Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_F10
(980 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 40 0.004
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 35 0.10
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.3
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.3
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.3
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z75549-6|CAC42343.1| 74|Caenorhabditis elegans Hypothetical pr... 30 2.9
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 30 2.9
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 30 2.9
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 29 3.8
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 3.8
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 3.8
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 3.8
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 3.8
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 5.1
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 6.7
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 29 6.7
Z81472-1|CAB03889.1| 173|Caenorhabditis elegans Hypothetical pr... 28 8.8
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 39.5 bits (88), Expect = 0.004
Identities = 27/78 (34%), Positives = 28/78 (35%)
Frame = +2
Query: 713 PXGGPPPPXXGXXXPXSXXXXXXXXXXXXXXXXXXPGPPXXPPXGPPPSGXLXSXFFPXX 892
P GGPP P P S PGP P G PPSG F P
Sbjct: 342 PSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGP--FDPSGAPPSGGPPGPFDPSG 399
Query: 893 FPSXWGXPPAPXXFSPXG 946
P G PP P F+P G
Sbjct: 400 APPS-GGPPGP--FNPSG 414
Score = 39.5 bits (88), Expect = 0.004
Identities = 27/78 (34%), Positives = 28/78 (35%)
Frame = +2
Query: 713 PXGGPPPPXXGXXXPXSXXXXXXXXXXXXXXXXXXPGPPXXPPXGPPPSGXLXSXFFPXX 892
P GGPP P P S PGP P G PPSG F P
Sbjct: 357 PSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGP--FDPSGAPPSGGPPGPFNPSG 414
Query: 893 FPSXWGXPPAPXXFSPXG 946
P G PP P F+P G
Sbjct: 415 APPS-GGPPGP--FNPSG 429
Score = 39.1 bits (87), Expect = 0.005
Identities = 27/78 (34%), Positives = 27/78 (34%)
Frame = +2
Query: 713 PXGGPPPPXXGXXXPXSXXXXXXXXXXXXXXXXXXPGPPXXPPXGPPPSGXLXSXFFPXX 892
P GGPP P P S PGP P G PPSG F P
Sbjct: 237 PSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGP--FDPSGAPPSGGPPGPFDPSG 294
Query: 893 FPSXWGXPPAPXXFSPXG 946
P G PP P F P G
Sbjct: 295 APPS-GGPPGP--FDPSG 309
Score = 39.1 bits (87), Expect = 0.005
Identities = 27/78 (34%), Positives = 27/78 (34%)
Frame = +2
Query: 713 PXGGPPPPXXGXXXPXSXXXXXXXXXXXXXXXXXXPGPPXXPPXGPPPSGXLXSXFFPXX 892
P GGPP P P S PGP P G PPSG F P
Sbjct: 327 PSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGP--FDPSGAPPSGGPPGPFDPSG 384
Query: 893 FPSXWGXPPAPXXFSPXG 946
P G PP P F P G
Sbjct: 385 APPS-GGPPGP--FDPSG 399
Score = 39.1 bits (87), Expect = 0.005
Identities = 27/78 (34%), Positives = 28/78 (35%)
Frame = +2
Query: 713 PXGGPPPPXXGXXXPXSXXXXXXXXXXXXXXXXXXPGPPXXPPXGPPPSGXLXSXFFPXX 892
P GGPP P P S PGP P G PPSG F P
Sbjct: 372 PSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGP--FNPSGAPPSGGPPGPFNPSG 429
Query: 893 FPSXWGXPPAPXXFSPXG 946
P G PP P F+P G
Sbjct: 430 APPS-GGPPGP--FNPSG 444
Score = 39.1 bits (87), Expect = 0.005
Identities = 27/78 (34%), Positives = 28/78 (35%)
