Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_F08
         (889 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   2.4  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   4.2  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   5.6  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    22   5.6  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   5.6  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +1

Query: 409 SLLVSLPLQIKHLLTWREVLKKLLYQLPVLMPPCLLWV 522
           S L  L  ++KH+L W+   +  ++    L    LLW+
Sbjct: 109 SKLHKLDNKLKHMLIWKSYKRTQIFITCELFFVILLWI 146


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 5/13 (38%), Positives = 11/13 (84%)
 Frame = +3

Query: 87  WSVIQQIFYNLPR 125
           W+++Q +F+ +PR
Sbjct: 213 WTILQTVFFTVPR 225


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +2

Query: 719 VVLNKTSXPASTXCCQXCG 775
           V+L+K     +  CC+ CG
Sbjct: 228 VILSKVKSILNKKCCEKCG 246


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -3

Query: 512 KHGGISTGS*YNNFFSTSLQVSRCFICSGKD 420
           KH  I        FF  S++ +R ++C  KD
Sbjct: 48  KHYNIFACDGCAGFFKRSIRRNRQYVCKAKD 78


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -3

Query: 512 KHGGISTGS*YNNFFSTSLQVSRCFICSGKD 420
           KH  I        FF  S++ +R ++C  KD
Sbjct: 48  KHYNIFACDGCAGFFKRSIRRNRQYVCKAKD 78


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,807
Number of Sequences: 336
Number of extensions: 4111
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24617054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)