Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_F10
         (980 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            29   0.16 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   6.0  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 29.5 bits (63), Expect = 0.16
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +2

Query: 818 PGPPXXPPXGPPPS 859
           P PP  PP GPPPS
Sbjct: 583 PAPPPPPPMGPPPS 596



 Score = 24.6 bits (51), Expect = 4.6
 Identities = 12/26 (46%), Positives = 12/26 (46%), Gaps = 1/26 (3%)
 Frame = +1

Query: 226 PPFG-GXXGXXPXXXXLXXXPPPPPG 300
           PP G G  G       L   PPPPPG
Sbjct: 512 PPHGAGYDGRDLTGGPLGPPPPPPPG 537



 Score = 22.6 bits (46), Expect(2) = 2.3
 Identities = 14/42 (33%), Positives = 15/42 (35%)
 Frame = +2

Query: 824 PPXXPPXGPPPSGXLXSXFFPXXFPSXWGXPPAPXXFSPXGG 949
           P   PP  PPP             P   G PP+P    P GG
Sbjct: 577 PNAQPPPAPPP-------------PPPMGPPPSPLAGGPLGG 605



 Score = 21.0 bits (42), Expect(2) = 2.3
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +2

Query: 713 PXGGPPPPXXG 745
           P G PPPP  G
Sbjct: 527 PLGPPPPPPPG 537


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 6.0
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = -3

Query: 960 HXPPPPXGEKXXGAGGXP 907
           H PPP  G     AGG P
Sbjct: 683 HIPPPAHGSLNLSAGGSP 700


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 557,571
Number of Sequences: 2352
Number of extensions: 9813
Number of successful extensions: 24
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 107296839
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)