Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_E24
         (918 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX538020-1|CAD97966.1| 1510|Homo sapiens hypothetical protein pr...    31   4.4  
AB023164-1|BAA76791.3| 2330|Homo sapiens KIAA0947 protein protein.     31   4.4  

>BX538020-1|CAD97966.1| 1510|Homo sapiens hypothetical protein
            protein.
          Length = 1510

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 17/54 (31%), Positives = 24/54 (44%)
 Frame = -1

Query: 540  PLSGXITVAAPERPXAGXX*XXKPEEXPIRQPPFPAXWPIX*XQXKPPXPXPEP 379
            PLS  I+ ++P  P +         E P+  PP  + WP    +  PP P P P
Sbjct: 893  PLSPLISSSSPSSPASPVGQVSPFRETPV--PPAMSPWPEDPRRASPPDPSPSP 944


>AB023164-1|BAA76791.3| 2330|Homo sapiens KIAA0947 protein protein.
          Length = 2330

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 17/54 (31%), Positives = 24/54 (44%)
 Frame = -1

Query: 540  PLSGXITVAAPERPXAGXX*XXKPEEXPIRQPPFPAXWPIX*XQXKPPXPXPEP 379
            PLS  I+ ++P  P +         E P+  PP  + WP    +  PP P P P
Sbjct: 1713 PLSPLISSSSPSSPASPVGQVSPFRETPV--PPAMSPWPEDPRRASPPDPSPSP 1764


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,423,369
Number of Sequences: 237096
Number of extensions: 764603
Number of successful extensions: 1341
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1336
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11936890730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)