives = 37/68 (54%)
Frame = +1
Query: 448 ITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL 627
I +R + + + P T F S PLT+ITKI Q + +T+ +YK T FPL
Sbjct: 44 IMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPL 103
Query: 628 EAPSCALL 651
++PS +LL
Sbjct: 104 QSPSYSLL 111
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 90 DPDMIRYIDEFGQTTTRMQ 146
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 44.4 bits (100), Expect = 0.004
Identities = 28/62 (45%), Positives = 34/62 (54%)
Frame = -2
Query: 804 GFRAHSPAWSERPYTRTEIPTA*AXRXAPRFPEGEKXRXQVSGXLRKRQVGQESARGSFQ 625
G RA+SPAWSERP + + + APRFP+G+K QVSG KRQ A
Sbjct: 27 GVRAYSPAWSERPKPSRDTSSV-SYEKAPRFPKGKKAE-QVSG---KRQGRNRRAHEGAA 81
Query: 624 GE 619
GE
Sbjct: 82 GE 83
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 44.0 bits (99), Expect = 0.005
Identities = 23/41 (56%), Positives = 27/41 (65%)
Frame = +1
Query: 214 INKLTTTIAFILCFRFRVEVWEVFSALMNRPTRGERRFAYW 336
+++LT L RF V V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.086
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1
Query: 358 ERGSGRAPNTQTASPRALADSLMQ 287
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A6SWU5 Cluster: Uncharacterized conserved protein; n=1;
Janthinobacterium sp. Marseille|Rep: Uncharacterized
conserved protein - Janthinobacterium sp. (strain
Marseille) (Minibacterium massiliensis)
Length = 212
Score = 35.9 bits (79), Expect = 1.4
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = -3
Query: 581 PLT*ASIFVMLVRGAEPMEKRQQRGL---FTVPGLLLAFCSHVLSCVITLILWITVLPPL 411
PLT AS+ + L+ P+ + + RGL T+ G ++A +S V L+L T+L PL
Sbjct: 50 PLTVASLIMFLIANLFPIVEIELRGLRSQTTLTGAVMALAGEGMSLVAMLVLATTLLFPL 109
Query: 410 SELIPL 393
+L+ L
Sbjct: 110 LQLLIL 115
>UniRef50_Q605G5 Cluster: Putative formylmethanofurane
dehydrogenase, subunit; n=1; Methylococcus
capsulatus|Rep: Putative formylmethanofurane
dehydrogenase, subunit - Methylococcus capsulatus
Length = 572
Score = 34.7 bits (76), Expect = 3.2
Identities = 18/41 (43%), Positives = 20/41 (48%)
Frame = +3
Query: 549 EHHKNRRSSQRWRNPTGL*RYQAFPPGSSLVRSPVRPAAYG 671
E H N S RW NP GL F P +RSP+ PA G
Sbjct: 77 EQHWN--SMARWLNPPGLTPSMGFAPSGPALRSPLAPAGLG 115
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.7
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -3
Query: 248 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 84
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_A3MA42 Cluster: Putative uncharacterized protein; n=1;
Acinetobacter baumannii ATCC 17978|Rep: Putative
uncharacterized protein - Acinetobacter baumannii
(strain ATCC 17978 / NCDC KC 755)
Length = 183
Score = 33.1 bits (72), Expect = 9.9
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = -3
Query: 554 MLVRGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVITLILWITVLPPLSELIPLAAA 384
ML A+ + + ++ GL G+ L C H+++ + L ++P L ++I + A
Sbjct: 1 MLYTAAQTLSRGRKSGLMAAFGIFLGGCFHIIAASLGLTTIFQIIPKLYDIIKILGA 57
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 797,168,065
Number of Sequences: 1657284
Number of extensions: 15112629
Number of successful extensions: 38410
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 36906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38399
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81161904978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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