Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_F09
         (899 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           23   3.3  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   4.3  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   4.3  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   5.7  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   7.5  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   7.5  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   9.9  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = -3

Query: 489 KGLRAQARLVDVRAAEQSRPERRAGLHF-RWPGVRPPVLKATHGVWLGPSQRRWR 328
           +GL+ Q  +  +RA E+    R  GL   R  GV    LK     W G  Q++WR
Sbjct: 152 EGLKRQNPVKFLRAIEEYG--RFFGLDSQRLLGVAMDCLKGNAKHWTGIFQKKWR 204


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 469 RLRPQPFPQHLSTSRAPLDL 528
           RL    F +HL+++RAPL L
Sbjct: 395 RLLRHNFNRHLNSNRAPLGL 414


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 469 RLRPQPFPQHLSTSRAPLDL 528
           RL    F +HL+++RAPL L
Sbjct: 402 RLLRHNFNRHLNSNRAPLGL 421


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +1

Query: 211 NEVTSHRSRSSKSRVALGYRPQNLTFLAKQRNES 312
           N   S   R+++    + +RP+N + L K  N+S
Sbjct: 387 NSCRSSTFRNNRDEYNVCFRPRNNSILIKNFNDS 420


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/22 (31%), Positives = 10/22 (45%)
 Frame = -2

Query: 358 LARSVSTSMAICRRTCFRSSVW 293
           L     TS+A C   C   ++W
Sbjct: 57  LVEDEETSLATCNMLCSEPAIW 78


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = -1

Query: 347 RLNVDGDMSPDMLSFLCLARNVRFCGLXPRATRDF 243
           +L VDG  S + +  +C+  + + C +     R F
Sbjct: 500 KLIVDGKKSEEQIVDICIRSHDKLCDVCDSVNRIF 534


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 334 STLRRTEPNSMRCFQHRR 387
           S+LR TEP     FQ+RR
Sbjct: 150 SSLRLTEPQVKIWFQNRR 167


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,545
Number of Sequences: 336
Number of extensions: 3627
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25030786
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)