Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_F06
         (889 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1HPN9 Cluster: Copper transporter; n=1; Bombyx mori|Re...    81   3e-14
UniRef50_UPI00015B4C2C Cluster: PREDICTED: similar to high-affin...    37   0.79 
UniRef50_UPI0000514FF8 Cluster: PREDICTED: similar to Copper tra...    33   9.7  

>UniRef50_Q1HPN9 Cluster: Copper transporter; n=1; Bombyx mori|Rep:
           Copper transporter - Bombyx mori (Silk moth)
          Length = 181

 Score = 81.4 bits (192), Expect = 3e-14
 Identities = 37/55 (67%), Positives = 38/55 (69%)
 Frame = +2

Query: 266 GHDHSHAMVFHSCVCTEILFQGXKXXNALELFGSTXXIXLXXXFYXXFKXYKETL 430
           GHDHSHAMVFHSCVCTEILFQG K  NALEL GS   I L    Y   K Y+E L
Sbjct: 24  GHDHSHAMVFHSCVCTEILFQGWKTTNALELLGSAVAIFLAGVLYEGLKYYREAL 78


>UniRef50_UPI00015B4C2C Cluster: PREDICTED: similar to high-affinity
           copper uptake protein; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to high-affinity copper uptake
           protein - Nasonia vitripennis
          Length = 262

 Score = 36.7 bits (81), Expect = 0.79
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = +2

Query: 260 ALGHD-HSHAMVFHSCVCTEILFQGXKXXNALELFGSTXXIXLXXXFYXXFKXYKETL 430
           A+ H  H  +M FH   C +ILF+  +  +   L GS   I +    Y   K Y+E L
Sbjct: 109 AMSHAMHGMSMAFHGGYCEKILFETWQISSVAGLIGSVIGIVIMSALYEGLKYYREYL 166


>UniRef50_UPI0000514FF8 Cluster: PREDICTED: similar to Copper
           transporter 1A CG3977-PA isoform 1; n=1; Apis
           mellifera|Rep: PREDICTED: similar to Copper transporter
           1A CG3977-PA isoform 1 - Apis mellifera
          Length = 223

 Score = 33.1 bits (72), Expect = 9.7
 Identities = 17/56 (30%), Positives = 23/56 (41%)
 Frame = +2

Query: 263 LGHDHSHAMVFHSCVCTEILFQGXKXXNALELFGSTXXIXLXXXFYXXFKXYKETL 430
           +G      M FH   C  +LF+  K  +   L GS   I +    Y   K Y+E L
Sbjct: 62  MGMHGMSTMWFHGGYCEHVLFESWKITSISGLIGSMVGIMIMAALYEGLKYYREYL 117


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 416,985,651
Number of Sequences: 1657284
Number of extensions: 4771179
Number of successful extensions: 9058
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9055
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79932179145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)