Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_F09
         (899 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox transcrip...    27   0.59 
AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding pr...    24   7.2  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   9.6  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    23   9.6  
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    23   9.6  

>AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox
           transcription factor protein.
          Length = 185

 Score = 27.5 bits (58), Expect = 0.59
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
 Frame = -2

Query: 766 HPAESKSFL---FVPHRTIHLRKSFHFLQPINR 677
           HP ES       +  H+TI L K FHF + +NR
Sbjct: 1   HPKESSKRTRQSYSRHQTIELEKEFHFNRYLNR 33


>AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding
           protein OBPjj5a protein.
          Length = 272

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -2

Query: 370 NAWSLARSVSTSMAICRRTCFRSSVWRE 287
           N  + AR   +S   CRR C++  ++ E
Sbjct: 151 NCRTAARRNHSSRNTCRRNCYQQCIYEE 178


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
            gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 4/59 (6%)
 Frame = +2

Query: 491  RNTCRPLGRRSTLVRRK----IGASPRPPAAASTILSTNS*KEKMRLHQNRLSEKKKEG 655
            RN  R   RR+   RR+     G  P PPA+  T     + +E+    + R   ++  G
Sbjct: 1107 RNERRNANRRAATARRREERRAGLPPTPPASPRTAQRRAALRERQARFRERRRNRRLLG 1165


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 9/28 (32%), Positives = 11/28 (39%)
 Frame = +3

Query: 801 CWTHNSKTIFCDRHECXSPQASSKXFFF 884
           CW  N     C  +EC S   +    FF
Sbjct: 116 CWGSNDDQESCSSNECVSTTETPTRHFF 143


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -2

Query: 805 QQRKMEGQQVLRSHPAESKSFLFVPH 728
           QQ++ + QQ+L+ HP        +PH
Sbjct: 59  QQQQQQQQQLLQQHPPSVFPHAALPH 84


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 811,999
Number of Sequences: 2352
Number of extensions: 15484
Number of successful extensions: 32
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97160985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)