Frame = +2
Query: 713 PXGGPPPPXXGXXXPXSXXXXXXXXXXXXXXXXXXPGPPXXPPXGPPPSGXLXSXFFPXX 892
P GGPP P P S PGP P G PPSG F P
Sbjct: 387 PSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGP--FNPSGAPPSGGPPGPFNPSG 444
Query: 893 FPSXWGXPPAPXXFSPXG 946
P G PP P F+P G
Sbjct: 445 APPS-GGPPGP--FNPSG 459
Score = 39.1 bits (87), Expect = 0.005
Identities = 27/78 (34%), Positives = 28/78 (35%)
Frame = +2
Query: 713 PXGGPPPPXXGXXXPXSXXXXXXXXXXXXXXXXXXPGPPXXPPXGPPPSGXLXSXFFPXX 892
P GGPP P P S PGP P G PPSG F P
Sbjct: 402 PSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGP--FNPSGAPPSGGPPGPFNPSG 459
Query: 893 FPSXWGXPPAPXXFSPXG 946
P G PP P F+P G
Sbjct: 460 APPS-GGPPGP--FNPSG 474
Score = 39.1 bits (87), Expect = 0.005
Identities = 27/78 (34%), Positives = 27/78 (34%)
Frame = +2
Query: 713 PXGGPPPPXXGXXXPXSXXXXXXXXXXXXXXXXXXPGPPXXPPXGPPPSGXLXSXFFPXX 892
P GGPP P P S PGP P G PPSG F P
Sbjct: 447 PSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGP--FDPSGAPPSGGPPGPFNPSG 504
Query: 893 FPSXWGXPPAPXXFSPXG 946
P G PP P F P G
Sbjct: 505 APPS-GGPPGP--FDPSG 519
Score = 36.7 bits (81), Expect = 0.025
Identities = 28/79 (35%), Positives = 29/79 (36%), Gaps = 1/79 (1%)
Frame = +2
Query: 713 PXGGPPPPXXGXXXPXSXXXXXXXXXXXXXXXXXXPGPPXXPPXGPPPSGXLXSXFFPXX 892
P GGPP P P S PGP P G PPSG F P
Sbjct: 252 PSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGP--FDPSGAPPSGGPPGPFDPSG 309
Query: 893 F-PSXWGXPPAPXXFSPXG 946
PS G PP P F+P G
Sbjct: 310 AQPS--GGPPGP--FNPSG 324
Score = 36.7 bits (81), Expect = 0.025
Identities = 24/71 (33%), Positives = 24/71 (33%)
Frame = +2
Query: 713 PXGGPPPPXXGXXXPXSXXXXXXXXXXXXXXXXXXPGPPXXPPXGPPPSGXLXSXFFPXX 892
P GGPP P P S PGP P G PPSG F P
Sbjct: 462 PSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGP--FNPSGAPPSGGPPGPFDPSG 519
Query: 893 FPSXWGXPPAP 925
P G PP P
Sbjct: 520 APPS-GMPPVP 529
Score = 35.9 bits (79), Expect = 0.044
Identities = 26/78 (33%), Positives = 26/78 (33%)
Frame = +2
Query: 713 PXGGPPPPXXGXXXPXSXXXXXXXXXXXXXXXXXXPGPPXXPPXGPPPSGXLXSXFFPXX 892
P GGP P P S PGP P G PPSG F P
Sbjct: 207 PSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGP--FDPSGAPPSGGPPGPFNPSG 264
Query: 893 FPSXWGXPPAPXXFSPXG 946
P G PP P F P G
Sbjct: 265 APPS-GGPPGP--FDPSG 279
Score = 35.9 bits (79), Expect = 0.044
Identities = 26/78 (33%), Positives = 26/78 (33%)
Frame = +2
Query: 713 PXGGPPPPXXGXXXPXSXXXXXXXXXXXXXXXXXXPGPPXXPPXGPPPSGXLXSXFFPXX 892
P GGPP P S PGP P G PPSG F P
Sbjct: 297 PSGGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGP--FDPSGAPPSGGPPGPFNPSG 354
Query: 893 FPSXWGXPPAPXXFSPXG 946
P G PP P F P G
Sbjct: 355 APPS-GGPPGP--FDPSG 369
Score = 31.9 bits (69), Expect = 0.72
Identities = 25/78 (32%), Positives = 26/78 (33%)
Frame = +2
Query: 713 PXGGPPPPXXGXXXPXSXXXXXXXXXXXXXXXXXXPGPPXXPPXGPPPSGXLXSXFFPXX 892
P GGPP P S PGP P PPSG F P
Sbjct: 162 PSGGPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGPPGP--FNPSEAPPSGGPTGPFDPSG 219
Query: 893 FPSXWGXPPAPXXFSPXG 946
P G PP P F+P G
Sbjct: 220 APPS-GGPPGP--FNPSG 234
Score = 30.7 bits (66), Expect = 1.7
Identities = 19/43 (44%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +2
Query: 821 GPPXX-PPXGPPPSGXLXSXFFPXXFPSXWGXPPAPXXFSPXG 946
