BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_F03
(775 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF439708-1|ABO38128.1| 1051|Drosophila melanogaster Ephexin prot... 24 3.6
AF145619-1|AAD38594.1| 1051|Drosophila melanogaster BcDNA.GH0369... 24 3.6
AE014296-2852|AAN11725.1| 1051|Drosophila melanogaster CG3799-PC... 24 3.6
AE014296-2851|AAN11724.1| 1051|Drosophila melanogaster CG3799-PB... 24 3.6
AE014296-2850|AAF49386.1| 1051|Drosophila melanogaster CG3799-PA... 24 3.6
>EF439708-1|ABO38128.1| 1051|Drosophila melanogaster Ephexin
protein.
Length = 1051
Score = 24.2 bits (50), Expect(2) = 3.6
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 466 GXXXNXPPPPPP 501
G N PPPPPP
Sbjct: 397 GLRPNDPPPPPP 408
Score = 24.2 bits (50), Expect(2) = 3.6
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +1
Query: 484 PPPPPPXXXXGXPXXPXXE 540
PPPPPP P P E
Sbjct: 404 PPPPPPMTGNKSPLDPERE 422
>AF145619-1|AAD38594.1| 1051|Drosophila melanogaster BcDNA.GH03693
protein.
Length = 1051
Score = 24.2 bits (50), Expect(2) = 3.6
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 466 GXXXNXPPPPPP 501
G N PPPPPP
Sbjct: 397 GLRPNDPPPPPP 408
Score = 24.2 bits (50), Expect(2) = 3.6
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +1
Query: 484 PPPPPPXXXXGXPXXPXXE 540
PPPPPP P P E
Sbjct: 404 PPPPPPMTGNKSPLDPERE 422
>AE014296-2852|AAN11725.1| 1051|Drosophila melanogaster CG3799-PC,
isoform C protein.
Length = 1051
Score = 24.2 bits (50), Expect(2) = 3.6
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 466 GXXXNXPPPPPP 501
G N PPPPPP
Sbjct: 397 GLRPNDPPPPPP 408
Score = 24.2 bits (50), Expect(2) = 3.6
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +1
Query: 484 PPPPPPXXXXGXPXXPXXE 540
PPPPPP P P E
Sbjct: 404 PPPPPPMTGNKSPLDPERE 422
>AE014296-2851|AAN11724.1| 1051|Drosophila melanogaster CG3799-PB,
isoform B protein.
Length = 1051
Score = 24.2 bits (50), Expect(2) = 3.6
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 466 GXXXNXPPPPPP 501
G N PPPPPP
Sbjct: 397 GLRPNDPPPPPP 408
Score = 24.2 bits (50), Expect(2) = 3.6
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +1
Query: 484 PPPPPPXXXXGXPXXPXXE 540
PPPPPP P P E
Sbjct: 404 PPPPPPMTGNKSPLDPERE 422
>AE014296-2850|AAF49386.1| 1051|Drosophila melanogaster CG3799-PA,
isoform A protein.
Length = 1051
Score = 24.2 bits (50), Expect(2) = 3.6
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 466 GXXXNXPPPPPP 501
G N PPPPPP
Sbjct: 397 GLRPNDPPPPPP 408
Score = 24.2 bits (50), Expect(2) = 3.6
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +1
Query: 484 PPPPPPXXXXGXPXXPXXE 540
PPPPPP P P E
Sbjct: 404 PPPPPPMTGNKSPLDPERE 422
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,882,834
Number of Sequences: 53049
Number of extensions: 282662
Number of successful extensions: 3953
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3308
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3581842374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -