Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_F04
         (895 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0610 - 25449085-25453284                                         31   0.94 
02_05_0686 - 30900748-30902167,30903442-30904742                       30   2.2  
09_06_0123 - 20997498-20997512,20998015-20998100,20999066-209991...    29   3.8  
10_08_0608 + 19184722-19185224,19185331-19185410,19186048-191862...    29   5.0  
01_05_0490 + 22672241-22674679                                         29   6.6  
07_03_1433 + 26513728-26514135,26525534-26526280                       28   8.7  
06_02_0120 + 12055076-12055175,12055322-12055725                       28   8.7  

>11_06_0610 - 25449085-25453284
          Length = 1399

 Score = 31.5 bits (68), Expect = 0.94
 Identities = 29/115 (25%), Positives = 32/115 (27%), Gaps = 5/115 (4%)
 Frame = -3

Query: 695 PXGXTXPXPXXXXXXPXXXXGARPXXG-G*PPXPXXPXXPPXAGNRXPRPXXXRXRXXXS 519
           P G + P P      P    G  P      PP    P  P    +  P P         S
Sbjct: 551 PEGKSPPTPTASHSPPPVPEGHTPSPPKSGPPAGESPPTPESKASPPPTPEEYTPSPPKS 610

Query: 518 GGPXAXEXPKXEXXAXXXXXXXXPGRXPDPXXPXTPPT----PXPEXWGLKRMPP 366
             P     P  E  A         G  P P    TPP+    P PE       PP
Sbjct: 611 TPPAEKSPPTPESKASSPPPPAPEGHTPSP-PESTPPSEKSPPTPESKASSPPPP 664


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 13/33 (39%), Positives = 14/33 (42%)
 Frame = -2

Query: 582 PPXCGEPXPPPXXXPXPXXRIRGPEXGRXPXXG 484
           PP  G P PPP   P P    +GP     P  G
Sbjct: 339 PPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPG 371


>09_06_0123 -
           20997498-20997512,20998015-20998100,20999066-20999198,
           20999264-20999341,21000130-21000216,21001164-21001254,
           21001338-21001488,21001567-21002296,21002404-21002820
          Length = 595

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 13/36 (36%), Positives = 13/36 (36%)
 Frame = -2

Query: 600 PXXXXXPPXCGEPXPPPXXXPXPXXRIRGPEXGRXP 493
           P     PP    P PPP         I GPE  R P
Sbjct: 10  PTQLPPPPVAASPSPPPLAAAAAAAAIAGPEGDRAP 45


>10_08_0608 +
           19184722-19185224,19185331-19185410,19186048-19186235,
           19187021-19187927,19188015-19188142,19189270-19189356,
           19189422-19189472,19189582-19189668,19189746-19189873,
           19190469-19190608,19190721-19190882,19190964-19192733,
           19192807-19192922,19193077-19193227,19193243-19193371,
           19193598-19194139
          Length = 1722

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 14/32 (43%), Positives = 14/32 (43%)
 Frame = -1

Query: 607 PXSPXXPXXPPLRGTXXPAPEXXXPAXPXPGA 512
           P  P  P  P LRG   P P    P  P PGA
Sbjct: 38  PLEPAPPSTPQLRGEASPPPPPPPPVGP-PGA 68


>01_05_0490 + 22672241-22674679
          Length = 812

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 20/81 (24%), Positives = 23/81 (28%)
 Frame = -3

Query: 608 PPXPXXPXXPPXAGNRXPRPXXXRXRXXXSGGPXAXEXPKXEXXAXXXXXXXXPGRXPDP 429
           PP P  P  PP    R  +P     R      P   + P                    P
Sbjct: 638 PPQPPPP--PPPTTRRSRKPPQPPSRPAPPPPPPPQQQPPFYPRRAVVYYTYPLPPPSPP 695

Query: 428 XXPXTPPTPXPEXWGLKRMPP 366
             P  PP P P   G +  PP
Sbjct: 696 LPPPPPPPPPPMSEGEEEAPP 716


>07_03_1433 + 26513728-26514135,26525534-26526280
          Length = 384

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 13/33 (39%), Positives = 14/33 (42%)
 Frame = -1

Query: 607 PXSPXXPXXPPLRGTXXPAPEXXXPAXPXPGAR 509
           P SP  P   P   T  P P    P+ P PG R
Sbjct: 60  PVSPSPPTTYPPPSTTPPNPAPTSPSPPAPGLR 92


>06_02_0120 + 12055076-12055175,12055322-12055725
          Length = 167

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 14/32 (43%), Positives = 14/32 (43%)
 Frame = +2

Query: 512 GPRXRXXGXGXLXGGGXGSPQXGGXXXXXGXG 607
           GP     G G   GGG GSP  GG     G G
Sbjct: 93  GPGYGGGGSGPGYGGGYGSPGYGGGYGSPGYG 124


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,176,640
Number of Sequences: 37544
Number of extensions: 207297
Number of successful extensions: 1513
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1352
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)