GPP P G PPSG F P P G PP P F P G
Sbjct: 150 GPPGPFDPSGAPPSGGPPGLFDPSGAPPS-GGPPGP--FGPSG 189
Score = 29.9 bits (64), Expect = 2.9
Identities = 20/47 (42%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
Frame = +2
Query: 821 GPPXX-PPXGPPPSGXLXSXFFPXXFPSXWGXPPAPXXFS--PXGGG 952
GPP P G PPSG F P P G PP P S P GG
Sbjct: 165 GPPGLFDPSGAPPSGGPPGPFGPSGAPPS-GGPPGPFNPSEAPPSGG 210
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +2
Query: 827 PXXPPXGPPPSGXLXSXFFPXXFPSXWGXPPAP 925
P PP P PSG P P G PP P
Sbjct: 57 PSSPPPAPRPSGQPPGPQGPSDLPGPSGAPPGP 89
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 34.7 bits (76), Expect = 0.10
Identities = 21/79 (26%), Positives = 24/79 (30%), Gaps = 3/79 (3%)
Frame = +2
Query: 713 PXGGPPPPXXGXXXPXSXXXXXXXXXXXXXXXXXXPGPPXXPPXGPPPSGXLXS---XFF 883
P GPP G P PP PP G PP G + F
Sbjct: 297 PPSGPPSEYGGYAPPQQQQQQFGAPPPQGAPQQGFGAPPQGPPQGGPPQGSFGAPPPQQF 356
Query: 884 PXXFPSXWGXPPAPXXFSP 940
P +G PP P +P
Sbjct: 357 HAPSPQSFGGPPPPVSSAP 375
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.1 bits (67), Expect = 1.3
Identities = 21/71 (29%), Positives = 24/71 (33%), Gaps = 2/71 (2%)
Frame = +2
Query: 719 GGPPPPXXGXXXPX-SXXXXXXXXXXXXXXXXXXPGPPXXPPXGPPPSGXL-XSXFFPXX 892
G PPPP G P + PP PP G PP+G L
Sbjct: 262 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP 321
Query: 893 FPSXWGXPPAP 925
P+ G PP P
Sbjct: 322 PPAGTGSPPPP 332
Score = 29.1 bits (62), Expect = 5.1
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = -3
Query: 948 PPXGEKXXGAG--GXPXKXGXXFGKKXDXSXPEGGGPXGGXXGGP 820
PP G G+ G P + G GK + S GP GG GGP
Sbjct: 344 PPTGSPPTGSPPTGRPPRGGP--GKSSEESSESREGPRGGPRGGP 386
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.1 bits (67), Expect = 1.3
Identities = 21/71 (29%), Positives = 24/71 (33%), Gaps = 2/71 (2%)
Frame = +2
Query: 719 GGPPPPXXGXXXPX-SXXXXXXXXXXXXXXXXXXPGPPXXPPXGPPPSGXL-XSXFFPXX 892
G PPPP G P + PP PP G PP+G L
Sbjct: 283 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP 342
Query: 893 FPSXWGXPPAP 925
P+ G PP P
Sbjct: 343 PPAGTGSPPPP 353
Score = 29.1 bits (62), Expect = 5.1
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = -3
Query: 948 PPXGEKXXGAG--GXPXKXGXXFGKKXDXSXPEGGGPXGGXXGGP 820
PP G G+ G P + G GK + S GP GG GGP
Sbjct: 365 PPTGSPPTGSPPTGRPPRGGP--GKSSEESSESREGPRGGPRGGP 407
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.1 bits (67), Expect = 1.3
Identities = 21/71 (29%), Positives = 24/71 (33%), Gaps = 2/71 (2%)
Frame = +2
Query: 719 GGPPPPXXGXXXPX-SXXXXXXXXXXXXXXXXXXPGPPXXPPXGPPPSGXL-XSXFFPXX 892
G PPPP G P + PP PP G PP+G L
Sbjct: 268 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP 327
Query: 893 FPSXWGXPPAP 925
P+ G PP P
Sbjct: 328 PPAGTGSPPPP 338
Score = 29.1 bits (62), Expect = 5.1
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = -3
Query: 948 PPXGEKXXGAG--GXPXKXGXXFGKKXDXSXPEGGGPXGGXXGGP 820
PP G G+ G P + G GK + S GP GG GGP
Sbjct: 350 PPTGSPPTGSPPTGRPPRGGP--GKSSEESSESREGPRGGPRGGP 392
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +2
Query: 818 PGPPXXPPXGPPPSGXLXSXFFPXXFPSXWGXPPAPXXFSP 940
PGP PP GPP + P + +G P AP + P
Sbjct: 232 PGPSMGPPMGPPMGPPMGHPQAP-QYGQNYGQPVAPQQYKP 271
>Z75549-6|CAC42343.1| 74|Caenorhabditis elegans Hypothetical
protein T19C4.7 protein.
