Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_F02
(897 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 40 6e-04
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 38 0.003
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 36 0.008
SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual 34 0.024
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 33 0.042
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 33 0.042
SPBC337.11 |||mitochondrial peptidase |Schizosaccharomyces pombe... 33 0.073
SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase |S... 31 0.17
SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar... 31 0.22
SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces pom... 31 0.29
SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr 1|||M... 30 0.39
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 29 0.68
SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pomb... 29 0.68
SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces po... 28 1.6
SPAC1783.07c |pap1|caf3, caf3|transcription factor Caf3|Schizosa... 27 3.6
SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces ... 26 6.3
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 39.5 bits (88), Expect = 6e-04
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +3
Query: 330 LRGKVVLITGASSGIGXALAHVFYGQGCKIILASRXXKKLQRXKQDL 470
L GKV L+TG+S GIG A +G K+ LA R +K Q+ + +
Sbjct: 40 LTGKVALVTGSSGGIGYVTALELARKGAKVYLAGRNEEKYQKVMKQI 86
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 37.5 bits (83), Expect = 0.003
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +3
Query: 324 STLRGKVVLITGASSGIGXALA-HVFYGQGCKIILASRXXKKLQRXKQDLISR 479
S L GK +LITGASSGIG + A + K+ILA+R ++ ++L S+
Sbjct: 2 SRLDGKTILITGASSGIGKSTAFEIAKVAKVKLILAARRFSTVEEIAKELESK 54
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 35.9 bits (79), Expect = 0.008
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 327 TLRGKVVLITGASSGIGXALAHVFYGQGCKI-ILASRXXKKLQ 452
+L+GK LITG S GIG ++A F G + +L R K L+
Sbjct: 6 SLKGKTTLITGGSGGIGFSIAKAFAAAGSNVGLLYGRNKKALE 48
>SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual
Length = 503
Score = 34.3 bits (75), Expect = 0.024
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 345 VLITGASSGIGXALAHVFYGQGCKIILASRXXKKLQRXKQDLISRKV 485
+L+TG S G+G A+A +G + + +R KLQ +L K+
Sbjct: 25 ILVTGGSQGLGKAIAKELVLRGANVTIVARTVTKLQEAVAELSDSKI 71
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 33.5 bits (73), Expect = 0.042
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +3
Query: 345 VLITGASSGIGXALAHVFYGQGCKIILASRXXKKLQRXKQDLISRKV 485
VLITG+S G+G AL V QG +I SR + L+ K+
Sbjct: 8 VLITGSSKGLGYALVKVGLAQGYNVIACSRAPDTITIEHSKLLKLKL 54
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 33.5 bits (73), Expect = 0.042
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +3
Query: 327 TLRGKVVLITGASSGIGXALAHVFYGQGCKI 419
T+ G+VVLITGA+ GIG L +F G ++
Sbjct: 2 TVEGRVVLITGAAGGIGKVLCKMFTELGDRV 32
>SPBC337.11 |||mitochondrial peptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 325
Score = 32.7 bits (71), Expect = 0.073
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = +3
Query: 252 IGVPFVVGVTMYGVINHLLQKKRRSTLRGKVVLITGASSGIGXALAHVFYGQGCKIILAS 431
+GVPF T Y L R T +VL+ GA +G A+ + GCK+I S
Sbjct: 130 VGVPFT---TAY------LALSRGETKGSDIVLVVGALGAVGSAVCQIAEDWGCKVITVS 180
Query: 432 R 434
R
Sbjct: 181 R 181
>SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 31.5 bits (68), Expect = 0.17
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +3
Query: 339 KVVLITGASSG-IGXALAHVFYGQGCKIILASRXXKKL 449
K VLITG S G IG ALA F+ +G +++ +R +++
Sbjct: 5 KFVLITGCSEGGIGNALALKFHQEGFQVLATARQVERM 42
>SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 31.1 bits (67), Expect = 0.22
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = +3
Query: 345 VLITGASSGIGXALAHVFYGQGCKIILASRXXKKLQRXKQDLISRKVAXQTXXXXXLXXN 524
VLITG SSG+G +A ++ +G + + R L+ Q L K T + +
Sbjct: 4 VLITGGSSGLGKRIAQIWSQKGHQCHIVGRNEFHLKETLQSLSVAKGQQHTLTIADVQSD 63
Query: 525 LXDINXIY 548
+ ++ I+
Sbjct: 64 MKNLKSIF 71
>SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 397
Score = 30.7 bits (66), Expect = 0.29
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 330 LRGKVVLITGASSGIGXALAHVFYGQGCKIILASR 434
+ G VV++TG SSGIG + G ++++ R
Sbjct: 73 MNGMVVMVTGGSSGIGQVVVEKLASLGAQVVILLR 107
>SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 30.3 bits (65), Expect = 0.39
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +3
Query: 333 RGKVVLITGASSGIGXALAHVFYGQGCKIILASRXXKKLQRXKQDL 470
+G ++TGA+ GIG A G ++L SR +KL ++L
Sbjct: 56 KGYWAVVTGATDGIGKEYATQLAMSGFNVVLISRTQEKLDALAKEL 101
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 29.5 bits (63), Expect = 0.68
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 330 LRGKVVLITGASSGIGXALAHVFYGQGCKIILASRXXKKLQ-RXKQDLISRK 482
L K L+TG SGIG A A +F +G ++++ ++ +DLI R+
Sbjct: 40 LAEKKTLLTGGDSGIGKAAAVMFAREGSDLVISCLPEERDDAEVTRDLIERE 91
>SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 247
Score = 29.5 bits (63), Expect = 0.68
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 339 KVVLITGASSGIGXALAHVFYGQGCKIILASR 434
KV+L+TG+S GIG A A + K+I SR
Sbjct: 7 KVILLTGSSKGIGLATAEALQ-KKAKVIAVSR 37
>SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 261
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 327 TLRGKVVLITGASSGIGXALAHVFYGQGCKIIL 425
+L+GK ++ GA+ GIG ++A F G +I+
Sbjct: 18 SLKGKNCVVFGAAKGIGFSIATAFAQAGGNVII 50
>SPAC1783.07c |pap1|caf3, caf3|transcription factor
Caf3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 552
Score = 27.1 bits (57), Expect = 3.6
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -1
Query: 108 EARGQTRHKXXNXKNKGQRPKXERKARSREA 16
E G + K KN Q P +RKA++R A
Sbjct: 59 EVDGDVKPKKIGRKNSDQEPSSKRKAQNRAA 89
>SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 261
Score = 26.2 bits (55), Expect = 6.3
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 327 TLRGKVVLITGASSGIGXALAHVFYGQGCKIIL 425
+L+GK ++ G + GIG A+ VF G +
Sbjct: 18 SLKGKNAVVFGGARGIGHAICSVFAEAGANAFI 50
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,079,255
Number of Sequences: 5004
Number of extensions: 33889
Number of successful extensions: 71
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 71
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 452494940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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