Length = 74
Score = 29.9 bits (64), Expect = 2.9
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -3
Query: 945 PXGEKXXGAGGXPXKXGXXFGKKXDXSXPEGGGPXGGXXGGP 820
P G G GG P G + ++ GGGP GG GGP
Sbjct: 28 PYGGYGGGYGGGPWGYGGGWRRRHWGGY--GGGPWGGYGGGP 67
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = +2
Query: 818 PGPPXXPPXGPP-PSGXLXSXFFPXXFPSXWGXPPAP 925
P PP PP PSG + P +P G PPAP
Sbjct: 133 PPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRGYPPAP 169
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = +2
Query: 818 PGPPXXPPXGPP-PSGXLXSXFFPXXFPSXWGXPPAP 925
P PP PP PSG + P +P G PPAP
Sbjct: 133 PPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRGYPPAP 169
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 29.5 bits (63), Expect = 3.8
Identities = 19/45 (42%), Positives = 19/45 (42%)
Frame = +2
Query: 821 GPPXXPPXGPPPSGXLXSXFFPXXFPSXWGXPPAPXXFSPXGGGG 955
GPP PP P PSG S P P G P AP P G G
Sbjct: 151 GPPG-PPGPPGPSGDAGSNGNPGS-PGQDGQPGAPGNKGPSGQNG 193
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +2
Query: 719 GGPPPPXXGXXXPXSXXXXXXXXXXXXXXXXXXPGPPXXPPXGPPP 856
G PPPP G P S P PP GPPP
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 29.1 bits (62), Expect = 5.1
Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Frame = +2
Query: 821 GPPXXPPXG--PPPSGXLXSXFFPXXFPSXWGXPPAPXXFSPXGG 949
GPP PP G PP +G P P G PP P P GG
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP--PPPGG 767
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +2
Query: 719 GGPPPPXXGXXXPXSXXXXXXXXXXXXXXXXXXPGPPXXPPXGPPP 856
G PPPP G P S P PP GPPP
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 29.1 bits (62), Expect = 5.1
Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Frame = +2
Query: 821 GPPXXPPXG--PPPSGXLXSXFFPXXFPSXWGXPPAPXXFSPXGG 949
GPP PP G PP +G P P G PP P P GG
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP--PPPGG 767
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +2
Query: 719 GGPPPPXXGXXXPXSXXXXXXXXXXXXXXXXXXPGPPXXPPXGPPP 856
G PPPP G P S P PP GPPP
Sbjct: 324 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 369
Score = 29.1 bits (62), Expect = 5.1
Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Frame = +2
Query: 821 GPPXXPPXG--PPPSGXLXSXFFPXXFPSXWGXPPAPXXFSPXGG 949
GPP PP G PP +G P P G PP P P GG
Sbjct: 308 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP--PPPGG 350
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.5 bits (63), Expect = 3.8
Identities = 23/79 (29%), Positives = 25/79 (31%), Gaps = 2/79 (2%)
Frame = -3
Query: 954 PPPPXGEKXXGAGGXPXKXGXXFGKKXDXSXPEGGGPXG--GXXGGPGXXXXXXXXXXXX 781
PP P G+ G P G G + P G G G G GGPG
Sbjct: 259 PPGPPGQDGSGGAAQPGPPGPP-GPPGNDGQPGGPGQPGGPGQDGGPGTDAAYCPCPPRT 317
Query: 780 XXXXXPXQGXKXPXXGGGG 724
G P GGGG
Sbjct: 318 PAGGGG--GGDFPAGGGGG 334
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.1 bits (62), Expect = 5.1
Identities = 16/48 (33%), Positives = 16/48 (33%), Gaps = 2/48 (4%)
Frame = +2
Query: 725 PPPPXXGXXXPXSXXXXXXXXXXXXXXXXXXPGPPXX--PPXGPPPSG 862
PPPP G P P PP PP PPPSG
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSG 122
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = +2
Query: 824 PPXXPPXGPPPSGXLXSXFFPXXFPSXWGXPPAPXXF 934
PP P G PP + + P P G PP P F
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMF 111
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -1
Query: 311 FPXXPGGGGGXXXRXXXXGXXPXXPPXGGXVXTPP 207
FP GGGGG P PP G PP
Sbjct: 20 FPMAGGGGGGGGCAPAAPACAPPPPPMCGCAPPPP 54
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 28.7 bits (61), Expect = 6.7
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -3
Query: 939 GEKXXGAGGXPXKXGXXFGKKXDXSXPEGGGPXGGXXGGPG 817
G G GG P G G GGG GG GG G
Sbjct: 36 GGNRWGGGGGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGG 76
>Z81472-1|CAB03889.1| 173|Caenorhabditis elegans Hypothetical
protein C16D6.1 protein.
Length = 173
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +2
Query: 821 GPPXXPPXGPPPSGXLXSXFFPXXFP 898
GPP PP GPPP L + P P
Sbjct: 68 GPPGPPPHGPPPPHLLHALPHPAYPP 93
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,078,939
Number of Sequences: 27780
Number of extensions: 285705
Number of successful extensions: 1259
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1105
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2552786072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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